RNA–Protein interactions for RNA: ENST00000530337.5

FDFT1-217, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 3

Gene FDFT1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-217ENST00000530337 SRGNP10124 158 aa23.69■■□□□ 1.38
FDFT1-217ENST00000530337 PRPF40BQ6NWY9 871 aaKnown RBP23.69■■□□□ 1.38
FDFT1-217ENST00000530337 RTF1Q92541 710 aaKnown RBP23.69■■□□□ 1.38
FDFT1-217ENST00000530337 PRAMEF22A3QJZ6 481 aa23.68■■□□□ 1.38
FDFT1-217ENST00000530337 MASTLQ96GX5 879 aa23.68■■□□□ 1.38
FDFT1-217ENST00000530337 CCDC88AQ3V6T2 1871 aa23.67■■□□□ 1.38
FDFT1-217ENST00000530337 SNRPA1P09661 255 aaKnown RBP23.67■■□□□ 1.38
FDFT1-217ENST00000530337 U2AF1L5P0DN76 240 aaPredicted RBP23.67■■□□□ 1.38
FDFT1-217ENST00000530337 U2AF1Q01081 240 aaKnown RBP eCLIP23.67■■□□□ 1.38
FDFT1-217ENST00000530337 MCM10Q7L590 875 aa23.67■■□□□ 1.38
FDFT1-217ENST00000530337 NBPF5PQ86XG9 351 aaPredicted RBP23.67■■□□□ 1.38
FDFT1-217ENST00000530337 COL11A2P13942 1736 aaPredicted RBP23.67■■□□□ 1.38
FDFT1-217ENST00000530337 SOGA3Q5TF21 947 aa23.66■■□□□ 1.38
FDFT1-217ENST00000530337 CLEC4GQ6UXB4 293 aa23.66■■□□□ 1.38
FDFT1-217ENST00000530337 ZNF652Q9Y2D9 606 aa23.65■■□□□ 1.38
FDFT1-217ENST00000530337 PCNTO95613 3336 aa23.65■■□□□ 1.38
FDFT1-217ENST00000530337 DDNO94850 711 aaPredicted RBP23.64■■□□□ 1.37
FDFT1-217ENST00000530337 FER1L6Q2WGJ9 1857 aa23.63■■□□□ 1.37
FDFT1-217ENST00000530337 SLX4Q8IY92 1834 aa23.62■■□□□ 1.37
FDFT1-217ENST00000530337 PPP2R1AP30153 589 aa23.62■■□□□ 1.37
FDFT1-217ENST00000530337 DCTN1Q14203 1278 aa23.62■■□□□ 1.37
FDFT1-217ENST00000530337 CHADLQ6NUI6 762 aa23.62■■□□□ 1.37
FDFT1-217ENST00000530337 NPR1P16066 1061 aa23.61■■□□□ 1.37
FDFT1-217ENST00000530337 TPTE2Q6XPS3 522 aa23.61■■□□□ 1.37
FDFT1-217ENST00000530337 C7orf43Q8WVR3 580 aa23.61■■□□□ 1.37
FDFT1-217ENST00000530337 NBPF26B4DH59 902 aa23.6■■□□□ 1.37
FDFT1-217ENST00000530337 HSPA1AP0DMV8 641 aaKnown RBP23.6■■□□□ 1.37
FDFT1-217ENST00000530337 HSPA1BP0DMV9 641 aaKnown RBP23.6■■□□□ 1.37
FDFT1-217ENST00000530337 CCDC93Q567U6 631 aa23.6■■□□□ 1.37
FDFT1-217ENST00000530337 NBPF10Q6P3W6 841 aaKnown RBP23.6■■□□□ 1.37
FDFT1-217ENST00000530337 TNS4Q8IZW8 715 aa23.6■■□□□ 1.37
FDFT1-217ENST00000530337 NBPF15Q8N660 670 aa23.6■■□□□ 1.37
FDFT1-217ENST00000530337 NIP7Q9Y221 180 aaKnown RBP eCLIP23.6■■□□□ 1.37
FDFT1-217ENST00000530337 BCORQ6W2J9 1755 aa23.6■■□□□ 1.37
FDFT1-217ENST00000530337 HTATSF1O43719 755 aaKnown RBP23.59■■□□□ 1.37
FDFT1-217ENST00000530337 POTEIP0CG38 1075 aa23.59■■□□□ 1.37
FDFT1-217ENST00000530337 POTEJP0CG39 1038 aa23.59■■□□□ 1.37
FDFT1-217ENST00000530337 KLRG2A4D1S0 409 aaPredicted RBP23.58■■□□□ 1.37
FDFT1-217ENST00000530337 FAM177BA6PVY3 158 aa23.58■■□□□ 1.37
FDFT1-217ENST00000530337 RGL2O15211 777 aa23.58■■□□□ 1.37
FDFT1-217ENST00000530337 DICER1Q9UPY3 1922 aaKnown RBP23.58■■□□□ 1.37
FDFT1-217ENST00000530337 IQCA1LA6NCM1 817 aa23.57■■□□□ 1.36
FDFT1-217ENST00000530337 TAF7Q15545 349 aaPredicted RBP23.57■■□□□ 1.36
FDFT1-217ENST00000530337 CREBZFQ9NS37 354 aa23.57■■□□□ 1.36
FDFT1-217ENST00000530337 CAPN15O75808 1086 aa23.56■■□□□ 1.36
FDFT1-217ENST00000530337 MIS18AQ9NYP9 233 aa23.56■■□□□ 1.36
FDFT1-217ENST00000530337 FKBP4Q02790 459 aaKnown RBP eCLIP23.55■■□□□ 1.36
FDFT1-217ENST00000530337 L3MBTL3Q96JM7 780 aaPredicted RBP23.55■■□□□ 1.36
FDFT1-217ENST00000530337 ZNF277Q9NRM2 450 aaPredicted RBP23.55■■□□□ 1.36
FDFT1-217ENST00000530337 GTF2E1P29083 439 aaPredicted RBP23.54■■□□□ 1.36
FDFT1-217ENST00000530337 HLFQ16534 295 aa23.54■■□□□ 1.36
FDFT1-217ENST00000530337 OLFM4Q6UX06 510 aa23.54■■□□□ 1.36
FDFT1-217ENST00000530337 MKRN1Q9UHC7 482 aaKnown RBP23.54■■□□□ 1.36
FDFT1-217ENST00000530337 LDHDQ86WU2 507 aa23.53■■□□□ 1.36
FDFT1-217ENST00000530337 RTKN2Q8IZC4 609 aa23.53■■□□□ 1.36
FDFT1-217ENST00000530337 TAF1DQ9H5J8 278 aaPredicted RBP23.53■■□□□ 1.36
FDFT1-217ENST00000530337 CACNA1SQ13698 1873 aa23.52■■□□□ 1.36
FDFT1-217ENST00000530337 ARFGEF2Q9Y6D5 1785 aa23.52■■□□□ 1.36
FDFT1-217ENST00000530337 ALDH1B1P30837 517 aa23.51■■□□□ 1.35
FDFT1-217ENST00000530337 NGEFQ8N5V2 710 aa23.51■■□□□ 1.35
FDFT1-217ENST00000530337 ZNF541Q9H0D2 1346 aa23.51■■□□□ 1.35
FDFT1-217ENST00000530337 NEFMP07197 916 aa23.5■■□□□ 1.35
FDFT1-217ENST00000530337 EAPPQ56P03 285 aaPredicted RBP23.49■■□□□ 1.35
FDFT1-217ENST00000530337 PNISRQ8TF01 805 aaKnown RBP23.49■■□□□ 1.35
FDFT1-217ENST00000530337 HACL1Q9UJ83 578 aa23.48■■□□□ 1.35
FDFT1-217ENST00000530337 PASKQ96RG2 1323 aa23.48■■□□□ 1.35
FDFT1-217ENST00000530337 IARSP41252 1262 aaKnown RBP23.47■■□□□ 1.35
FDFT1-217ENST00000530337 NUTM1Q86Y26 1132 aa23.47■■□□□ 1.35
FDFT1-217ENST00000530337 SYNE4Q8N205 404 aa23.47■■□□□ 1.35
FDFT1-217ENST00000530337 NYXQ9GZU5 481 aa23.47■■□□□ 1.35
FDFT1-217ENST00000530337 ERVV-1B6SEH8 477 aa23.46■■□□□ 1.35
FDFT1-217ENST00000530337 CRY2Q49AN0 593 aa23.46■■□□□ 1.35
FDFT1-217ENST00000530337 CLEC11AQ9Y240 323 aa23.46■■□□□ 1.35
FDFT1-217ENST00000530337 RRP7AQ9Y3A4 280 aaKnown RBP23.46■■□□□ 1.35
FDFT1-217ENST00000530337 CNTNAP1P78357 1384 aa23.45■■□□□ 1.34
FDFT1-217ENST00000530337 ABCC12Q96J65 1359 aa23.45■■□□□ 1.34
FDFT1-217ENST00000530337 MAP3K15Q6ZN16 1313 aa23.45■■□□□ 1.34
FDFT1-217ENST00000530337 FZD9O00144 591 aa23.45■■□□□ 1.34
FDFT1-217ENST00000530337 EPHX2P34913 555 aa23.45■■□□□ 1.34
FDFT1-217ENST00000530337 KIF6Q6ZMV9 814 aa23.45■■□□□ 1.34
FDFT1-217ENST00000530337 TMEM88BA6NKF7 163 aa23.44■■□□□ 1.34
FDFT1-217ENST00000530337 ITGBL1O95965 494 aaPredicted RBP23.44■■□□□ 1.34
FDFT1-217ENST00000530337 MYL6BP14649 208 aa23.44■■□□□ 1.34
FDFT1-217ENST00000530337 EIF4A1P60842 406 aaKnown RBP23.44■■□□□ 1.34
FDFT1-217ENST00000530337 TTLL7Q6ZT98 887 aa23.44■■□□□ 1.34
FDFT1-217ENST00000530337 PSMD1Q99460 953 aa23.44■■□□□ 1.34
FDFT1-217ENST00000530337 SCN4AP35499 1836 aa23.44■■□□□ 1.34
FDFT1-217ENST00000530337 RNF123Q5XPI4 1314 aa23.43■■□□□ 1.34
FDFT1-217ENST00000530337 JDP2Q8WYK2 163 aa23.43■■□□□ 1.34
FDFT1-217ENST00000530337 THUMPD2Q9BTF0 503 aaKnown RBP23.43■■□□□ 1.34
FDFT1-217ENST00000530337 GPTP24298 496 aa23.42■■□□□ 1.34
FDFT1-217ENST00000530337 CC2D2BQ6DHV5 1058 aa23.42■■□□□ 1.34
FDFT1-217ENST00000530337 PNMA8AQ86V59 439 aaPredicted RBP23.42■■□□□ 1.34
FDFT1-217ENST00000530337 GPC2Q8N158 579 aa23.42■■□□□ 1.34
FDFT1-217ENST00000530337 RPGRQ92834 1020 aaKnown RBP23.42■■□□□ 1.34
FDFT1-217ENST00000530337 PLEKHF1Q96S99 279 aa23.42■■□□□ 1.34
FDFT1-217ENST00000530337 ZBTB3Q9H5J0 574 aa23.42■■□□□ 1.34
FDFT1-217ENST00000530337 NFE2L2Q16236 605 aa23.41■■□□□ 1.34
FDFT1-217ENST00000530337 HOXA10P31260 410 aaPredicted RBP23.4■■□□□ 1.34
FDFT1-217ENST00000530337 VEGFBP49765 207 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms