RNA–Protein interactions for RNA: ENST00000528482.6

AP004608.1-203, humanhuman

TSL 5 BASIC

Gene AP004608.1, Length 3,679 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-203ENST00000528482 ME3Q16798 604 aa17.69■□□□□ 0.42
AP004608.1-203ENST00000528482 VPS53Q5VIR6 699 aa17.69■□□□□ 0.42
AP004608.1-203ENST00000528482 LARP1BQ659C4 914 aaKnown RBP17.69■□□□□ 0.42
AP004608.1-203ENST00000528482 CGNQ9P2M7 1197 aaKnown RBP17.69■□□□□ 0.42
AP004608.1-203ENST00000528482 MAP3K19Q56UN5 1328 aa17.69■□□□□ 0.42
AP004608.1-203ENST00000528482 PTH1RQ03431 593 aa17.69■□□□□ 0.42
AP004608.1-203ENST00000528482 TPD52L1Q16890 204 aaPredicted RBP17.69■□□□□ 0.42
AP004608.1-203ENST00000528482 ZNF592Q92610 1267 aa17.69■□□□□ 0.42
AP004608.1-203ENST00000528482 SH2B1Q9NRF2 756 aaPredicted RBP17.69■□□□□ 0.42
AP004608.1-203ENST00000528482 CYP46A1Q9Y6A2 500 aa17.69■□□□□ 0.42
AP004608.1-203ENST00000528482 RAB11FIP3O75154 756 aa17.69■□□□□ 0.42
AP004608.1-203ENST00000528482 ZNF75DP51815 510 aa17.69■□□□□ 0.42
AP004608.1-203ENST00000528482 ZSCAN31Q96LW9 406 aaPredicted RBP17.69■□□□□ 0.42
AP004608.1-203ENST00000528482 DDX41Q9UJV9 622 aaKnown RBP17.69■□□□□ 0.42
AP004608.1-203ENST00000528482 CDC37L1Q7L3B6 337 aa17.68■□□□□ 0.42
AP004608.1-203ENST00000528482 GOLGA6L4A6NEF3 574 aa17.68■□□□□ 0.42
AP004608.1-203ENST00000528482 PAXBP1Q9Y5B6 917 aa17.68■□□□□ 0.42
AP004608.1-203ENST00000528482 SRGAP3O43295 1099 aa17.67■□□□□ 0.42
AP004608.1-203ENST00000528482 PLA2G4DQ86XP0 818 aa17.67■□□□□ 0.42
AP004608.1-203ENST00000528482 CACTINQ8WUQ7 758 aaKnown RBP17.67■□□□□ 0.42
AP004608.1-203ENST00000528482 KIF1BPQ96EK5 621 aa17.67■□□□□ 0.42
AP004608.1-203ENST00000528482 MON2Q7Z3U7 1717 aa17.67■□□□□ 0.42
AP004608.1-203ENST00000528482 GABPB1Q06547 395 aaPredicted RBP17.67■□□□□ 0.42
AP004608.1-203ENST00000528482 TFIP11Q9UBB9 837 aaKnown RBP17.67■□□□□ 0.42
AP004608.1-203ENST00000528482 ZSWIM6Q9HCJ5 1215 aa17.66■□□□□ 0.42
AP004608.1-203ENST00000528482 CLIP2Q9UDT6 1046 aa17.66■□□□□ 0.42
AP004608.1-203ENST00000528482 C3P01024 1663 aa17.66■□□□□ 0.42
AP004608.1-203ENST00000528482 TPCN1Q9ULQ1 816 aa17.66■□□□□ 0.42
AP004608.1-203ENST00000528482 RIMBP3CA6NJZ7 1639 aa17.65■□□□□ 0.42
AP004608.1-203ENST00000528482 RIMBP3BA6NNM3 1639 aa17.65■□□□□ 0.42
AP004608.1-203ENST00000528482 RIMBP3Q9UFD9 1639 aa17.65■□□□□ 0.42
AP004608.1-203ENST00000528482 TAF3Q5VWG9 929 aa17.65■□□□□ 0.42
AP004608.1-203ENST00000528482 KIF18AQ8NI77 898 aa17.65■□□□□ 0.42
AP004608.1-203ENST00000528482 ELP1O95163 1332 aa17.65■□□□□ 0.42
AP004608.1-203ENST00000528482 TTC21BQ7Z4L5 1316 aa17.65■□□□□ 0.42
AP004608.1-203ENST00000528482 ZNF165P49910 485 aa17.65■□□□□ 0.42
AP004608.1-203ENST00000528482 CCDC144BQ3MJ40 725 aa17.65■□□□□ 0.42
AP004608.1-203ENST00000528482 CCDC144CPQ8IYA2 1237 aa17.65■□□□□ 0.42
AP004608.1-203ENST00000528482 DNAJC25Q9H1X3 360 aa17.65■□□□□ 0.42
AP004608.1-203ENST00000528482 XRN1Q8IZH2 1706 aaKnown RBP17.65■□□□□ 0.42
AP004608.1-203ENST00000528482 PRR36Q9H6K5 1346 aa17.65■□□□□ 0.42
AP004608.1-203ENST00000528482 SLFN14P0C7P3 912 aa17.65■□□□□ 0.42
AP004608.1-203ENST00000528482 FGD1P98174 961 aa17.65■□□□□ 0.42
AP004608.1-203ENST00000528482 CEP135Q66GS9 1140 aa17.65■□□□□ 0.42
AP004608.1-203ENST00000528482 POLA2Q14181 598 aa17.64■□□□□ 0.41
AP004608.1-203ENST00000528482 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.64■□□□□ 0.41
AP004608.1-203ENST00000528482 RUFY2Q8WXA3 655 aa17.64■□□□□ 0.41
AP004608.1-203ENST00000528482 SPATA32Q96LK8 384 aa17.64■□□□□ 0.41
AP004608.1-203ENST00000528482 MORC2Q9Y6X9 1032 aaPredicted RBP17.64■□□□□ 0.41
AP004608.1-203ENST00000528482 TDRD7Q8NHU6 1098 aaKnown RBP17.64■□□□□ 0.41
AP004608.1-203ENST00000528482 BBXQ8WY36 941 aaPredicted RBP17.63■□□□□ 0.41
AP004608.1-203ENST00000528482 RIMS1Q86UR5 1692 aaKnown RBP17.63■□□□□ 0.41
AP004608.1-203ENST00000528482 NUTM2FA1L443 756 aa17.63■□□□□ 0.41
AP004608.1-203ENST00000528482 TM6SF1Q9BZW5 370 aa17.63■□□□□ 0.41
AP004608.1-203ENST00000528482 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.63■□□□□ 0.41
AP004608.1-203ENST00000528482 V9GYY5 206 aaPredicted RBP17.63■□□□□ 0.41
AP004608.1-203ENST00000528482 PHAXQ9H814 394 aaKnown RBP17.63■□□□□ 0.41
AP004608.1-203ENST00000528482 DDX19AQ9NUU7 478 aaKnown RBP17.63■□□□□ 0.41
AP004608.1-203ENST00000528482 TTC21AQ8NDW8 1320 aa17.63■□□□□ 0.41
AP004608.1-203ENST00000528482 METP08581 1390 aa17.63■□□□□ 0.41
AP004608.1-203ENST00000528482 SCAND2PQ9GZW5 306 aaPredicted RBP17.62■□□□□ 0.41
AP004608.1-203ENST00000528482 NR1I2O75469 434 aa17.62■□□□□ 0.41
AP004608.1-203ENST00000528482 GLRX3O76003 335 aaKnown RBP17.62■□□□□ 0.41
AP004608.1-203ENST00000528482 ZKSCAN1P17029 563 aaPredicted RBP17.62■□□□□ 0.41
AP004608.1-203ENST00000528482 KCNJ4P48050 445 aa17.62■□□□□ 0.41
AP004608.1-203ENST00000528482 OS9Q13438 667 aaPredicted RBP17.62■□□□□ 0.41
AP004608.1-203ENST00000528482 COL9A3Q14050 684 aaPredicted RBP17.62■□□□□ 0.41
AP004608.1-203ENST00000528482 CLSTN2Q9H4D0 955 aa17.62■□□□□ 0.41
AP004608.1-203ENST00000528482 NPHP3Q7Z494 1330 aa17.62■□□□□ 0.41
AP004608.1-203ENST00000528482 USP27XA6NNY8 438 aa17.61■□□□□ 0.41
AP004608.1-203ENST00000528482 NBPF7P0C2Y1 421 aaPredicted RBP17.61■□□□□ 0.41
AP004608.1-203ENST00000528482 BICD2Q8TD16 824 aa17.61■□□□□ 0.41
AP004608.1-203ENST00000528482 TCEANC2Q96MN5 208 aa17.61■□□□□ 0.41
AP004608.1-203ENST00000528482 PEAK1Q9H792 1746 aa17.61■□□□□ 0.41
AP004608.1-203ENST00000528482 PDCP20941 246 aa17.61■□□□□ 0.41
AP004608.1-203ENST00000528482 ARID5BQ14865 1188 aa17.61■□□□□ 0.41
AP004608.1-203ENST00000528482 LEO1Q8WVC0 666 aaPredicted RBP17.61■□□□□ 0.41
AP004608.1-203ENST00000528482 ZNF215Q9UL58 517 aaPredicted RBP17.61■□□□□ 0.41
AP004608.1-203ENST00000528482 PPP6R1Q9UPN7 881 aa17.61■□□□□ 0.41
AP004608.1-203ENST00000528482 KMT5BQ4FZB7 885 aa17.61■□□□□ 0.41
AP004608.1-203ENST00000528482 ITSN1Q15811 1721 aa17.6■□□□□ 0.41
AP004608.1-203ENST00000528482 MAP3K5Q99683 1374 aa17.6■□□□□ 0.41
AP004608.1-203ENST00000528482 NECTIN1Q15223 517 aa17.6■□□□□ 0.41
AP004608.1-203ENST00000528482 RBM43Q6ZSC3 357 aaKnown RBP17.6■□□□□ 0.41
AP004608.1-203ENST00000528482 KRT222Q8N1A0 295 aa17.6■□□□□ 0.41
AP004608.1-203ENST00000528482 TERF2Q15554 542 aa17.6■□□□□ 0.41
AP004608.1-203ENST00000528482 RBM8AQ9Y5S9 174 aaKnown RBP17.6■□□□□ 0.41
AP004608.1-203ENST00000528482 AKAP12Q02952 1782 aa17.6■□□□□ 0.41
AP004608.1-203ENST00000528482 CCDC171Q6TFL3 1326 aa17.6■□□□□ 0.41
AP004608.1-203ENST00000528482 LARP1Q6PKG0 1096 aaKnown RBP17.6■□□□□ 0.41
AP004608.1-203ENST00000528482 RGPD1P0DJD0 1748 aa17.6■□□□□ 0.41
AP004608.1-203ENST00000528482 FAM208AQ9UK61 1670 aaKnown RBP17.6■□□□□ 0.41
AP004608.1-203ENST00000528482 ACEP12821 1306 aa17.59■□□□□ 0.41
AP004608.1-203ENST00000528482 CREB3L3Q68CJ9 461 aa17.59■□□□□ 0.41
AP004608.1-203ENST00000528482 LRRC8AQ8IWT6 810 aa17.59■□□□□ 0.41
AP004608.1-203ENST00000528482 ZNF397Q8NF99 534 aaPredicted RBP17.59■□□□□ 0.41
AP004608.1-203ENST00000528482 OVOS2A0A0J9YW53 1432 aa17.59■□□□□ 0.41
AP004608.1-203ENST00000528482 OVOS2Q6IE36 1432 aa17.59■□□□□ 0.41
AP004608.1-203ENST00000528482 HDGFL1Q5TGJ6 251 aa17.59■□□□□ 0.41
AP004608.1-203ENST00000528482 TTC41PQ6P2S7 1318 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms