RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 PCDHB15Q9Y5E8 787 aa28.84■■■□□ 2.21
RBFOX1-206ENST00000535565 MYH14Q7Z406 1995 aaKnown RBP28.84■■■□□ 2.21
RBFOX1-206ENST00000535565 ALDH1L1O75891 902 aa28.84■■■□□ 2.21
RBFOX1-206ENST00000535565 GNAI3P08754 354 aa28.84■■■□□ 2.21
RBFOX1-206ENST00000535565 KIF6Q6ZMV9 814 aa28.84■■■□□ 2.21
RBFOX1-206ENST00000535565 LINS1Q8NG48 757 aa28.84■■■□□ 2.21
RBFOX1-206ENST00000535565 MEIS3Q99687 375 aa28.84■■■□□ 2.21
RBFOX1-206ENST00000535565 TTLL7Q6ZT98 887 aa28.83■■■□□ 2.21
RBFOX1-206ENST00000535565 INTS5Q6P9B9 1019 aaKnown RBP28.82■■■□□ 2.2
RBFOX1-206ENST00000535565 CENPQQ7L2Z9 268 aaPredicted RBP28.8■■■□□ 2.2
RBFOX1-206ENST00000535565 LINC00116Q8NCU8 138 aa28.8■■■□□ 2.2
RBFOX1-206ENST00000535565 RWDD1Q9H446 243 aaPredicted RBP28.8■■■□□ 2.2
RBFOX1-206ENST00000535565 CNTNAP4Q9C0A0 1308 aa28.8■■■□□ 2.2
RBFOX1-206ENST00000535565 IBTKQ9P2D0 1353 aaPredicted RBP28.79■■■□□ 2.2
RBFOX1-206ENST00000535565 MYD88Q99836 296 aa28.79■■■□□ 2.2
RBFOX1-206ENST00000535565 C1orf115Q9H7X2 142 aa28.79■■■□□ 2.2
RBFOX1-206ENST00000535565 ZBTB3Q9H5J0 574 aa28.79■■■□□ 2.2
RBFOX1-206ENST00000535565 ARXQ96QS3 562 aa28.78■■■□□ 2.2
RBFOX1-206ENST00000535565 USP44Q9H0E7 712 aa28.78■■■□□ 2.2
RBFOX1-206ENST00000535565 KDM2BQ8NHM5 1336 aa28.78■■■□□ 2.2
RBFOX1-206ENST00000535565 GNAI2P04899 355 aa28.77■■■□□ 2.2
RBFOX1-206ENST00000535565 UBTFL1P0CB47 393 aaPredicted RBP28.77■■■□□ 2.2
RBFOX1-206ENST00000535565 EIF5P55010 431 aaKnown RBP28.77■■■□□ 2.2
RBFOX1-206ENST00000535565 KCNQ4P56696 695 aa28.77■■■□□ 2.2
RBFOX1-206ENST00000535565 CWF19L2Q2TBE0 894 aaKnown RBP28.77■■■□□ 2.2
RBFOX1-206ENST00000535565 MAP3K15Q6ZN16 1313 aa28.77■■■□□ 2.2
RBFOX1-206ENST00000535565 RC3H1Q5TC82 1133 aaKnown RBP28.76■■■□□ 2.19
RBFOX1-206ENST00000535565 C4BP0C0L5 1744 aa28.76■■■□□ 2.19
RBFOX1-206ENST00000535565 ANKRD36CQ5JPF3 1778 aa28.75■■■□□ 2.19
RBFOX1-206ENST00000535565 NEURL1BA8MQ27 555 aa28.75■■■□□ 2.19
RBFOX1-206ENST00000535565 IGKV5-2P06315 115 aa28.75■■■□□ 2.19
RBFOX1-206ENST00000535565 HDAC1Q13547 482 aaPredicted RBP28.75■■■□□ 2.19
RBFOX1-206ENST00000535565 SLC27A3Q5K4L6 730 aa28.75■■■□□ 2.19
RBFOX1-206ENST00000535565 C9orf78Q9NZ63 289 aaPredicted RBP28.75■■■□□ 2.19
RBFOX1-206ENST00000535565 TNS1Q9HBL0 1735 aaKnown RBP28.75■■■□□ 2.19
RBFOX1-206ENST00000535565 EP400Q96L91 3159 aa28.75■■■□□ 2.19
RBFOX1-206ENST00000535565 IGHDP01880 384 aa28.75■■■□□ 2.19
RBFOX1-206ENST00000535565 HMGB2P26583 209 aaKnown RBP28.75■■■□□ 2.19
RBFOX1-206ENST00000535565 DZIP3Q86Y13 1208 aaKnown RBP28.75■■■□□ 2.19
RBFOX1-206ENST00000535565 HDAC5Q9UQL6 1122 aa28.75■■■□□ 2.19
RBFOX1-206ENST00000535565 NUP98P52948 1817 aa28.74■■■□□ 2.19
RBFOX1-206ENST00000535565 COL15A1P39059 1388 aa28.73■■■□□ 2.19
RBFOX1-206ENST00000535565 RPAP2Q8IXW5 612 aaPredicted RBP28.72■■■□□ 2.19
RBFOX1-206ENST00000535565 A0A087WZG4 1122 aa28.71■■■□□ 2.19
RBFOX1-206ENST00000535565 ERVV-1B6SEH8 477 aa28.71■■■□□ 2.19
RBFOX1-206ENST00000535565 GRM8O00222 908 aa28.71■■■□□ 2.19
RBFOX1-206ENST00000535565 GCKRQ14397 625 aa28.71■■■□□ 2.19
RBFOX1-206ENST00000535565 HSP90AB3PQ58FF7 597 aa28.71■■■□□ 2.19
RBFOX1-206ENST00000535565 RGPD3A6NKT7 1758 aaPredicted RBP28.71■■■□□ 2.19
RBFOX1-206ENST00000535565 RGPD4Q7Z3J3 1758 aa28.71■■■□□ 2.19
RBFOX1-206ENST00000535565 GIGYF2Q6Y7W6 1299 aaKnown RBP28.71■■■□□ 2.19
RBFOX1-206ENST00000535565 BCORQ6W2J9 1755 aa28.7■■■□□ 2.19
RBFOX1-206ENST00000535565 ATP5J2-PTCD1G3V325 749 aa28.7■■■□□ 2.18
RBFOX1-206ENST00000535565 PLSCR1O15162 318 aa28.7■■■□□ 2.18
RBFOX1-206ENST00000535565 APBA3O96018 575 aa28.7■■■□□ 2.18
RBFOX1-206ENST00000535565 NBPF7P0C2Y1 421 aaPredicted RBP28.7■■■□□ 2.18
RBFOX1-206ENST00000535565 TCIRG1Q13488 830 aa28.7■■■□□ 2.18
RBFOX1-206ENST00000535565 ANKRD44Q8N8A2 993 aa28.7■■■□□ 2.18
RBFOX1-206ENST00000535565 TBC1D2BQ9UPU7 963 aa28.7■■■□□ 2.18
RBFOX1-206ENST00000535565 LRRFIP2Q9Y608 721 aaKnown RBP28.7■■■□□ 2.18
RBFOX1-206ENST00000535565 UTYO14607 1347 aa28.69■■■□□ 2.18
RBFOX1-206ENST00000535565 CEP85Q6P2H3 762 aa28.69■■■□□ 2.18
RBFOX1-206ENST00000535565 RPS6KA4O75676 772 aa28.68■■■□□ 2.18
RBFOX1-206ENST00000535565 CCDC191Q8NCU4 936 aa28.68■■■□□ 2.18
RBFOX1-206ENST00000535565 CWC25Q9NXE8 425 aaPredicted RBP28.68■■■□□ 2.18
RBFOX1-206ENST00000535565 GNPATO15228 680 aa28.67■■■□□ 2.18
RBFOX1-206ENST00000535565 LRRC4BQ9NT99 713 aa28.67■■■□□ 2.18
RBFOX1-206ENST00000535565 HMMRO75330 724 aa28.67■■■□□ 2.18
RBFOX1-206ENST00000535565 AK7Q96M32 723 aa28.67■■■□□ 2.18
RBFOX1-206ENST00000535565 RTCBQ9Y3I0 505 aaKnown RBP28.67■■■□□ 2.18
RBFOX1-206ENST00000535565 PELP1Q8IZL8 1130 aaKnown RBP28.66■■■□□ 2.18
RBFOX1-206ENST00000535565 ISCA1Q9BUE6 129 aa28.66■■■□□ 2.18
RBFOX1-206ENST00000535565 TRIM28Q13263 835 aaKnown RBP28.65■■■□□ 2.18
RBFOX1-206ENST00000535565 HLFQ16534 295 aa28.65■■■□□ 2.18
RBFOX1-206ENST00000535565 TXNRD1Q16881 649 aa28.65■■■□□ 2.18
RBFOX1-206ENST00000535565 SIRT2Q8IXJ6 389 aa28.65■■■□□ 2.18
RBFOX1-206ENST00000535565 SCN7AQ01118 1682 aa28.65■■■□□ 2.18
RBFOX1-206ENST00000535565 ZNF652Q9Y2D9 606 aa28.63■■■□□ 2.17
RBFOX1-206ENST00000535565 CAMTA2O94983 1202 aa28.62■■■□□ 2.17
RBFOX1-206ENST00000535565 UBR3Q6ZT12 1888 aa28.62■■■□□ 2.17
RBFOX1-206ENST00000535565 C4AP0C0L4 1744 aa28.61■■■□□ 2.17
RBFOX1-206ENST00000535565 ATP8B2P98198 1209 aa28.61■■■□□ 2.17
RBFOX1-206ENST00000535565 UBE3BQ7Z3V4 1068 aa28.61■■■□□ 2.17
RBFOX1-206ENST00000535565 GCC1Q96CN9 775 aa28.61■■■□□ 2.17
RBFOX1-206ENST00000535565 RGL2O15211 777 aa28.6■■■□□ 2.17
RBFOX1-206ENST00000535565 SMC5Q8IY18 1101 aa28.59■■■□□ 2.17
RBFOX1-206ENST00000535565 CLEC4GQ6UXB4 293 aa28.58■■■□□ 2.17
RBFOX1-206ENST00000535565 PROM2Q8N271 834 aa28.58■■■□□ 2.17
RBFOX1-206ENST00000535565 SUCLG2Q96I99 432 aa28.58■■■□□ 2.17
RBFOX1-206ENST00000535565 H7C1W4 665 aa28.58■■■□□ 2.17
RBFOX1-206ENST00000535565 ADRA2BP18089 450 aa28.58■■■□□ 2.17
RBFOX1-206ENST00000535565 GPTP24298 496 aa28.58■■■□□ 2.17
RBFOX1-206ENST00000535565 NLRP10Q86W26 655 aa28.57■■■□□ 2.16
RBFOX1-206ENST00000535565 ZNF34Q8IZ26 560 aa28.57■■■□□ 2.16
RBFOX1-206ENST00000535565 NARFQ9UHQ1 456 aa28.57■■■□□ 2.16
RBFOX1-206ENST00000535565 ZPR1O75312 459 aa28.56■■■□□ 2.16
RBFOX1-206ENST00000535565 TRAPPC3LQ5T215 181 aa28.56■■■□□ 2.16
RBFOX1-206ENST00000535565 PNMA6EA0A0J9YXQ4 647 aa28.55■■■□□ 2.16
RBFOX1-206ENST00000535565 MTX1Q13505 466 aa28.55■■■□□ 2.16
RBFOX1-206ENST00000535565 PPP1R42Q7Z4L9 355 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms