RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 HTRA3P83110 453 aa22.74■■□□□ 1.23
RPUSD4-207ENST00000532800 NBPF10Q6P3W6 841 aaKnown RBP22.74■■□□□ 1.23
RPUSD4-207ENST00000532800 NBPF15Q8N660 670 aa22.74■■□□□ 1.23
RPUSD4-207ENST00000532800 DNAJC5GQ8N7S2 189 aa22.74■■□□□ 1.23
RPUSD4-207ENST00000532800 PDZRN3Q9UPQ7 1066 aa22.74■■□□□ 1.23
RPUSD4-207ENST00000532800 FSTL1Q12841 308 aa22.73■■□□□ 1.23
RPUSD4-207ENST00000532800 MIS18AQ9NYP9 233 aa22.73■■□□□ 1.23
RPUSD4-207ENST00000532800 KDM3BQ7LBC6 1761 aa22.73■■□□□ 1.23
RPUSD4-207ENST00000532800 DICER1Q9UPY3 1922 aaKnown RBP22.72■■□□□ 1.23
RPUSD4-207ENST00000532800 GLTPD2A6NH11 291 aa22.72■■□□□ 1.23
RPUSD4-207ENST00000532800 ST5P78524 1137 aa22.72■■□□□ 1.23
RPUSD4-207ENST00000532800 TAF7Q15545 349 aaPredicted RBP22.71■■□□□ 1.23
RPUSD4-207ENST00000532800 SRGNP10124 158 aa22.7■■□□□ 1.22
RPUSD4-207ENST00000532800 IFFO2Q5TF58 517 aa22.69■■□□□ 1.22
RPUSD4-207ENST00000532800 STYK1Q6J9G0 422 aa22.69■■□□□ 1.22
RPUSD4-207ENST00000532800 PRPF40BQ6NWY9 871 aaKnown RBP22.69■■□□□ 1.22
RPUSD4-207ENST00000532800 CLEC4GQ6UXB4 293 aa22.69■■□□□ 1.22
RPUSD4-207ENST00000532800 NBPF5PQ86XG9 351 aaPredicted RBP22.69■■□□□ 1.22
RPUSD4-207ENST00000532800 ZNF652Q9Y2D9 606 aa22.69■■□□□ 1.22
RPUSD4-207ENST00000532800 CNKSR1Q969H4 720 aa22.68■■□□□ 1.22
RPUSD4-207ENST00000532800 PLEKHF1Q96S99 279 aa22.68■■□□□ 1.22
RPUSD4-207ENST00000532800 VEGFAP15692 232 aaPredicted RBP22.67■■□□□ 1.22
RPUSD4-207ENST00000532800 SMC1BQ8NDV3 1235 aa22.67■■□□□ 1.22
RPUSD4-207ENST00000532800 MASTLQ96GX5 879 aa22.67■■□□□ 1.22
RPUSD4-207ENST00000532800 THUMPD2Q9BTF0 503 aaKnown RBP22.67■■□□□ 1.22
RPUSD4-207ENST00000532800 NIP7Q9Y221 180 aaKnown RBP eCLIP22.67■■□□□ 1.22
RPUSD4-207ENST00000532800 HLFQ16534 295 aa22.66■■□□□ 1.22
RPUSD4-207ENST00000532800 TAOK3Q9H2K8 898 aa22.66■■□□□ 1.22
RPUSD4-207ENST00000532800 LTBP3Q9NS15 1303 aa22.65■■□□□ 1.22
RPUSD4-207ENST00000532800 FAM177BA6PVY3 158 aa22.65■■□□□ 1.22
RPUSD4-207ENST00000532800 POTECB2RU33 542 aa22.65■■□□□ 1.22
RPUSD4-207ENST00000532800 NEFMP07197 916 aa22.65■■□□□ 1.22
RPUSD4-207ENST00000532800 ERFEQ4G0M1 354 aa22.65■■□□□ 1.22
RPUSD4-207ENST00000532800 NFE2L2Q16236 605 aa22.64■■□□□ 1.21
RPUSD4-207ENST00000532800 NGEFQ8N5V2 710 aa22.63■■□□□ 1.21
RPUSD4-207ENST00000532800 KLRG1Q96E93 195 aa22.63■■□□□ 1.21
RPUSD4-207ENST00000532800 NUP98P52948 1817 aa22.62■■□□□ 1.21
RPUSD4-207ENST00000532800 RGL2O15211 777 aa22.62■■□□□ 1.21
RPUSD4-207ENST00000532800 EIF4A1P60842 406 aaKnown RBP22.62■■□□□ 1.21
RPUSD4-207ENST00000532800 PNISRQ8TF01 805 aaKnown RBP22.62■■□□□ 1.21
RPUSD4-207ENST00000532800 NPR1P16066 1061 aa22.61■■□□□ 1.21
RPUSD4-207ENST00000532800 DPY19L2Q6NUT2 758 aa22.61■■□□□ 1.21
RPUSD4-207ENST00000532800 TPTE2Q6XPS3 522 aa22.61■■□□□ 1.21
RPUSD4-207ENST00000532800 C7orf43Q8WVR3 580 aa22.61■■□□□ 1.21
RPUSD4-207ENST00000532800 KLRG2A4D1S0 409 aaPredicted RBP22.6■■□□□ 1.21
RPUSD4-207ENST00000532800 SOGA3Q5TF21 947 aa22.6■■□□□ 1.21
RPUSD4-207ENST00000532800 MAPK8IP3Q9UPT6 1336 aa22.59■■□□□ 1.21
RPUSD4-207ENST00000532800 CCDC93Q567U6 631 aa22.59■■□□□ 1.21
RPUSD4-207ENST00000532800 OLFM4Q6UX06 510 aa22.59■■□□□ 1.21
RPUSD4-207ENST00000532800 TTLL7Q6ZT98 887 aa22.59■■□□□ 1.21
RPUSD4-207ENST00000532800 RRP7AQ9Y3A4 280 aaKnown RBP22.59■■□□□ 1.21
RPUSD4-207ENST00000532800 ABCC12Q96J65 1359 aa22.59■■□□□ 1.21
RPUSD4-207ENST00000532800 DDNO94850 711 aaPredicted RBP22.58■■□□□ 1.21
RPUSD4-207ENST00000532800 MAP3K15Q6ZN16 1313 aa22.57■■□□□ 1.2
RPUSD4-207ENST00000532800 MYL6BP14649 208 aa22.57■■□□□ 1.2
RPUSD4-207ENST00000532800 PCNTO95613 3336 aa22.56■■□□□ 1.2
RPUSD4-207ENST00000532800 NUTM1Q86Y26 1132 aa22.56■■□□□ 1.2
RPUSD4-207ENST00000532800 JMYQ8N9B5 988 aa22.56■■□□□ 1.2
RPUSD4-207ENST00000532800 ERVV-1B6SEH8 477 aa22.55■■□□□ 1.2
RPUSD4-207ENST00000532800 GTF2E1P29083 439 aaPredicted RBP22.55■■□□□ 1.2
RPUSD4-207ENST00000532800 PNNQ9H307 717 aaKnown RBP22.55■■□□□ 1.2
RPUSD4-207ENST00000532800 ZBTB3Q9H5J0 574 aa22.55■■□□□ 1.2
RPUSD4-207ENST00000532800 UBN2Q6ZU65 1347 aa22.55■■□□□ 1.2
RPUSD4-207ENST00000532800 POTEIP0CG38 1075 aa22.54■■□□□ 1.2
RPUSD4-207ENST00000532800 POTEJP0CG39 1038 aa22.54■■□□□ 1.2
RPUSD4-207ENST00000532800 FKBP4Q02790 459 aaKnown RBP eCLIP22.54■■□□□ 1.2
RPUSD4-207ENST00000532800 KIF6Q6ZMV9 814 aa22.54■■□□□ 1.2
RPUSD4-207ENST00000532800 ZNF277Q9NRM2 450 aaPredicted RBP22.54■■□□□ 1.2
RPUSD4-207ENST00000532800 GPTP24298 496 aa22.53■■□□□ 1.2
RPUSD4-207ENST00000532800 TSPYL4Q9UJ04 414 aa22.53■■□□□ 1.2
RPUSD4-207ENST00000532800 NYXQ9GZU5 481 aa22.52■■□□□ 1.2
RPUSD4-207ENST00000532800 ZNF541Q9H0D2 1346 aa22.52■■□□□ 1.2
RPUSD4-207ENST00000532800 SNED1Q8TER0 1413 aa22.51■■□□□ 1.19
RPUSD4-207ENST00000532800 RIPK4P57078 832 aa22.51■■□□□ 1.19
RPUSD4-207ENST00000532800 CRY2Q49AN0 593 aa22.51■■□□□ 1.19
RPUSD4-207ENST00000532800 ALDH1B1P30837 517 aa22.5■■□□□ 1.19
RPUSD4-207ENST00000532800 RALBP1Q15311 655 aa22.5■■□□□ 1.19
RPUSD4-207ENST00000532800 SUSD4Q5VX71 490 aa22.5■■□□□ 1.19
RPUSD4-207ENST00000532800 SCN4AP35499 1836 aa22.5■■□□□ 1.19
RPUSD4-207ENST00000532800 IBTKQ9P2D0 1353 aaPredicted RBP22.5■■□□□ 1.19
RPUSD4-207ENST00000532800 CHADLQ6NUI6 762 aa22.49■■□□□ 1.19
RPUSD4-207ENST00000532800 LRP10Q7Z4F1 713 aa22.49■■□□□ 1.19
RPUSD4-207ENST00000532800 RTKN2Q8IZC4 609 aa22.49■■□□□ 1.19
RPUSD4-207ENST00000532800 ERBB4Q15303 1308 aa22.49■■□□□ 1.19
RPUSD4-207ENST00000532800 RIC1Q4ADV7 1423 aa22.48■■□□□ 1.19
RPUSD4-207ENST00000532800 TMPOP42166 694 aaKnown RBP22.48■■□□□ 1.19
RPUSD4-207ENST00000532800 SLC51AQ86UW1 340 aa22.48■■□□□ 1.19
RPUSD4-207ENST00000532800 ZNF34Q8IZ26 560 aa22.48■■□□□ 1.19
RPUSD4-207ENST00000532800 L3MBTL3Q96JM7 780 aaPredicted RBP22.48■■□□□ 1.19
RPUSD4-207ENST00000532800 NTSR2O95665 410 aa22.47■■□□□ 1.19
RPUSD4-207ENST00000532800 ANXA1P04083 346 aa22.47■■□□□ 1.19
RPUSD4-207ENST00000532800 EIF2S2P20042 333 aaKnown RBP22.47■■□□□ 1.19
RPUSD4-207ENST00000532800 PDIA6Q15084 440 aa22.47■■□□□ 1.19
RPUSD4-207ENST00000532800 PROSER3Q2NL68 480 aa22.47■■□□□ 1.19
RPUSD4-207ENST00000532800 GIGYF2Q6Y7W6 1299 aaKnown RBP22.47■■□□□ 1.19
RPUSD4-207ENST00000532800 SYNE4Q8N205 404 aa22.47■■□□□ 1.19
RPUSD4-207ENST00000532800 COL4A5P29400 1685 aa22.46■■□□□ 1.19
RPUSD4-207ENST00000532800 IQCA1LA6NCM1 817 aa22.46■■□□□ 1.19
RPUSD4-207ENST00000532800 IARSP41252 1262 aaKnown RBP22.46■■□□□ 1.19
RPUSD4-207ENST00000532800 DDX10Q13206 875 aaKnown RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms