RNA–Protein interactions for RNA: ENST00000533411.5

SOX6-215, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-215ENST00000533411 MBIPQ9NS73 344 aa8.95□□□□□ -0.98
SOX6-215ENST00000533411 N4BP2Q86UW6 1770 aaPredicted RBP8.94□□□□□ -0.98
SOX6-215ENST00000533411 CHD4Q14839 1912 aa8.94□□□□□ -0.98
SOX6-215ENST00000533411 IPO8O15397 1037 aaKnown RBP8.94□□□□□ -0.98
SOX6-215ENST00000533411 HTATSF1O43719 755 aaKnown RBP8.94□□□□□ -0.98
SOX6-215ENST00000533411 GPR162Q16538 588 aa8.94□□□□□ -0.98
SOX6-215ENST00000533411 TRAPPC3LQ5T215 181 aa8.94□□□□□ -0.98
SOX6-215ENST00000533411 CHADLQ6NUI6 762 aa8.94□□□□□ -0.98
SOX6-215ENST00000533411 SRP68Q9UHB9 627 aaKnown RBP8.94□□□□□ -0.98
SOX6-215ENST00000533411 MMP10P09238 476 aa8.93□□□□□ -0.98
SOX6-215ENST00000533411 TEFQ10587 303 aa8.93□□□□□ -0.98
SOX6-215ENST00000533411 INTS5Q6P9B9 1019 aaKnown RBP8.93□□□□□ -0.98
SOX6-215ENST00000533411 CENPQQ7L2Z9 268 aaPredicted RBP8.93□□□□□ -0.98
SOX6-215ENST00000533411 MCM10Q7L590 875 aa8.93□□□□□ -0.98
SOX6-215ENST00000533411 SSH1Q8WYL5 1049 aa8.93□□□□□ -0.98
SOX6-215ENST00000533411 TSHZ2Q9NRE2 1034 aa8.93□□□□□ -0.98
SOX6-215ENST00000533411 CCDC87Q9NVE4 849 aa8.93□□□□□ -0.98
SOX6-215ENST00000533411 WWC3Q9ULE0 1092 aa8.93□□□□□ -0.98
SOX6-215ENST00000533411 CEMIPQ8WUJ3 1361 aa8.93□□□□□ -0.98
SOX6-215ENST00000533411 KIAA1551Q9HCM1 1747 aa8.93□□□□□ -0.98
SOX6-215ENST00000533411 KIF13BQ9NQT8 1826 aa8.92□□□□□ -0.98
SOX6-215ENST00000533411 KCNQ3O43525 872 aa8.92□□□□□ -0.98
SOX6-215ENST00000533411 CYP19A1P11511 503 aaPredicted RBP8.92□□□□□ -0.98
SOX6-215ENST00000533411 GYS1P13807 737 aa8.92□□□□□ -0.98
SOX6-215ENST00000533411 YBX3P16989 372 aaKnown RBP eCLIP8.92□□□□□ -0.98
SOX6-215ENST00000533411 RFC4P35249 363 aa8.92□□□□□ -0.98
SOX6-215ENST00000533411 DCTN1Q14203 1278 aa8.92□□□□□ -0.98
SOX6-215ENST00000533411 TWISTNBQ3B726 338 aaPredicted RBP8.92□□□□□ -0.98
SOX6-215ENST00000533411 DZIP1LQ8IYY4 767 aaKnown RBP8.92□□□□□ -0.98
SOX6-215ENST00000533411 TTC5Q8N0Z6 440 aa8.92□□□□□ -0.98
SOX6-215ENST00000533411 PANK1Q8TE04 598 aa8.92□□□□□ -0.98
SOX6-215ENST00000533411 CLUAP1Q96AJ1 413 aa8.92□□□□□ -0.98
SOX6-215ENST00000533411 ZNF496Q96IT1 587 aaPredicted RBP8.92□□□□□ -0.98
SOX6-215ENST00000533411 ZBTB1Q9Y2K1 713 aa8.92□□□□□ -0.98
SOX6-215ENST00000533411 COG6Q9Y2V7 657 aa8.92□□□□□ -0.98
SOX6-215ENST00000533411 SOS1Q07889 1333 aaPredicted RBP8.91□□□□□ -0.98
SOX6-215ENST00000533411 KDM2BQ8NHM5 1336 aa8.91□□□□□ -0.98
SOX6-215ENST00000533411 BRPF1P55201 1214 aaPredicted RBP8.91□□□□□ -0.98
SOX6-215ENST00000533411 MKRN4PQ13434 485 aaPredicted RBP8.91□□□□□ -0.98
SOX6-215ENST00000533411 MVPQ14764 893 aaKnown RBP8.91□□□□□ -0.98
SOX6-215ENST00000533411 ZNF790Q6PG37 636 aa8.91□□□□□ -0.98
SOX6-215ENST00000533411 ATF7IPQ6VMQ6 1270 aa8.91□□□□□ -0.98
SOX6-215ENST00000533411 TSPYL4Q9UJ04 414 aa8.91□□□□□ -0.98
SOX6-215ENST00000533411 CD2APQ9Y5K6 639 aa8.91□□□□□ -0.98
SOX6-215ENST00000533411 COL15A1P39059 1388 aa8.9□□□□□ -0.98
SOX6-215ENST00000533411 HEG1Q9ULI3 1381 aa8.9□□□□□ -0.98
SOX6-215ENST00000533411 USP42Q9H9J4 1324 aaKnown RBP8.9□□□□□ -0.98
SOX6-215ENST00000533411 CHL1O00533 1208 aa8.9□□□□□ -0.98
SOX6-215ENST00000533411 RLBP1P12271 317 aa8.9□□□□□ -0.98
SOX6-215ENST00000533411 TRIM27P14373 513 aa8.9□□□□□ -0.98
SOX6-215ENST00000533411 VSIG10Q8N0Z9 540 aa8.9□□□□□ -0.98
SOX6-215ENST00000533411 C10orf71Q711Q0 1435 aa8.89□□□□□ -0.99
SOX6-215ENST00000533411 AFDNP55196 1824 aaKnown RBP8.89□□□□□ -0.99
SOX6-215ENST00000533411 PRAMEF22A3QJZ6 481 aa8.89□□□□□ -0.99
SOX6-215ENST00000533411 BTBD11A6QL63 1104 aa8.89□□□□□ -0.99
SOX6-215ENST00000533411 VAMP4O75379 141 aa8.89□□□□□ -0.99
SOX6-215ENST00000533411 DDR1Q08345 913 aa8.89□□□□□ -0.99
SOX6-215ENST00000533411 USPL1Q5W0Q7 1092 aa8.89□□□□□ -0.99
SOX6-215ENST00000533411 ITPRIPQ8IWB1 547 aa8.89□□□□□ -0.99
SOX6-215ENST00000533411 NLGN1Q8N2Q7 840 aa8.89□□□□□ -0.99
SOX6-215ENST00000533411 API5Q9BZZ5 524 aaKnown RBP8.89□□□□□ -0.99
SOX6-215ENST00000533411 CHMP4BQ9H444 224 aaKnown RBP8.89□□□□□ -0.99
SOX6-215ENST00000533411 BABAM1Q9NWV8 329 aa8.89□□□□□ -0.99
SOX6-215ENST00000533411 NOB1Q9ULX3 412 aaKnown RBP8.89□□□□□ -0.99
SOX6-215ENST00000533411 DDX19BQ9UMR2 479 aa8.89□□□□□ -0.99
SOX6-215ENST00000533411 PXDNLA1KZ92 1463 aa8.89□□□□□ -0.99
SOX6-215ENST00000533411 SCN7AQ01118 1682 aa8.88□□□□□ -0.99
SOX6-215ENST00000533411 TCERG1O14776 1098 aaKnown RBP8.88□□□□□ -0.99
SOX6-215ENST00000533411 PRR29P0C7W0 189 aa8.88□□□□□ -0.99
SOX6-215ENST00000533411 PIP4K2AP48426 406 aaPredicted RBP8.88□□□□□ -0.99
SOX6-215ENST00000533411 MRPL50Q8N5N7 158 aaKnown RBP8.88□□□□□ -0.99
SOX6-215ENST00000533411 TSPYL6Q8N831 410 aa8.88□□□□□ -0.99
SOX6-215ENST00000533411 C8orf58Q8NAV2 365 aa8.88□□□□□ -0.99
SOX6-215ENST00000533411 ARHGAP45Q92619 1136 aa8.88□□□□□ -0.99
SOX6-215ENST00000533411 FMNL2Q96PY5 1086 aa8.88□□□□□ -0.99
SOX6-215ENST00000533411 MIS18AQ9NYP9 233 aa8.88□□□□□ -0.99
SOX6-215ENST00000533411 ZNF330Q9Y3S2 320 aaPredicted RBP8.88□□□□□ -0.99
SOX6-215ENST00000533411 PARP3Q9Y6F1 533 aa8.88□□□□□ -0.99
SOX6-215ENST00000533411 BRCA1P38398 1863 aaKnown RBP8.87□□□□□ -0.99
SOX6-215ENST00000533411 ABCC4O15439 1325 aa8.87□□□□□ -0.99
SOX6-215ENST00000533411 LAMB4A4D0S4 1761 aa8.87□□□□□ -0.99
SOX6-215ENST00000533411 A0A0G2JLW4 131 aa8.87□□□□□ -0.99
SOX6-215ENST00000533411 C19orf67A6NJJ6 358 aa8.87□□□□□ -0.99
SOX6-215ENST00000533411 ZPR1O75312 459 aa8.87□□□□□ -0.99
SOX6-215ENST00000533411 GABBR2O75899 941 aa8.87□□□□□ -0.99
SOX6-215ENST00000533411 A1BGP04217 495 aa8.87□□□□□ -0.99
SOX6-215ENST00000533411 BCL2L12Q9HB09 334 aa8.87□□□□□ -0.99
SOX6-215ENST00000533411 TNNQ9UQP3 1299 aa8.87□□□□□ -0.99
SOX6-215ENST00000533411 USP16Q9Y5T5 823 aa8.87□□□□□ -0.99
SOX6-215ENST00000533411 BCORQ6W2J9 1755 aa8.86□□□□□ -0.99
SOX6-215ENST00000533411 PTPRCP08575 1304 aa8.86□□□□□ -0.99
SOX6-215ENST00000533411 NRXN2Q9P2S2 1712 aa8.86□□□□□ -0.99
SOX6-215ENST00000533411 POLRMTO00411 1230 aaKnown RBP8.86□□□□□ -0.99
SOX6-215ENST00000533411 ELL2O00472 640 aaPredicted RBP8.86□□□□□ -0.99
SOX6-215ENST00000533411 STARD3NLO95772 234 aa8.86□□□□□ -0.99
SOX6-215ENST00000533411 TM4SF1P30408 202 aa8.86□□□□□ -0.99
SOX6-215ENST00000533411 EIF5P55010 431 aaKnown RBP8.86□□□□□ -0.99
SOX6-215ENST00000533411 TMEM57Q8N5G2 664 aa8.86□□□□□ -0.99
SOX6-215ENST00000533411 ZNF784Q8NCA9 323 aaPredicted RBP8.86□□□□□ -0.99
SOX6-215ENST00000533411 NARFQ9UHQ1 456 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms