RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 XAGE3Q8WTP9 111 aa15.15■□□□□ 0.02
PPFIA1-220ENST00000532024 SRP68Q9UHB9 627 aaKnown RBP15.15■□□□□ 0.02
PPFIA1-220ENST00000532024 MAP3K15Q6ZN16 1313 aa15.15■□□□□ 0.02
PPFIA1-220ENST00000532024 CACNA1FO60840 1977 aa15.15■□□□□ 0.02
PPFIA1-220ENST00000532024 CAMTA2O94983 1202 aa15.14■□□□□ 0.01
PPFIA1-220ENST00000532024 MSL1Q68DK7 614 aa15.14■□□□□ 0.01
PPFIA1-220ENST00000532024 COPS6Q7L5N1 327 aa15.14■□□□□ 0.01
PPFIA1-220ENST00000532024 TCERG1O14776 1098 aaKnown RBP15.13■□□□□ 0.01
PPFIA1-220ENST00000532024 ALDH1L2Q3SY69 923 aa15.13■□□□□ 0.01
PPFIA1-220ENST00000532024 HSP90AB3PQ58FF7 597 aa15.13■□□□□ 0.01
PPFIA1-220ENST00000532024 LRP10Q7Z4F1 713 aa15.13■□□□□ 0.01
PPFIA1-220ENST00000532024 ZBTB3Q9H5J0 574 aa15.13■□□□□ 0.01
PPFIA1-220ENST00000532024 ATF5Q9Y2D1 282 aaPredicted RBP15.13■□□□□ 0.01
PPFIA1-220ENST00000532024 TTLL7Q6ZT98 887 aa15.12■□□□□ 0.01
PPFIA1-220ENST00000532024 ANKRD13DQ6ZTN6 518 aa15.12■□□□□ 0.01
PPFIA1-220ENST00000532024 PLBD2Q8NHP8 589 aa15.12■□□□□ 0.01
PPFIA1-220ENST00000532024 SMC4Q9NTJ3 1288 aa15.12■□□□□ 0.01
PPFIA1-220ENST00000532024 PARP3Q9Y6F1 533 aa15.12■□□□□ 0.01
PPFIA1-220ENST00000532024 MMP10P09238 476 aa15.11■□□□□ 0.01
PPFIA1-220ENST00000532024 FLIIQ13045 1269 aa15.11■□□□□ 0.01
PPFIA1-220ENST00000532024 FKBP8Q14318 412 aa15.11■□□□□ 0.01
PPFIA1-220ENST00000532024 RIC3Q7Z5B4 369 aa15.11■□□□□ 0.01
PPFIA1-220ENST00000532024 SETDB2Q96T68 719 aa15.11■□□□□ 0.01
PPFIA1-220ENST00000532024 PPP1R1BQ9UD71 204 aaPredicted RBP15.11■□□□□ 0.01
PPFIA1-220ENST00000532024 COL24A1Q17RW2 1714 aa15.11■□□□□ 0.01
PPFIA1-220ENST00000532024 CARMIL3Q8ND23 1372 aa15.11■□□□□ 0.01
PPFIA1-220ENST00000532024 ATP10DQ9P241 1426 aa15.1■□□□□ 0.01
PPFIA1-220ENST00000532024 NPHP1O15259 732 aa15.1■□□□□ 0.01
PPFIA1-220ENST00000532024 FKBP5Q13451 457 aaPredicted RBP15.1■□□□□ 0.01
PPFIA1-220ENST00000532024 GIGYF2Q6Y7W6 1299 aaKnown RBP15.1■□□□□ 0.01
PPFIA1-220ENST00000532024 PHAXQ9H814 394 aaKnown RBP15.1■□□□□ 0.01
PPFIA1-220ENST00000532024 KIF16BQ96L93 1317 aa15.1■□□□□ 0.01
PPFIA1-220ENST00000532024 NEXNQ0ZGT2 675 aa15.09■□□□□ 0.01
PPFIA1-220ENST00000532024 BICDL1Q6ZP65 573 aa15.09■□□□□ 0.01
PPFIA1-220ENST00000532024 SSH1Q8WYL5 1049 aa15.09■□□□□ 0.01
PPFIA1-220ENST00000532024 BCL2L12Q9HB09 334 aa15.09■□□□□ 0.01
PPFIA1-220ENST00000532024 NIP7Q9Y221 180 aaKnown RBP eCLIP15.09■□□□□ 0.01
PPFIA1-220ENST00000532024 PTPRCP08575 1304 aa15.09■□□□□ 0.01
PPFIA1-220ENST00000532024 ARFGEF2Q9Y6D5 1785 aa15.08■□□□□ 0.01
PPFIA1-220ENST00000532024 NFIXQ14938 502 aa15.08■□□□□ 0
PPFIA1-220ENST00000532024 KSR2Q6VAB6 950 aa15.08■□□□□ 0
PPFIA1-220ENST00000532024 ANKRD36CQ5JPF3 1778 aa15.08■□□□□ 0
PPFIA1-220ENST00000532024 NUP98P52948 1817 aa15.08■□□□□ 0
PPFIA1-220ENST00000532024 PTGER2P43116 358 aa15.07■□□□□ 0
PPFIA1-220ENST00000532024 RARSP54136 660 aaKnown RBP15.07■□□□□ 0
PPFIA1-220ENST00000532024 HLFQ16534 295 aa15.07■□□□□ 0
PPFIA1-220ENST00000532024 PARP10Q53GL7 1025 aa15.07■□□□□ 0
PPFIA1-220ENST00000532024 TBC1D9BQ66K14 1250 aa15.07■□□□□ 0
PPFIA1-220ENST00000532024 MRPL50Q8N5N7 158 aaKnown RBP15.07■□□□□ 0
PPFIA1-220ENST00000532024 BCL2L13Q9BXK5 485 aa15.07■□□□□ 0
PPFIA1-220ENST00000532024 NYXQ9GZU5 481 aa15.07■□□□□ 0
PPFIA1-220ENST00000532024 PI4KAP2A4QPH2 592 aa15.06■□□□□ 0
PPFIA1-220ENST00000532024 TM4SF1P30408 202 aa15.06■□□□□ 0
PPFIA1-220ENST00000532024 TCIRG1Q13488 830 aa15.06■□□□□ 0
PPFIA1-220ENST00000532024 G2E3Q7L622 706 aa15.06■□□□□ 0
PPFIA1-220ENST00000532024 NBPF5PQ86XG9 351 aaPredicted RBP15.06■□□□□ 0
PPFIA1-220ENST00000532024 PI4KAP1Q8N8J0 262 aa15.06■□□□□ 0
PPFIA1-220ENST00000532024 SGIP1Q9BQI5 828 aa15.06■□□□□ 0
PPFIA1-220ENST00000532024 MAP3K2Q9Y2U5 619 aa15.06■□□□□ 0
PPFIA1-220ENST00000532024 IBTKQ9P2D0 1353 aaPredicted RBP15.06■□□□□ 0
PPFIA1-220ENST00000532024 POLRMTO00411 1230 aaKnown RBP15.05■□□□□ -0
PPFIA1-220ENST00000532024 IPO8O15397 1037 aaKnown RBP15.05■□□□□ -0
PPFIA1-220ENST00000532024 SERPINB2P05120 415 aa15.05■□□□□ -0
PPFIA1-220ENST00000532024 GPTP24298 496 aa15.05■□□□□ -0
PPFIA1-220ENST00000532024 GTF2E1P29083 439 aaPredicted RBP15.05■□□□□ -0
PPFIA1-220ENST00000532024 BRPF1P55201 1214 aaPredicted RBP15.05■□□□□ -0
PPFIA1-220ENST00000532024 DDR1Q08345 913 aa15.05■□□□□ -0
PPFIA1-220ENST00000532024 PPP1R42Q7Z4L9 355 aa15.05■□□□□ -0
PPFIA1-220ENST00000532024 CNBD1Q8NA66 436 aa15.05■□□□□ -0
PPFIA1-220ENST00000532024 RNF123Q5XPI4 1314 aa15.05■□□□□ -0
PPFIA1-220ENST00000532024 ADCY9O60503 1353 aa15.04■□□□□ -0
PPFIA1-220ENST00000532024 ST5P78524 1137 aa15.04■□□□□ -0
PPFIA1-220ENST00000532024 TPTE2Q6XPS3 522 aa15.04■□□□□ -0
PPFIA1-220ENST00000532024 ZNF34Q8IZ26 560 aa15.04■□□□□ -0
PPFIA1-220ENST00000532024 DNAAF4Q8WXU2 420 aa15.04■□□□□ -0
PPFIA1-220ENST00000532024 METTL22Q9BUU2 404 aaPredicted RBP15.04■□□□□ -0
PPFIA1-220ENST00000532024 API5Q9BZZ5 524 aaKnown RBP15.04■□□□□ -0
PPFIA1-220ENST00000532024 KLHL34Q8N239 644 aa15.03■□□□□ -0
PPFIA1-220ENST00000532024 MYD88Q99836 296 aa15.03■□□□□ -0
PPFIA1-220ENST00000532024 HSP90B1P14625 803 aaKnown RBP15.02■□□□□ -0
PPFIA1-220ENST00000532024 TRIM28Q13263 835 aaKnown RBP15.02■□□□□ -0
PPFIA1-220ENST00000532024 CCDC191Q8NCU4 936 aa15.02■□□□□ -0
PPFIA1-220ENST00000532024 UTP14AQ9BVJ6 771 aaKnown RBP15.02■□□□□ -0
PPFIA1-220ENST00000532024 RCAN3Q9UKA8 241 aa15.02■□□□□ -0
PPFIA1-220ENST00000532024 CD2APQ9Y5K6 639 aa15.02■□□□□ -0
PPFIA1-220ENST00000532024 NRXN2Q9P2S2 1712 aa15.02□□□□□ -0.01
PPFIA1-220ENST00000532024 PXDNLA1KZ92 1463 aa15.01□□□□□ -0.01
PPFIA1-220ENST00000532024 C10orf71Q711Q0 1435 aa15.01□□□□□ -0.01
PPFIA1-220ENST00000532024 UBN2Q6ZU65 1347 aa15.01□□□□□ -0.01
PPFIA1-220ENST00000532024 FAM177BA6PVY3 158 aa15.01□□□□□ -0.01
PPFIA1-220ENST00000532024 NLRP10Q86W26 655 aa15.01□□□□□ -0.01
PPFIA1-220ENST00000532024 LINS1Q8NG48 757 aa15.01□□□□□ -0.01
PPFIA1-220ENST00000532024 ARHGAP45Q92619 1136 aa15.01□□□□□ -0.01
PPFIA1-220ENST00000532024 FRAT1Q92837 279 aaPredicted RBP15.01□□□□□ -0.01
PPFIA1-220ENST00000532024 ISCA1Q9BUE6 129 aa15.01□□□□□ -0.01
PPFIA1-220ENST00000532024 CWC25Q9NXE8 425 aaPredicted RBP15.01□□□□□ -0.01
PPFIA1-220ENST00000532024 TRMT112Q9UI30 125 aaKnown RBP15.01□□□□□ -0.01
PPFIA1-220ENST00000532024 AFDNP55196 1824 aaKnown RBP15.01□□□□□ -0.01
PPFIA1-220ENST00000532024 ATP5J2-PTCD1G3V325 749 aa15□□□□□ -0.01
PPFIA1-220ENST00000532024 PRR5LQ6MZQ0 368 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms