RNA–Protein interactions for RNA: ENST00000531243.2

PABPC4-225, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 4

Gene PABPC4, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-225	ENST00000531243	GYS1	P13807	737 aa		27.25	■■□□□ 1.95
PABPC4-225	ENST00000531243	PDGFD	Q9GZP0	370 aa	Predicted RBP	27.25	■■□□□ 1.95
PABPC4-225	ENST00000531243	SRP68	Q9UHB9	627 aa	Known RBP	27.25	■■□□□ 1.95
PABPC4-225	ENST00000531243	TCERG1	O14776	1098 aa	Known RBP	27.24	■■□□□ 1.95
PABPC4-225	ENST00000531243	ZBTB7A	O95365	584 aa		27.24	■■□□□ 1.95
PABPC4-225	ENST00000531243	POLD1	P28340	1107 aa		27.24	■■□□□ 1.95
PABPC4-225	ENST00000531243	SPON1	Q9HCB6	807 aa		27.24	■■□□□ 1.95
PABPC4-225	ENST00000531243	CAMTA2	O94983	1202 aa		27.23	■■□□□ 1.95
PABPC4-225	ENST00000531243	TTLL7	Q6ZT98	887 aa		27.23	■■□□□ 1.95
PABPC4-225	ENST00000531243	COL24A1	Q17RW2	1714 aa		27.23	■■□□□ 1.95
PABPC4-225	ENST00000531243	ANKRD13D	Q6ZTN6	518 aa		27.22	■■□□□ 1.95
PABPC4-225	ENST00000531243	PHAX	Q9H814	394 aa	Known RBP	27.22	■■□□□ 1.95
PABPC4-225	ENST00000531243	HSP90AB3P	Q58FF7	597 aa		27.21	■■□□□ 1.95
PABPC4-225	ENST00000531243	PLBD2	Q8NHP8	589 aa		27.21	■■□□□ 1.95
PABPC4-225	ENST00000531243	ZBTB3	Q9H5J0	574 aa		27.21	■■□□□ 1.95
PABPC4-225	ENST00000531243	FLII	Q13045	1269 aa		27.2	■■□□□ 1.94
PABPC4-225	ENST00000531243	RIC3	Q7Z5B4	369 aa		27.2	■■□□□ 1.94
PABPC4-225	ENST00000531243	SMC4	Q9NTJ3	1288 aa		27.2	■■□□□ 1.94
PABPC4-225	ENST00000531243	ATF5	Q9Y2D1	282 aa	Predicted RBP	27.2	■■□□□ 1.94
PABPC4-225	ENST00000531243	MSL1	Q68DK7	614 aa		27.19	■■□□□ 1.94
PABPC4-225	ENST00000531243	GIGYF2	Q6Y7W6	1299 aa	Known RBP	27.19	■■□□□ 1.94
PABPC4-225	ENST00000531243	SSH1	Q8WYL5	1049 aa		27.19	■■□□□ 1.94
PABPC4-225	ENST00000531243	ANKRD36C	Q5JPF3	1778 aa		27.19	■■□□□ 1.94
PABPC4-225	ENST00000531243	ARFGEF2	Q9Y6D5	1785 aa		27.19	■■□□□ 1.94
PABPC4-225	ENST00000531243	FKBP8	Q14318	412 aa		27.18	■■□□□ 1.94
PABPC4-225	ENST00000531243	BCL2L12	Q9HB09	334 aa		27.18	■■□□□ 1.94
PABPC4-225	ENST00000531243	RARS	P54136	660 aa	Known RBP	27.17	■■□□□ 1.94
PABPC4-225	ENST00000531243	FKBP5	Q13451	457 aa	Predicted RBP	27.17	■■□□□ 1.94
PABPC4-225	ENST00000531243	MRPL50	Q8N5N7	158 aa	Known RBP	27.17	■■□□□ 1.94
PABPC4-225	ENST00000531243	PARP3	Q9Y6F1	533 aa		27.17	■■□□□ 1.94
PABPC4-225	ENST00000531243	KSR2	Q6VAB6	950 aa		27.16	■■□□□ 1.94
PABPC4-225	ENST00000531243	SETDB2	Q96T68	719 aa		27.16	■■□□□ 1.94
PABPC4-225	ENST00000531243	HLF	Q16534	295 aa		27.15	■■□□□ 1.94
PABPC4-225	ENST00000531243	PTPRC	P08575	1304 aa		27.15	■■□□□ 1.94
PABPC4-225	ENST00000531243	KIF16B	Q96L93	1317 aa		27.15	■■□□□ 1.94
PABPC4-225	ENST00000531243	BRPF1	P55201	1214 aa	Predicted RBP	27.14	■■□□□ 1.94
PABPC4-225	ENST00000531243	G2E3	Q7L622	706 aa		27.14	■■□□□ 1.94
PABPC4-225	ENST00000531243	BCL2L13	Q9BXK5	485 aa		27.14	■■□□□ 1.94
PABPC4-225	ENST00000531243	MMP10	P09238	476 aa		27.13	■■□□□ 1.93
PABPC4-225	ENST00000531243	NEXN	Q0ZGT2	675 aa		27.13	■■□□□ 1.93
PABPC4-225	ENST00000531243	TBC1D9B	Q66K14	1250 aa		27.13	■■□□□ 1.93
PABPC4-225	ENST00000531243	BICDL1	Q6ZP65	573 aa		27.13	■■□□□ 1.93
PABPC4-225	ENST00000531243	NIP7	Q9Y221	180 aa	Known RBP eCLIP	27.13	■■□□□ 1.93
PABPC4-225	ENST00000531243	ATP10D	Q9P241	1426 aa		27.13	■■□□□ 1.93
PABPC4-225	ENST00000531243	CARMIL3	Q8ND23	1372 aa		27.12	■■□□□ 1.93
PABPC4-225	ENST00000531243	PI4KAP2	A4QPH2	592 aa		27.12	■■□□□ 1.93
PABPC4-225	ENST00000531243	TM4SF1	P30408	202 aa		27.12	■■□□□ 1.93
PABPC4-225	ENST00000531243	NFIX	Q14938	502 aa		27.12	■■□□□ 1.93
PABPC4-225	ENST00000531243	PI4KAP1	Q8N8J0	262 aa		27.12	■■□□□ 1.93
PABPC4-225	ENST00000531243	TCIRG1	Q13488	830 aa		27.11	■■□□□ 1.93
PABPC4-225	ENST00000531243	PARP10	Q53GL7	1025 aa		27.11	■■□□□ 1.93
PABPC4-225	ENST00000531243	MAP3K2	Q9Y2U5	619 aa		27.11	■■□□□ 1.93
PABPC4-225	ENST00000531243	LRP5	O75197	1615 aa		27.11	■■□□□ 1.93
PABPC4-225	ENST00000531243	NPHP1	O15259	732 aa		27.1	■■□□□ 1.93
PABPC4-225	ENST00000531243	IPO8	O15397	1037 aa	Known RBP	27.1	■■□□□ 1.93
PABPC4-225	ENST00000531243	PPP1R1B	Q9UD71	204 aa	Predicted RBP	27.1	■■□□□ 1.93
PABPC4-225	ENST00000531243	AFDN	P55196	1824 aa	Known RBP	27.1	■■□□□ 1.93
PABPC4-225	ENST00000531243	PTGER2	P43116	358 aa		27.09	■■□□□ 1.93
PABPC4-225	ENST00000531243	PPP1R42	Q7Z4L9	355 aa		27.09	■■□□□ 1.93
PABPC4-225	ENST00000531243	DNAAF4	Q8WXU2	420 aa		27.09	■■□□□ 1.93
PABPC4-225	ENST00000531243	METTL22	Q9BUU2	404 aa	Predicted RBP	27.09	■■□□□ 1.93
PABPC4-225	ENST00000531243	ZNF34	Q8IZ26	560 aa		27.08	■■□□□ 1.93
PABPC4-225	ENST00000531243	SGIP1	Q9BQI5	828 aa		27.08	■■□□□ 1.93
PABPC4-225	ENST00000531243	NYX	Q9GZU5	481 aa		27.08	■■□□□ 1.93
PABPC4-225	ENST00000531243	POLRMT	O00411	1230 aa	Known RBP	27.07	■■□□□ 1.92
PABPC4-225	ENST00000531243	SERPINB2	P05120	415 aa		27.07	■■□□□ 1.92
PABPC4-225	ENST00000531243	ARHGAP45	Q92619	1136 aa		27.07	■■□□□ 1.92
PABPC4-225	ENST00000531243	API5	Q9BZZ5	524 aa	Known RBP	27.07	■■□□□ 1.92
PABPC4-225	ENST00000531243	RCAN3	Q9UKA8	241 aa		27.07	■■□□□ 1.92
PABPC4-225	ENST00000531243	ADCY9	O60503	1353 aa		27.07	■■□□□ 1.92
PABPC4-225	ENST00000531243	GPT	P24298	496 aa		27.06	■■□□□ 1.92
PABPC4-225	ENST00000531243	TPTE2	Q6XPS3	522 aa		27.06	■■□□□ 1.92
PABPC4-225	ENST00000531243	NBPF5P	Q86XG9	351 aa	Predicted RBP	27.06	■■□□□ 1.92
PABPC4-225	ENST00000531243	MYD88	Q99836	296 aa		27.06	■■□□□ 1.92
PABPC4-225	ENST00000531243	NOB1	Q9ULX3	412 aa	Known RBP	27.06	■■□□□ 1.92
PABPC4-225	ENST00000531243	NRXN2	Q9P2S2	1712 aa		27.06	■■□□□ 1.92
PABPC4-225	ENST00000531243	GTF2E1	P29083	439 aa	Predicted RBP	27.05	■■□□□ 1.92
PABPC4-225	ENST00000531243	BCAR3	O75815	825 aa		27.04	■■□□□ 1.92
PABPC4-225	ENST00000531243	DDR1	Q08345	913 aa		27.04	■■□□□ 1.92
PABPC4-225	ENST00000531243	TRIM28	Q13263	835 aa	Known RBP	27.04	■■□□□ 1.92
PABPC4-225	ENST00000531243	ISCA1	Q9BUE6	129 aa		27.04	■■□□□ 1.92
PABPC4-225	ENST00000531243	IBTK	Q9P2D0	1353 aa	Predicted RBP	27.04	■■□□□ 1.92
PABPC4-225	ENST00000531243	ST5	P78524	1137 aa		27.03	■■□□□ 1.92
PABPC4-225	ENST00000531243	RNF123	Q5XPI4	1314 aa		27.03	■■□□□ 1.92
PABPC4-225	ENST00000531243	CNBD1	Q8NA66	436 aa		27.03	■■□□□ 1.92
PABPC4-225	ENST00000531243	CCDC191	Q8NCU4	936 aa		27.03	■■□□□ 1.92
PABPC4-225	ENST00000531243	FRAT1	Q92837	279 aa	Predicted RBP	27.03	■■□□□ 1.92
PABPC4-225	ENST00000531243	UTP14A	Q9BVJ6	771 aa	Known RBP	27.02	■■□□□ 1.92
PABPC4-225	ENST00000531243	UBN2	Q6ZU65	1347 aa		27.01	■■□□□ 1.91
PABPC4-225	ENST00000531243	ATP5J2-PTCD1	G3V325	749 aa		27.01	■■□□□ 1.91
PABPC4-225	ENST00000531243	ZKSCAN2	Q63HK3	967 aa		27.01	■■□□□ 1.91
PABPC4-225	ENST00000531243	SLC4A10	Q6U841	1118 aa		27.01	■■□□□ 1.91
PABPC4-225	ENST00000531243	NLRP10	Q86W26	655 aa		27.01	■■□□□ 1.91
PABPC4-225	ENST00000531243	LINS1	Q8NG48	757 aa		27.01	■■□□□ 1.91
PABPC4-225	ENST00000531243	FAM177B	A6PVY3	158 aa		27	■■□□□ 1.91
PABPC4-225	ENST00000531243		F6X3S4	739 aa		27	■■□□□ 1.91
PABPC4-225	ENST00000531243	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	27	■■□□□ 1.91
PABPC4-225	ENST00000531243	CWC25	Q9NXE8	425 aa	Predicted RBP	27	■■□□□ 1.91
PABPC4-225	ENST00000531243	PXDNL	A1KZ92	1463 aa		27	■■□□□ 1.91
PABPC4-225	ENST00000531243	KIF13B	Q9NQT8	1826 aa		27	■■□□□ 1.91

Retrieved 100 of 20,778 RNA–protein pairs in 201.3 ms