RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 MEIS3Q99687 375 aa27.72■■■□□ 2.03
PACSIN3-209ENST00000532457 RREB1Q92766 1687 aa27.72■■■□□ 2.03
PACSIN3-209ENST00000532457 ITPK1Q13572 414 aa27.71■■■□□ 2.03
PACSIN3-209ENST00000532457 CICQ96RK0 1608 aaPredicted RBP27.71■■■□□ 2.03
PACSIN3-209ENST00000532457 TJP1Q07157 1748 aa27.69■■■□□ 2.02
PACSIN3-209ENST00000532457 TTLL7Q6ZT98 887 aa27.69■■■□□ 2.02
PACSIN3-209ENST00000532457 ANKRD13DQ6ZTN6 518 aa27.68■■■□□ 2.02
PACSIN3-209ENST00000532457 TAF1LQ8IZX4 1826 aa27.67■■■□□ 2.02
PACSIN3-209ENST00000532457 LINC00116Q8NCU8 138 aa27.67■■■□□ 2.02
PACSIN3-209ENST00000532457 PXDNLA1KZ92 1463 aa27.67■■■□□ 2.02
PACSIN3-209ENST00000532457 DDX58O95786 925 aaKnown RBP27.67■■■□□ 2.02
PACSIN3-209ENST00000532457 RIC3Q7Z5B4 369 aa27.67■■■□□ 2.02
PACSIN3-209ENST00000532457 SRCIN1Q9C0H9 1055 aa27.67■■■□□ 2.02
PACSIN3-209ENST00000532457 USP44Q9H0E7 712 aa27.67■■■□□ 2.02
PACSIN3-209ENST00000532457 RC3H1Q5TC82 1133 aaKnown RBP27.66■■■□□ 2.02
PACSIN3-209ENST00000532457 CHMP4BQ9H444 224 aaKnown RBP27.66■■■□□ 2.02
PACSIN3-209ENST00000532457 COL5A3P25940 1745 aaPredicted RBP27.65■■■□□ 2.02
PACSIN3-209ENST00000532457 NUP188Q5SRE5 1749 aa27.65■■■□□ 2.02
PACSIN3-209ENST00000532457 INTS5Q6P9B9 1019 aaKnown RBP27.64■■■□□ 2.02
PACSIN3-209ENST00000532457 SIRT2Q8IXJ6 389 aa27.64■■■□□ 2.02
PACSIN3-209ENST00000532457 ZBTB1Q9Y2K1 713 aa27.64■■■□□ 2.02
PACSIN3-209ENST00000532457 CNTNAP4Q9C0A0 1308 aa27.64■■■□□ 2.02
PACSIN3-209ENST00000532457 CRKLP46109 303 aaKnown RBP27.64■■■□□ 2.01
PACSIN3-209ENST00000532457 AK7Q96M32 723 aa27.64■■■□□ 2.01
PACSIN3-209ENST00000532457 ATP10DQ9P241 1426 aa27.64■■■□□ 2.01
PACSIN3-209ENST00000532457 C4BP0C0L5 1744 aa27.63■■■□□ 2.01
PACSIN3-209ENST00000532457 N4BP2Q86UW6 1770 aaPredicted RBP27.63■■■□□ 2.01
PACSIN3-209ENST00000532457 IGKV5-2P06315 115 aa27.63■■■□□ 2.01
PACSIN3-209ENST00000532457 CWF19L2Q2TBE0 894 aaKnown RBP27.63■■■□□ 2.01
PACSIN3-209ENST00000532457 CENPQQ7L2Z9 268 aaPredicted RBP27.63■■■□□ 2.01
PACSIN3-209ENST00000532457 PLBD2Q8NHP8 589 aa27.62■■■□□ 2.01
PACSIN3-209ENST00000532457 METTL22Q9BUU2 404 aaPredicted RBP27.62■■■□□ 2.01
PACSIN3-209ENST00000532457 STK32BQ9NY57 414 aa27.62■■■□□ 2.01
PACSIN3-209ENST00000532457 SKAP1Q86WV1 359 aa27.62■■■□□ 2.01
PACSIN3-209ENST00000532457 CCDC87Q9NVE4 849 aa27.62■■■□□ 2.01
PACSIN3-209ENST00000532457 HDAC1Q13547 482 aaPredicted RBP27.6■■■□□ 2.01
PACSIN3-209ENST00000532457 LINS1Q8NG48 757 aa27.6■■■□□ 2.01
PACSIN3-209ENST00000532457 AKT1S1Q96B36 256 aa27.6■■■□□ 2.01
PACSIN3-209ENST00000532457 RWDD1Q9H446 243 aaPredicted RBP27.6■■■□□ 2.01
PACSIN3-209ENST00000532457 ZNF330Q9Y3S2 320 aaPredicted RBP27.6■■■□□ 2.01
PACSIN3-209ENST00000532457 SLC15A2Q16348 729 aa27.6■■■□□ 2.01
PACSIN3-209ENST00000532457 MYD88Q99836 296 aa27.6■■■□□ 2.01
PACSIN3-209ENST00000532457 TFCP2L1Q9NZI6 479 aa27.6■■■□□ 2.01
PACSIN3-209ENST00000532457 NBPF7P0C2Y1 421 aaPredicted RBP27.59■■■□□ 2.01
PACSIN3-209ENST00000532457 ZBTB3Q9H5J0 574 aa27.59■■■□□ 2.01
PACSIN3-209ENST00000532457 GNPATO15228 680 aa27.58■■■□□ 2.01
PACSIN3-209ENST00000532457 ALDH1L1O75891 902 aa27.58■■■□□ 2.01
PACSIN3-209ENST00000532457 NPM2Q86SE8 214 aaKnown RBP27.58■■■□□ 2.01
PACSIN3-209ENST00000532457 RTCBQ9Y3I0 505 aaKnown RBP27.58■■■□□ 2.01
PACSIN3-209ENST00000532457 MYH14Q7Z406 1995 aaKnown RBP27.58■■■□□ 2.01
PACSIN3-209ENST00000532457 GNAI3P08754 354 aa27.57■■■□□ 2
PACSIN3-209ENST00000532457 ZNF827Q17R98 1081 aa27.57■■■□□ 2
PACSIN3-209ENST00000532457 ANO8Q9HCE9 1232 aaPredicted RBP27.57■■■□□ 2
PACSIN3-209ENST00000532457 NEURL1BA8MQ27 555 aa27.56■■■□□ 2
PACSIN3-209ENST00000532457 RPS6KA4O75676 772 aa27.56■■■□□ 2
PACSIN3-209ENST00000532457 CEP85Q6P2H3 762 aa27.56■■■□□ 2
PACSIN3-209ENST00000532457 ARFGEF2Q9Y6D5 1785 aa27.56■■■□□ 2
PACSIN3-209ENST00000532457 ATP5J2-PTCD1G3V325 749 aa27.55■■■□□ 2
PACSIN3-209ENST00000532457 GNAI2P04899 355 aa27.55■■■□□ 2
PACSIN3-209ENST00000532457 IL6STP40189 918 aaPredicted RBP27.55■■■□□ 2
PACSIN3-209ENST00000532457 EIF5P55010 431 aaKnown RBP27.55■■■□□ 2
PACSIN3-209ENST00000532457 FLAD1Q8NFF5 587 aa27.55■■■□□ 2
PACSIN3-209ENST00000532457 ANKRD44Q8N8A2 993 aa27.55■■■□□ 2
PACSIN3-209ENST00000532457 SSFA2P28290 1259 aa27.54■■■□□ 2
PACSIN3-209ENST00000532457 LRRFIP2Q9Y608 721 aaKnown RBP27.54■■■□□ 2
PACSIN3-209ENST00000532457 NEXNQ0ZGT2 675 aa27.53■■■□□ 2
PACSIN3-209ENST00000532457 UBTFL1P0CB47 393 aaPredicted RBP27.53■■■□□ 2
PACSIN3-209ENST00000532457 ADRA2BP18089 450 aa27.53■■■□□ 2
PACSIN3-209ENST00000532457 GCKRQ14397 625 aa27.53■■■□□ 2
PACSIN3-209ENST00000532457 ARXQ96QS3 562 aa27.53■■■□□ 2
PACSIN3-209ENST00000532457 HLFQ16534 295 aa27.52■■■□□ 2
PACSIN3-209ENST00000532457 TRAPPC3LQ5T215 181 aa27.51■■□□□ 1.99
PACSIN3-209ENST00000532457 RPAP2Q8IXW5 612 aaPredicted RBP27.51■■□□□ 1.99
PACSIN3-209ENST00000532457 TBC1D2BQ9UPU7 963 aa27.51■■□□□ 1.99
PACSIN3-209ENST00000532457 C9orf78Q9NZ63 289 aaPredicted RBP27.51■■□□□ 1.99
PACSIN3-209ENST00000532457 UTYO14607 1347 aa27.5■■□□□ 1.99
PACSIN3-209ENST00000532457 MAP3K15Q6ZN16 1313 aa27.5■■□□□ 1.99
PACSIN3-209ENST00000532457 UBR3Q6ZT12 1888 aa27.5■■□□□ 1.99
PACSIN3-209ENST00000532457 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.5■■□□□ 1.99
PACSIN3-209ENST00000532457 PHF14O94880 888 aa27.5■■□□□ 1.99
PACSIN3-209ENST00000532457 SMIM5Q71RC9 77 aa27.5■■□□□ 1.99
PACSIN3-209ENST00000532457 JARID2Q92833 1246 aaPredicted RBP27.5■■□□□ 1.99
PACSIN3-209ENST00000532457 A0A087WZG4 1122 aa27.49■■□□□ 1.99
PACSIN3-209ENST00000532457 GRM8O00222 908 aa27.49■■□□□ 1.99
PACSIN3-209ENST00000532457 SMC5Q8IY18 1101 aa27.49■■□□□ 1.99
PACSIN3-209ENST00000532457 KIF6Q6ZMV9 814 aa27.48■■□□□ 1.99
PACSIN3-209ENST00000532457 TCIRG1Q13488 830 aa27.48■■□□□ 1.99
PACSIN3-209ENST00000532457 DZIP3Q86Y13 1208 aaKnown RBP27.48■■□□□ 1.99
PACSIN3-209ENST00000532457 KAZALD1Q96I82 304 aa27.48■■□□□ 1.99
PACSIN3-209ENST00000532457 COL15A1P39059 1388 aa27.47■■□□□ 1.99
PACSIN3-209ENST00000532457 PNMA6EA0A0J9YXQ4 647 aa27.47■■□□□ 1.99
PACSIN3-209ENST00000532457 ATP8B2P98198 1209 aa27.47■■□□□ 1.99
PACSIN3-209ENST00000532457 R3HDM1Q15032 1099 aaKnown RBP27.47■■□□□ 1.99
PACSIN3-209ENST00000532457 ISCA1Q9BUE6 129 aa27.47■■□□□ 1.99
PACSIN3-209ENST00000532457 IBTKQ9P2D0 1353 aaPredicted RBP27.47■■□□□ 1.99
PACSIN3-209ENST00000532457 QSER1Q2KHR3 1735 aa27.47■■□□□ 1.99
PACSIN3-209ENST00000532457 RFC4P35249 363 aa27.46■■□□□ 1.99
PACSIN3-209ENST00000532457 GIGYF2Q6Y7W6 1299 aaKnown RBP27.46■■□□□ 1.99
PACSIN3-209ENST00000532457 ARHGEF1Q92888 912 aaKnown RBP27.46■■□□□ 1.99
PACSIN3-209ENST00000532457 PDZRN3Q9UPQ7 1066 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms