RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 CASZ1Q86V15 1759 aa9.75□□□□□ -0.85
ITGB1-218ENST00000528877 BTAF1O14981 1849 aa9.75□□□□□ -0.85
ITGB1-218ENST00000528877 PTPN5P54829 565 aa9.75□□□□□ -0.85
ITGB1-218ENST00000528877 GPIHBP1Q8IV16 184 aa9.75□□□□□ -0.85
ITGB1-218ENST00000528877 DOT1LQ8TEK3 1739 aa9.75□□□□□ -0.85
ITGB1-218ENST00000528877 GNPATO15228 680 aa9.74□□□□□ -0.85
ITGB1-218ENST00000528877 FBLN1P23142 703 aa9.73□□□□□ -0.85
ITGB1-218ENST00000528877 PTF1AQ7RTS3 328 aa9.73□□□□□ -0.85
ITGB1-218ENST00000528877 TSR3Q9UJK0 312 aaKnown RBP9.73□□□□□ -0.85
ITGB1-218ENST00000528877 WASHC2AQ641Q2 1341 aa9.73□□□□□ -0.85
ITGB1-218ENST00000528877 SMAPO00193 183 aa9.72□□□□□ -0.85
ITGB1-218ENST00000528877 OATP04181 439 aa9.72□□□□□ -0.85
ITGB1-218ENST00000528877 BCAMP50895 628 aa9.72□□□□□ -0.85
ITGB1-218ENST00000528877 R3HDM1Q15032 1099 aaKnown RBP9.72□□□□□ -0.85
ITGB1-218ENST00000528877 HSP90AB2PQ58FF8 381 aa9.72□□□□□ -0.85
ITGB1-218ENST00000528877 NBPF6Q5VWK0 638 aa9.72□□□□□ -0.85
ITGB1-218ENST00000528877 NBPF4Q96M43 638 aa9.72□□□□□ -0.85
ITGB1-218ENST00000528877 EMILIN1Q9Y6C2 1016 aa9.72□□□□□ -0.85
ITGB1-218ENST00000528877 KIF7Q2M1P5 1343 aa9.72□□□□□ -0.85
ITGB1-218ENST00000528877 LY75O60449 1722 aa9.71□□□□□ -0.85
ITGB1-218ENST00000528877 QSER1Q2KHR3 1735 aa9.71□□□□□ -0.85
ITGB1-218ENST00000528877 TOGARAM1Q9Y4F4 1720 aa9.71□□□□□ -0.85
ITGB1-218ENST00000528877 NBPF14Q5TI25 921 aa9.71□□□□□ -0.86
ITGB1-218ENST00000528877 LTV1Q96GA3 475 aaPredicted RBP9.71□□□□□ -0.86
ITGB1-218ENST00000528877 EYA1Q99502 592 aa9.71□□□□□ -0.86
ITGB1-218ENST00000528877 ADGRG1Q9Y653 693 aa9.71□□□□□ -0.86
ITGB1-218ENST00000528877 MAP2P11137 1827 aaKnown RBP9.7□□□□□ -0.86
ITGB1-218ENST00000528877 KCNQ2O43526 872 aa9.7□□□□□ -0.86
ITGB1-218ENST00000528877 DNAJB2P25686 324 aa9.7□□□□□ -0.86
ITGB1-218ENST00000528877 SAMD7Q7Z3H4 446 aa9.7□□□□□ -0.86
ITGB1-218ENST00000528877 SLF2Q8IX21 1173 aa9.7□□□□□ -0.86
ITGB1-218ENST00000528877 PANK3Q9H999 370 aa9.7□□□□□ -0.86
ITGB1-218ENST00000528877 POLKQ9UBT6 870 aa9.7□□□□□ -0.86
ITGB1-218ENST00000528877 PCDH11XQ9BZA7 1347 aa9.7□□□□□ -0.86
ITGB1-218ENST00000528877 PCDH11YQ9BZA8 1340 aa9.7□□□□□ -0.86
ITGB1-218ENST00000528877 GPR37O15354 613 aa9.69□□□□□ -0.86
ITGB1-218ENST00000528877 TXNRD1Q16881 649 aa9.69□□□□□ -0.86
ITGB1-218ENST00000528877 ZCRB1Q8TBF4 217 aaKnown RBP9.69□□□□□ -0.86
ITGB1-218ENST00000528877 RAPGEF4Q8WZA2 1011 aa9.69□□□□□ -0.86
ITGB1-218ENST00000528877 NPC1L1Q9UHC9 1359 aa9.69□□□□□ -0.86
ITGB1-218ENST00000528877 HPS5Q9UPZ3 1129 aa9.69□□□□□ -0.86
ITGB1-218ENST00000528877 IGSF1Q8N6C5 1336 aa9.68□□□□□ -0.86
ITGB1-218ENST00000528877 PPP4CP60510 307 aa9.68□□□□□ -0.86
ITGB1-218ENST00000528877 USHBP1Q8N6Y0 703 aa9.68□□□□□ -0.86
ITGB1-218ENST00000528877 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.67□□□□□ -0.86
ITGB1-218ENST00000528877 C3orf80F5H4A9 247 aa9.67□□□□□ -0.86
ITGB1-218ENST00000528877 TATP17735 454 aaPredicted RBP9.67□□□□□ -0.86
ITGB1-218ENST00000528877 SLC27A3Q5K4L6 730 aa9.67□□□□□ -0.86
ITGB1-218ENST00000528877 IFFO2Q5TF58 517 aa9.67□□□□□ -0.86
ITGB1-218ENST00000528877 ACSBG1Q96GR2 724 aa9.67□□□□□ -0.86
ITGB1-218ENST00000528877 COL24A1Q17RW2 1714 aa9.67□□□□□ -0.86
ITGB1-218ENST00000528877 KDRP35968 1356 aa9.66□□□□□ -0.86
ITGB1-218ENST00000528877 EIF4A2Q14240 407 aaKnown RBP9.66□□□□□ -0.86
ITGB1-218ENST00000528877 DDX54Q8TDD1 881 aaKnown RBP9.66□□□□□ -0.86
ITGB1-218ENST00000528877 POLR3GLQ9BT43 218 aa9.66□□□□□ -0.86
ITGB1-218ENST00000528877 WBP1LQ9NX94 342 aa9.66□□□□□ -0.86
ITGB1-218ENST00000528877 KNSTRNQ9Y448 316 aa9.66□□□□□ -0.86
ITGB1-218ENST00000528877 CYP27B1O15528 508 aa9.65□□□□□ -0.86
ITGB1-218ENST00000528877 SLC15A2Q16348 729 aa9.65□□□□□ -0.86
ITGB1-218ENST00000528877 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.65□□□□□ -0.86
ITGB1-218ENST00000528877 PRR14Q9BWN1 585 aa9.65□□□□□ -0.86
ITGB1-218ENST00000528877 STK32BQ9NY57 414 aa9.65□□□□□ -0.86
ITGB1-218ENST00000528877 TUBGCP6Q96RT7 1819 aa9.65□□□□□ -0.86
ITGB1-218ENST00000528877 C5P01031 1676 aa9.64□□□□□ -0.87
ITGB1-218ENST00000528877 ZNF831Q5JPB2 1677 aa9.64□□□□□ -0.87
ITGB1-218ENST00000528877 PPM1GO15355 546 aaPredicted RBP9.64□□□□□ -0.87
ITGB1-218ENST00000528877 PER1O15534 1290 aaPredicted RBP9.64□□□□□ -0.87
ITGB1-218ENST00000528877 SWT1Q5T5J6 900 aaKnown RBP9.64□□□□□ -0.87
ITGB1-218ENST00000528877 PXYLP1Q8TE99 480 aa9.64□□□□□ -0.87
ITGB1-218ENST00000528877 TMEM134Q9H6X4 195 aa9.64□□□□□ -0.87
ITGB1-218ENST00000528877 LRRC4BQ9NT99 713 aa9.64□□□□□ -0.87
ITGB1-218ENST00000528877 COL3A1P02461 1466 aaPredicted RBP9.64□□□□□ -0.87
ITGB1-218ENST00000528877 ITGB4P16144 1822 aa9.63□□□□□ -0.87
ITGB1-218ENST00000528877 RCCD1A6NED2 376 aa9.63□□□□□ -0.87
ITGB1-218ENST00000528877 RNF40O75150 1001 aa9.63□□□□□ -0.87
ITGB1-218ENST00000528877 ZNF827Q17R98 1081 aa9.63□□□□□ -0.87
ITGB1-218ENST00000528877 METTL3Q86U44 580 aaKnown RBP9.63□□□□□ -0.87
ITGB1-218ENST00000528877 MORC1Q86VD1 984 aa9.63□□□□□ -0.87
ITGB1-218ENST00000528877 SPON1Q9HCB6 807 aa9.63□□□□□ -0.87
ITGB1-218ENST00000528877 SPG7Q9UQ90 795 aa9.63□□□□□ -0.87
ITGB1-218ENST00000528877 CICQ96RK0 1608 aaPredicted RBP9.63□□□□□ -0.87
ITGB1-218ENST00000528877 TAF1LQ8IZX4 1826 aa9.62□□□□□ -0.87
ITGB1-218ENST00000528877 TNNT2P45379 298 aaPredicted RBP9.62□□□□□ -0.87
ITGB1-218ENST00000528877 PALLDQ8WX93 1383 aa9.62□□□□□ -0.87
ITGB1-218ENST00000528877 MAP3K5Q99683 1374 aa9.62□□□□□ -0.87
ITGB1-218ENST00000528877 ADAMTS7Q9UKP4 1686 aa9.61□□□□□ -0.87
ITGB1-218ENST00000528877 MRC1P22897 1456 aa9.61□□□□□ -0.87
ITGB1-218ENST00000528877 PHKG2P15735 406 aa9.61□□□□□ -0.87
ITGB1-218ENST00000528877 HMGB2P26583 209 aaKnown RBP9.61□□□□□ -0.87
ITGB1-218ENST00000528877 MAP2K5Q13163 448 aa9.61□□□□□ -0.87
ITGB1-218ENST00000528877 SYTL4Q96C24 671 aaPredicted RBP9.61□□□□□ -0.87
ITGB1-218ENST00000528877 MTFR1LQ9H019 292 aa9.61□□□□□ -0.87
ITGB1-218ENST00000528877 C4BP0C0L5 1744 aa9.6□□□□□ -0.87
ITGB1-218ENST00000528877 KDM6AO15550 1401 aaPredicted RBP9.6□□□□□ -0.87
ITGB1-218ENST00000528877 ITGBL1O95965 494 aaPredicted RBP9.6□□□□□ -0.87
ITGB1-218ENST00000528877 IL13P35225 146 aa9.6□□□□□ -0.87
ITGB1-218ENST00000528877 PDGFDQ9GZP0 370 aaPredicted RBP9.6□□□□□ -0.87
ITGB1-218ENST00000528877 PNPLA7Q6ZV29 1317 aa9.59□□□□□ -0.87
ITGB1-218ENST00000528877 AMOTQ4VCS5 1084 aa9.59□□□□□ -0.87
ITGB1-218ENST00000528877 IFNL2Q8IZJ0 200 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms