RNA–Protein interactions for RNA: ENST00000529640.5

UBXN1-210, Transcript of UBX domain protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBXN1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-210ENST00000529640 TMEM88BA6NKF7 163 aa22.85■■□□□ 1.25
UBXN1-210ENST00000529640 VEGFBP49765 207 aa22.85■■□□□ 1.25
UBXN1-210ENST00000529640 ST5P78524 1137 aa22.85■■□□□ 1.25
UBXN1-210ENST00000529640 ZNF790Q6PG37 636 aa22.85■■□□□ 1.25
UBXN1-210ENST00000529640 MASTLQ96GX5 879 aa22.85■■□□□ 1.25
UBXN1-210ENST00000529640 ZNF330Q9Y3S2 320 aaPredicted RBP22.85■■□□□ 1.25
UBXN1-210ENST00000529640 NPHP1O15259 732 aa22.84■■□□□ 1.25
UBXN1-210ENST00000529640 CAMTA2O94983 1202 aa22.84■■□□□ 1.25
UBXN1-210ENST00000529640 ITGBL1O95965 494 aaPredicted RBP22.83■■□□□ 1.25
UBXN1-210ENST00000529640 TEFQ10587 303 aa22.82■■□□□ 1.24
UBXN1-210ENST00000529640 C7orf43Q8WVR3 580 aa22.82■■□□□ 1.24
UBXN1-210ENST00000529640 WBP1LQ9NX94 342 aa22.82■■□□□ 1.24
UBXN1-210ENST00000529640 CLSPNQ9HAW4 1339 aa22.82■■□□□ 1.24
UBXN1-210ENST00000529640 DIAPH1O60610 1272 aaKnown RBP22.81■■□□□ 1.24
UBXN1-210ENST00000529640 CCDC93Q567U6 631 aa22.81■■□□□ 1.24
UBXN1-210ENST00000529640 NPM2Q86SE8 214 aaKnown RBP22.81■■□□□ 1.24
UBXN1-210ENST00000529640 A1BGP04217 495 aa22.8■■□□□ 1.24
UBXN1-210ENST00000529640 IL17REQ8NFR9 667 aa22.8■■□□□ 1.24
UBXN1-210ENST00000529640 FMNL2Q96PY5 1086 aa22.8■■□□□ 1.24
UBXN1-210ENST00000529640 LBX1P52954 281 aa22.79■■□□□ 1.24
UBXN1-210ENST00000529640 ZNF541Q9H0D2 1346 aa22.79■■□□□ 1.24
UBXN1-210ENST00000529640 GNAT3A8MTJ3 354 aa22.78■■□□□ 1.24
UBXN1-210ENST00000529640 SLC34A2O95436 690 aa22.78■■□□□ 1.24
UBXN1-210ENST00000529640 FKBP4Q02790 459 aaKnown RBP eCLIP22.78■■□□□ 1.24
UBXN1-210ENST00000529640 EAPPQ56P03 285 aaPredicted RBP22.78■■□□□ 1.24
UBXN1-210ENST00000529640 DZIP3Q86Y13 1208 aaKnown RBP22.78■■□□□ 1.24
UBXN1-210ENST00000529640 HACL1Q9UJ83 578 aa22.78■■□□□ 1.24
UBXN1-210ENST00000529640 RASSF10A6NK89 507 aa22.77■■□□□ 1.24
UBXN1-210ENST00000529640 COL3A1P02461 1466 aaPredicted RBP22.77■■□□□ 1.24
UBXN1-210ENST00000529640 NPR1P16066 1061 aa22.76■■□□□ 1.23
UBXN1-210ENST00000529640 EPHX2P34913 555 aa22.76■■□□□ 1.23
UBXN1-210ENST00000529640 NBPF5PQ86XG9 351 aaPredicted RBP22.76■■□□□ 1.23
UBXN1-210ENST00000529640 GAS2L2Q8NHY3 880 aa22.76■■□□□ 1.23
UBXN1-210ENST00000529640 CEMIPQ8WUJ3 1361 aa22.76■■□□□ 1.23
UBXN1-210ENST00000529640 THSD7BQ9C0I4 1608 aa22.75■■□□□ 1.23
UBXN1-210ENST00000529640 KLRG2A4D1S0 409 aaPredicted RBP22.75■■□□□ 1.23
UBXN1-210ENST00000529640 HSPA8P11142 646 aaKnown RBP22.75■■□□□ 1.23
UBXN1-210ENST00000529640 CLEC4GQ6UXB4 293 aa22.75■■□□□ 1.23
UBXN1-210ENST00000529640 ZNF277Q9NRM2 450 aaPredicted RBP22.75■■□□□ 1.23
UBXN1-210ENST00000529640 PNMA8AQ86V59 439 aaPredicted RBP22.74■■□□□ 1.23
UBXN1-210ENST00000529640 CLEC11AQ9Y240 323 aa22.74■■□□□ 1.23
UBXN1-210ENST00000529640 DEFB115Q30KQ5 88 aa22.73■■□□□ 1.23
UBXN1-210ENST00000529640 RTKN2Q8IZC4 609 aa22.73■■□□□ 1.23
UBXN1-210ENST00000529640 ABHD8Q96I13 439 aa22.73■■□□□ 1.23
UBXN1-210ENST00000529640 MAP2K1Q02750 393 aaPredicted RBP22.72■■□□□ 1.23
UBXN1-210ENST00000529640 CNTROBQ8N137 903 aa22.72■■□□□ 1.23
UBXN1-210ENST00000529640 ZNF652Q9Y2D9 606 aa22.72■■□□□ 1.23
UBXN1-210ENST00000529640 RNF123Q5XPI4 1314 aa22.72■■□□□ 1.23
UBXN1-210ENST00000529640 FZD9O00144 591 aa22.71■■□□□ 1.23
UBXN1-210ENST00000529640 MAP1SQ66K74 1059 aaPredicted RBP22.71■■□□□ 1.23
UBXN1-210ENST00000529640 WDR33Q9C0J8 1336 aaKnown RBP22.71■■□□□ 1.23
UBXN1-210ENST00000529640 KCNQ3O43525 872 aa22.7■■□□□ 1.22
UBXN1-210ENST00000529640 IARSP41252 1262 aaKnown RBP22.7■■□□□ 1.22
UBXN1-210ENST00000529640 OLFM4Q6UX06 510 aa22.7■■□□□ 1.22
UBXN1-210ENST00000529640 TRPM7Q96QT4 1865 aa22.69■■□□□ 1.22
UBXN1-210ENST00000529640 SNED1Q8TER0 1413 aa22.69■■□□□ 1.22
UBXN1-210ENST00000529640 BTBD11A6QL63 1104 aa22.69■■□□□ 1.22
UBXN1-210ENST00000529640 RGL2O15211 777 aa22.69■■□□□ 1.22
UBXN1-210ENST00000529640 PIP4K2AP48426 406 aaPredicted RBP22.69■■□□□ 1.22
UBXN1-210ENST00000529640 FAM161AQ3B820 660 aa22.69■■□□□ 1.22
UBXN1-210ENST00000529640 TPTE2Q6XPS3 522 aa22.69■■□□□ 1.22
UBXN1-210ENST00000529640 GPC2Q8N158 579 aa22.69■■□□□ 1.22
UBXN1-210ENST00000529640 USP16Q9Y5T5 823 aa22.69■■□□□ 1.22
UBXN1-210ENST00000529640 U2SURPO15042 1029 aaKnown RBP22.68■■□□□ 1.22
UBXN1-210ENST00000529640 ABT1Q9ULW3 272 aaKnown RBP22.68■■□□□ 1.22
UBXN1-210ENST00000529640 LTBP1Q14766 1721 aa22.68■■□□□ 1.22
UBXN1-210ENST00000529640 PER1O15534 1290 aaPredicted RBP22.67■■□□□ 1.22
UBXN1-210ENST00000529640 SYNE4Q8N205 404 aa22.67■■□□□ 1.22
UBXN1-210ENST00000529640 KIF7Q2M1P5 1343 aa22.66■■□□□ 1.22
UBXN1-210ENST00000529640 ALDH1B1P30837 517 aa22.66■■□□□ 1.22
UBXN1-210ENST00000529640 CC2D1BQ5T0F9 858 aaKnown RBP22.66■■□□□ 1.22
UBXN1-210ENST00000529640 NIP7Q9Y221 180 aaKnown RBP eCLIP22.66■■□□□ 1.22
UBXN1-210ENST00000529640 PRAMEF22A3QJZ6 481 aa22.65■■□□□ 1.22
UBXN1-210ENST00000529640 PSMD1Q99460 953 aa22.65■■□□□ 1.22
UBXN1-210ENST00000529640 DDX21Q9NR30 783 aaKnown RBP eCLIP22.65■■□□□ 1.22
UBXN1-210ENST00000529640 COL4A5P29400 1685 aa22.65■■□□□ 1.22
UBXN1-210ENST00000529640 SNRPA1P09661 255 aaKnown RBP22.64■■□□□ 1.21
UBXN1-210ENST00000529640 JDP2Q8WYK2 163 aa22.64■■□□□ 1.21
UBXN1-210ENST00000529640 PCGF6Q9BYE7 350 aa22.64■■□□□ 1.21
UBXN1-210ENST00000529640 LAMB4A4D0S4 1761 aa22.63■■□□□ 1.21
UBXN1-210ENST00000529640 CAPNS2Q96L46 248 aa22.62■■□□□ 1.21
UBXN1-210ENST00000529640 NPC1L1Q9UHC9 1359 aa22.62■■□□□ 1.21
UBXN1-210ENST00000529640 NBPF26B4DH59 902 aa22.61■■□□□ 1.21
UBXN1-210ENST00000529640 LMOD1P29536 600 aaPredicted RBP22.61■■□□□ 1.21
UBXN1-210ENST00000529640 ECE1P42892 770 aa22.61■■□□□ 1.21
UBXN1-210ENST00000529640 EIF6P56537 245 aaKnown RBP22.61■■□□□ 1.21
UBXN1-210ENST00000529640 CRY2Q49AN0 593 aa22.61■■□□□ 1.21
UBXN1-210ENST00000529640 NBPF10Q6P3W6 841 aaKnown RBP22.61■■□□□ 1.21
UBXN1-210ENST00000529640 NBPF15Q8N660 670 aa22.61■■□□□ 1.21
UBXN1-210ENST00000529640 PHACTR3Q96KR7 559 aa22.61■■□□□ 1.21
UBXN1-210ENST00000529640 NUP98P52948 1817 aa22.61■■□□□ 1.21
UBXN1-210ENST00000529640 FAM177BA6PVY3 158 aa22.6■■□□□ 1.21
UBXN1-210ENST00000529640 CC2D2BQ6DHV5 1058 aa22.6■■□□□ 1.21
UBXN1-210ENST00000529640 BEGAINQ9BUH8 593 aa22.6■■□□□ 1.21
UBXN1-210ENST00000529640 PRKAR2BP31323 418 aa22.59■■□□□ 1.21
UBXN1-210ENST00000529640 RGS19P49795 217 aa22.59■■□□□ 1.21
UBXN1-210ENST00000529640 RSPH6AQ9H0K4 717 aa22.59■■□□□ 1.21
UBXN1-210ENST00000529640 GJA3Q9Y6H8 435 aa22.59■■□□□ 1.21
UBXN1-210ENST00000529640 ABCC12Q96J65 1359 aa22.59■■□□□ 1.21
UBXN1-210ENST00000529640 GTF2E1P29083 439 aaPredicted RBP22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms