RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 CAMTA2O94983 1202 aa11.16□□□□□ -0.62
RPUSD4-209ENST00000534393 RASSF7Q02833 373 aa11.16□□□□□ -0.62
RPUSD4-209ENST00000534393 STYK1Q6J9G0 422 aa11.16□□□□□ -0.62
RPUSD4-209ENST00000534393 DNAJC5GQ8N7S2 189 aa11.16□□□□□ -0.62
RPUSD4-209ENST00000534393 USP16Q9Y5T5 823 aa11.16□□□□□ -0.62
RPUSD4-209ENST00000534393 SLX4Q8IY92 1834 aa11.16□□□□□ -0.62
RPUSD4-209ENST00000534393 NFKBIEO00221 500 aa11.15□□□□□ -0.62
RPUSD4-209ENST00000534393 KCNQ3O43525 872 aa11.15□□□□□ -0.62
RPUSD4-209ENST00000534393 TAF7Q15545 349 aaPredicted RBP11.15□□□□□ -0.62
RPUSD4-209ENST00000534393 MASTLQ96GX5 879 aa11.15□□□□□ -0.62
RPUSD4-209ENST00000534393 PNNQ9H307 717 aaKnown RBP11.15□□□□□ -0.62
RPUSD4-209ENST00000534393 LTBP3Q9NS15 1303 aa11.14□□□□□ -0.63
RPUSD4-209ENST00000534393 LAMB4A4D0S4 1761 aa11.14□□□□□ -0.63
RPUSD4-209ENST00000534393 C21orf2O43822 256 aa11.14□□□□□ -0.63
RPUSD4-209ENST00000534393 SRGNP10124 158 aa11.14□□□□□ -0.63
RPUSD4-209ENST00000534393 TPTE2Q6XPS3 522 aa11.14□□□□□ -0.63
RPUSD4-209ENST00000534393 MCM10Q7L590 875 aa11.14□□□□□ -0.63
RPUSD4-209ENST00000534393 PNISRQ8TF01 805 aaKnown RBP11.14□□□□□ -0.63
RPUSD4-209ENST00000534393 NUP98P52948 1817 aa11.14□□□□□ -0.63
RPUSD4-209ENST00000534393 ERFEQ4G0M1 354 aa11.13□□□□□ -0.63
RPUSD4-209ENST00000534393 NBPF5PQ86XG9 351 aaPredicted RBP11.13□□□□□ -0.63
RPUSD4-209ENST00000534393 KLRG1Q96E93 195 aa11.13□□□□□ -0.63
RPUSD4-209ENST00000534393 TAOK3Q9H2K8 898 aa11.13□□□□□ -0.63
RPUSD4-209ENST00000534393 PRELPP51888 382 aa11.12□□□□□ -0.63
RPUSD4-209ENST00000534393 NIP7Q9Y221 180 aaKnown RBP eCLIP11.12□□□□□ -0.63
RPUSD4-209ENST00000534393 KDM3BQ7LBC6 1761 aa11.12□□□□□ -0.63
RPUSD4-209ENST00000534393 SCN4AP35499 1836 aa11.12□□□□□ -0.63
RPUSD4-209ENST00000534393 ZNF316A6NFI3 1004 aaPredicted RBP11.11□□□□□ -0.63
RPUSD4-209ENST00000534393 NPR1P16066 1061 aa11.11□□□□□ -0.63
RPUSD4-209ENST00000534393 DCTN1Q14203 1278 aa11.11□□□□□ -0.63
RPUSD4-209ENST00000534393 PRPF40BQ6NWY9 871 aaKnown RBP11.11□□□□□ -0.63
RPUSD4-209ENST00000534393 CCDC24Q8N4L8 307 aa11.11□□□□□ -0.63
RPUSD4-209ENST00000534393 JMYQ8N9B5 988 aa11.11□□□□□ -0.63
RPUSD4-209ENST00000534393 ZNF219Q9P2Y4 722 aaPredicted RBP11.11□□□□□ -0.63
RPUSD4-209ENST00000534393 PRAMEF22A3QJZ6 481 aa11.1□□□□□ -0.63
RPUSD4-209ENST00000534393 KLRG2A4D1S0 409 aaPredicted RBP11.1□□□□□ -0.63
RPUSD4-209ENST00000534393 GTF2E1P29083 439 aaPredicted RBP11.1□□□□□ -0.63
RPUSD4-209ENST00000534393 PIP4K2AP48426 406 aaPredicted RBP11.1□□□□□ -0.63
RPUSD4-209ENST00000534393 CCDC93Q567U6 631 aa11.1□□□□□ -0.63
RPUSD4-209ENST00000534393 NYXQ9GZU5 481 aa11.1□□□□□ -0.63
RPUSD4-209ENST00000534393 PCNTO95613 3336 aa11.1□□□□□ -0.63
RPUSD4-209ENST00000534393 NBPF26B4DH59 902 aa11.09□□□□□ -0.63
RPUSD4-209ENST00000534393 ERVV-1B6SEH8 477 aa11.09□□□□□ -0.63
RPUSD4-209ENST00000534393 ALDH1B1P30837 517 aa11.09□□□□□ -0.63
RPUSD4-209ENST00000534393 NBPF10Q6P3W6 841 aaKnown RBP11.09□□□□□ -0.63
RPUSD4-209ENST00000534393 RTKN2Q8IZC4 609 aa11.09□□□□□ -0.63
RPUSD4-209ENST00000534393 NBPF15Q8N660 670 aa11.09□□□□□ -0.63
RPUSD4-209ENST00000534393 MAPK8IP3Q9UPT6 1336 aa11.09□□□□□ -0.63
RPUSD4-209ENST00000534393 IQCA1LA6NCM1 817 aa11.08□□□□□ -0.64
RPUSD4-209ENST00000534393 POTECB2RU33 542 aa11.08□□□□□ -0.64
RPUSD4-209ENST00000534393 NFE2L2Q16236 605 aa11.08□□□□□ -0.64
RPUSD4-209ENST00000534393 C7orf43Q8WVR3 580 aa11.08□□□□□ -0.64
RPUSD4-209ENST00000534393 HTRA3P83110 453 aa11.07□□□□□ -0.64
RPUSD4-209ENST00000534393 FKBP4Q02790 459 aaKnown RBP eCLIP11.07□□□□□ -0.64
RPUSD4-209ENST00000534393 GRIPAP1Q4V328 841 aa11.07□□□□□ -0.64
RPUSD4-209ENST00000534393 KIF6Q6ZMV9 814 aa11.07□□□□□ -0.64
RPUSD4-209ENST00000534393 PLEKHF1Q96S99 279 aa11.07□□□□□ -0.64
RPUSD4-209ENST00000534393 MIS18AQ9NYP9 233 aa11.07□□□□□ -0.64
RPUSD4-209ENST00000534393 ERBB4Q15303 1308 aa11.07□□□□□ -0.64
RPUSD4-209ENST00000534393 EIF4A1P60842 406 aaKnown RBP11.06□□□□□ -0.64
RPUSD4-209ENST00000534393 HLFQ16534 295 aa11.06□□□□□ -0.64
RPUSD4-209ENST00000534393 CC2D2BQ6DHV5 1058 aa11.06□□□□□ -0.64
RPUSD4-209ENST00000534393 CHADLQ6NUI6 762 aa11.06□□□□□ -0.64
RPUSD4-209ENST00000534393 MAP3K15Q6ZN16 1313 aa11.06□□□□□ -0.64
RPUSD4-209ENST00000534393 IBTKQ9P2D0 1353 aaPredicted RBP11.05□□□□□ -0.64
RPUSD4-209ENST00000534393 FAM177BA6PVY3 158 aa11.05□□□□□ -0.64
RPUSD4-209ENST00000534393 DDNO94850 711 aaPredicted RBP11.05□□□□□ -0.64
RPUSD4-209ENST00000534393 L3MBTL3Q96JM7 780 aaPredicted RBP11.05□□□□□ -0.64
RPUSD4-209ENST00000534393 BABAM1Q9NWV8 329 aa11.05□□□□□ -0.64
RPUSD4-209ENST00000534393 RRP7AQ9Y3A4 280 aaKnown RBP11.05□□□□□ -0.64
RPUSD4-209ENST00000534393 RIC1Q4ADV7 1423 aa11.04□□□□□ -0.64
RPUSD4-209ENST00000534393 LMOD3Q0VAK6 560 aa11.04□□□□□ -0.64
RPUSD4-209ENST00000534393 RALBP1Q15311 655 aa11.04□□□□□ -0.64
RPUSD4-209ENST00000534393 CRY2Q49AN0 593 aa11.04□□□□□ -0.64
RPUSD4-209ENST00000534393 LDHDQ86WU2 507 aa11.04□□□□□ -0.64
RPUSD4-209ENST00000534393 NGEFQ8N5V2 710 aa11.04□□□□□ -0.64
RPUSD4-209ENST00000534393 MYL6BP14649 208 aa11.03□□□□□ -0.64
RPUSD4-209ENST00000534393 HOXA10P31260 410 aaPredicted RBP11.03□□□□□ -0.64
RPUSD4-209ENST00000534393 IARSP41252 1262 aaKnown RBP11.03□□□□□ -0.64
RPUSD4-209ENST00000534393 PPP1R42Q7Z4L9 355 aa11.03□□□□□ -0.64
RPUSD4-209ENST00000534393 JDP2Q8WYK2 163 aa11.03□□□□□ -0.64
RPUSD4-209ENST00000534393 RPGRQ92834 1020 aaKnown RBP11.03□□□□□ -0.64
RPUSD4-209ENST00000534393 PSMD1Q99460 953 aa11.03□□□□□ -0.64
RPUSD4-209ENST00000534393 TMX4Q9H1E5 349 aaPredicted RBP11.03□□□□□ -0.64
RPUSD4-209ENST00000534393 CREBZFQ9NS37 354 aa11.03□□□□□ -0.64
RPUSD4-209ENST00000534393 TSPYL4Q9UJ04 414 aa11.03□□□□□ -0.64
RPUSD4-209ENST00000534393 ANKRD36CQ5JPF3 1778 aa11.03□□□□□ -0.64
RPUSD4-209ENST00000534393 RIPK4P57078 832 aa11.02□□□□□ -0.65
RPUSD4-209ENST00000534393 PARP10Q53GL7 1025 aa11.02□□□□□ -0.65
RPUSD4-209ENST00000534393 GIGYF2Q6Y7W6 1299 aaKnown RBP11.02□□□□□ -0.65
RPUSD4-209ENST00000534393 PNMA8AQ86V59 439 aaPredicted RBP11.02□□□□□ -0.65
RPUSD4-209ENST00000534393 SYNE4Q8N205 404 aa11.02□□□□□ -0.65
RPUSD4-209ENST00000534393 RBM17Q96I25 401 aaKnown RBP11.02□□□□□ -0.65
RPUSD4-209ENST00000534393 CRAMP1Q96RY5 1269 aa11.02□□□□□ -0.65
RPUSD4-209ENST00000534393 TAF1DQ9H5J8 278 aaPredicted RBP11.02□□□□□ -0.65
RPUSD4-209ENST00000534393 ZNF277Q9NRM2 450 aaPredicted RBP11.02□□□□□ -0.65
RPUSD4-209ENST00000534393 HACL1Q9UJ83 578 aa11.02□□□□□ -0.65
RPUSD4-209ENST00000534393 FZD9O00144 591 aa11.01□□□□□ -0.65
RPUSD4-209ENST00000534393 GPTP24298 496 aa11.01□□□□□ -0.65
RPUSD4-209ENST00000534393 TTLL7Q6ZT98 887 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms