RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 FKBP8Q14318 412 aa28.59■■■□□ 2.17
LRRK1-208ENST00000532029 ZNF652Q9Y2D9 606 aa28.59■■■□□ 2.17
LRRK1-208ENST00000532029 SLC4A2P04920 1241 aa28.58■■■□□ 2.17
LRRK1-208ENST00000532029 CT47B1P0C2W7 299 aaPredicted RBP28.58■■■□□ 2.17
LRRK1-208ENST00000532029 BCL2L12Q9HB09 334 aa28.58■■■□□ 2.17
LRRK1-208ENST00000532029 MAP3K15Q6ZN16 1313 aa28.58■■■□□ 2.17
LRRK1-208ENST00000532029 ERVV-1B6SEH8 477 aa28.57■■■□□ 2.16
LRRK1-208ENST00000532029 ZNF428Q96B54 188 aa28.57■■■□□ 2.16
LRRK1-208ENST00000532029 ZBTB3Q9H5J0 574 aa28.57■■■□□ 2.16
LRRK1-208ENST00000532029 BCORQ6W2J9 1755 aa28.56■■■□□ 2.16
LRRK1-208ENST00000532029 PHAXQ9H814 394 aaKnown RBP28.56■■■□□ 2.16
LRRK1-208ENST00000532029 RGL2O15211 777 aa28.55■■■□□ 2.16
LRRK1-208ENST00000532029 CLEC4GQ6UXB4 293 aa28.55■■■□□ 2.16
LRRK1-208ENST00000532029 MMP10P09238 476 aa28.54■■■□□ 2.16
LRRK1-208ENST00000532029 PTGER2P43116 358 aa28.54■■■□□ 2.16
LRRK1-208ENST00000532029 COL24A1Q17RW2 1714 aa28.54■■■□□ 2.16
LRRK1-208ENST00000532029 BICDL1Q6ZP65 573 aa28.53■■■□□ 2.16
LRRK1-208ENST00000532029 SGIP1Q9BQI5 828 aa28.53■■■□□ 2.16
LRRK1-208ENST00000532029 DDX58O95786 925 aaKnown RBP28.52■■■□□ 2.16
LRRK1-208ENST00000532029 HLFQ16534 295 aa28.52■■■□□ 2.16
LRRK1-208ENST00000532029 ANKRD13DQ6ZTN6 518 aa28.52■■■□□ 2.16
LRRK1-208ENST00000532029 PLBD2Q8NHP8 589 aa28.52■■■□□ 2.16
LRRK1-208ENST00000532029 NFIXQ14938 502 aa28.51■■■□□ 2.15
LRRK1-208ENST00000532029 TBC1D9BQ66K14 1250 aa28.51■■■□□ 2.15
LRRK1-208ENST00000532029 PPP1R1BQ9UD71 204 aaPredicted RBP28.51■■■□□ 2.15
LRRK1-208ENST00000532029 PARP3Q9Y6F1 533 aa28.51■■■□□ 2.15
LRRK1-208ENST00000532029 TM4SF1P30408 202 aa28.5■■■□□ 2.15
LRRK1-208ENST00000532029 ALDH1L2Q3SY69 923 aa28.5■■■□□ 2.15
LRRK1-208ENST00000532029 GIGYF2Q6Y7W6 1299 aaKnown RBP28.5■■■□□ 2.15
LRRK1-208ENST00000532029 G2E3Q7L622 706 aa28.5■■■□□ 2.15
LRRK1-208ENST00000532029 FLIIQ13045 1269 aa28.49■■■□□ 2.15
LRRK1-208ENST00000532029 RIC3Q7Z5B4 369 aa28.49■■■□□ 2.15
LRRK1-208ENST00000532029 SSH1Q8WYL5 1049 aa28.49■■■□□ 2.15
LRRK1-208ENST00000532029 SETDB2Q96T68 719 aa28.49■■■□□ 2.15
LRRK1-208ENST00000532029 HSP90AB3PQ58FF7 597 aa28.48■■■□□ 2.15
LRRK1-208ENST00000532029 SMC4Q9NTJ3 1288 aa28.48■■■□□ 2.15
LRRK1-208ENST00000532029 NIP7Q9Y221 180 aaKnown RBP eCLIP28.48■■■□□ 2.15
LRRK1-208ENST00000532029 DDR1Q08345 913 aa28.47■■■□□ 2.15
LRRK1-208ENST00000532029 MRPL50Q8N5N7 158 aaKnown RBP28.47■■■□□ 2.15
LRRK1-208ENST00000532029 FKBP5Q13451 457 aaPredicted RBP28.46■■■□□ 2.15
LRRK1-208ENST00000532029 BCL2L13Q9BXK5 485 aa28.46■■■□□ 2.15
LRRK1-208ENST00000532029 CARMIL3Q8ND23 1372 aa28.46■■■□□ 2.15
LRRK1-208ENST00000532029 CACNA1FO60840 1977 aa28.46■■■□□ 2.15
LRRK1-208ENST00000532029 ATP10DQ9P241 1426 aa28.45■■■□□ 2.15
LRRK1-208ENST00000532029 POLRMTO00411 1230 aaKnown RBP28.45■■■□□ 2.14
LRRK1-208ENST00000532029 NUP98P52948 1817 aa28.44■■■□□ 2.14
LRRK1-208ENST00000532029 GPTP24298 496 aa28.44■■■□□ 2.14
LRRK1-208ENST00000532029 RARSP54136 660 aaKnown RBP28.44■■■□□ 2.14
LRRK1-208ENST00000532029 KSR2Q6VAB6 950 aa28.44■■■□□ 2.14
LRRK1-208ENST00000532029 SERPINB2P05120 415 aa28.43■■■□□ 2.14
LRRK1-208ENST00000532029 TCIRG1Q13488 830 aa28.43■■■□□ 2.14
LRRK1-208ENST00000532029 PI4KAP2A4QPH2 592 aa28.42■■■□□ 2.14
LRRK1-208ENST00000532029 ZNF34Q8IZ26 560 aa28.42■■■□□ 2.14
LRRK1-208ENST00000532029 KLHL34Q8N239 644 aa28.42■■■□□ 2.14
LRRK1-208ENST00000532029 PI4KAP1Q8N8J0 262 aa28.42■■■□□ 2.14
LRRK1-208ENST00000532029 MAP3K2Q9Y2U5 619 aa28.42■■■□□ 2.14
LRRK1-208ENST00000532029 NPHP1O15259 732 aa28.41■■■□□ 2.14
LRRK1-208ENST00000532029 ARFGEF2Q9Y6D5 1785 aa28.41■■■□□ 2.14
LRRK1-208ENST00000532029 PARP10Q53GL7 1025 aa28.4■■■□□ 2.14
LRRK1-208ENST00000532029 ADCY9O60503 1353 aa28.39■■■□□ 2.14
LRRK1-208ENST00000532029 FAM177BA6PVY3 158 aa28.39■■■□□ 2.14
LRRK1-208ENST00000532029 NBPF5PQ86XG9 351 aaPredicted RBP28.39■■■□□ 2.14
LRRK1-208ENST00000532029 METTL22Q9BUU2 404 aaPredicted RBP28.39■■■□□ 2.14
LRRK1-208ENST00000532029 ANKRD36CQ5JPF3 1778 aa28.38■■■□□ 2.13
LRRK1-208ENST00000532029 NEXNQ0ZGT2 675 aa28.38■■■□□ 2.13
LRRK1-208ENST00000532029 MYD88Q99836 296 aa28.38■■■□□ 2.13
LRRK1-208ENST00000532029 PTPRCP08575 1304 aa28.38■■■□□ 2.13
LRRK1-208ENST00000532029 UBN2Q6ZU65 1347 aa28.38■■■□□ 2.13
LRRK1-208ENST00000532029 PPP1R42Q7Z4L9 355 aa28.37■■■□□ 2.13
LRRK1-208ENST00000532029 CNBD1Q8NA66 436 aa28.37■■■□□ 2.13
LRRK1-208ENST00000532029 DNAAF4Q8WXU2 420 aa28.37■■■□□ 2.13
LRRK1-208ENST00000532029 NYXQ9GZU5 481 aa28.37■■■□□ 2.13
LRRK1-208ENST00000532029 ATP5J2-PTCD1G3V325 749 aa28.36■■■□□ 2.13
LRRK1-208ENST00000532029 BRPF1P55201 1214 aaPredicted RBP28.36■■■□□ 2.13
LRRK1-208ENST00000532029 TPTE2Q6XPS3 522 aa28.36■■■□□ 2.13
LRRK1-208ENST00000532029 ISCA1Q9BUE6 129 aa28.36■■■□□ 2.13
LRRK1-208ENST00000532029 GTF2E1P29083 439 aaPredicted RBP28.35■■■□□ 2.13
LRRK1-208ENST00000532029 SUSD4Q5VX71 490 aa28.35■■■□□ 2.13
LRRK1-208ENST00000532029 NLRP10Q86W26 655 aa28.35■■■□□ 2.13
LRRK1-208ENST00000532029 FHDC1Q9C0D6 1143 aaPredicted RBP28.35■■■□□ 2.13
LRRK1-208ENST00000532029 KIF16BQ96L93 1317 aa28.35■■■□□ 2.13
LRRK1-208ENST00000532029 ST5P78524 1137 aa28.34■■■□□ 2.13
LRRK1-208ENST00000532029 PRR5LQ6MZQ0 368 aa28.34■■■□□ 2.13
LRRK1-208ENST00000532029 CD2APQ9Y5K6 639 aa28.34■■■□□ 2.13
LRRK1-208ENST00000532029 NRXN2Q9P2S2 1712 aa28.34■■■□□ 2.13
LRRK1-208ENST00000532029 IBTKQ9P2D0 1353 aaPredicted RBP28.34■■■□□ 2.13
LRRK1-208ENST00000532029 C10orf71Q711Q0 1435 aa28.34■■■□□ 2.13
LRRK1-208ENST00000532029 F6X3S4 739 aa28.33■■■□□ 2.13
LRRK1-208ENST00000532029 BCAR3O75815 825 aa28.33■■■□□ 2.13
LRRK1-208ENST00000532029 TRIM28Q13263 835 aaKnown RBP28.33■■■□□ 2.13
LRRK1-208ENST00000532029 UTP14AQ9BVJ6 771 aaKnown RBP28.33■■■□□ 2.13
LRRK1-208ENST00000532029 NOB1Q9ULX3 412 aaKnown RBP28.33■■■□□ 2.13
LRRK1-208ENST00000532029 AFDNP55196 1824 aaKnown RBP28.33■■■□□ 2.13
LRRK1-208ENST00000532029 CCDC191Q8NCU4 936 aa28.31■■■□□ 2.12
LRRK1-208ENST00000532029 NTSR2O95665 410 aa28.3■■■□□ 2.12
LRRK1-208ENST00000532029 SLC4A10Q6U841 1118 aa28.3■■■□□ 2.12
LRRK1-208ENST00000532029 CCDC24Q8N4L8 307 aa28.3■■■□□ 2.12
LRRK1-208ENST00000532029 API5Q9BZZ5 524 aaKnown RBP28.3■■■□□ 2.12
LRRK1-208ENST00000532029 CWC25Q9NXE8 425 aaPredicted RBP28.3■■■□□ 2.12
LRRK1-208ENST00000532029 TRMT112Q9UI30 125 aaKnown RBP28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms