RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 HTATSF1O43719 755 aaKnown RBP20.99■□□□□ 0.95
CTTN-212ENST00000527962 PRPF40BQ6NWY9 871 aaKnown RBP20.99■□□□□ 0.95
CTTN-212ENST00000527962 TPTE2Q6XPS3 522 aa20.99■□□□□ 0.95
CTTN-212ENST00000527962 USP16Q9Y5T5 823 aa20.99■□□□□ 0.95
CTTN-212ENST00000527962 DLEC1Q9Y238 1755 aa20.99■□□□□ 0.95
CTTN-212ENST00000527962 KCNQ3O43525 872 aa20.98■□□□□ 0.95
CTTN-212ENST00000527962 NEFMP07197 916 aa20.98■□□□□ 0.95
CTTN-212ENST00000527962 VIRMAQ69YN4 1812 aaKnown RBP20.97■□□□□ 0.95
CTTN-212ENST00000527962 IQCA1LA6NCM1 817 aa20.97■□□□□ 0.95
CTTN-212ENST00000527962 NPR1P16066 1061 aa20.96■□□□□ 0.95
CTTN-212ENST00000527962 MCM10Q7L590 875 aa20.96■□□□□ 0.95
CTTN-212ENST00000527962 POTECB2RU33 542 aa20.95■□□□□ 0.94
CTTN-212ENST00000527962 CCDC93Q567U6 631 aa20.95■□□□□ 0.94
CTTN-212ENST00000527962 CHADLQ6NUI6 762 aa20.95■□□□□ 0.94
CTTN-212ENST00000527962 SCN7AQ01118 1682 aa20.95■□□□□ 0.94
CTTN-212ENST00000527962 GTF2E1P29083 439 aaPredicted RBP20.94■□□□□ 0.94
CTTN-212ENST00000527962 PPP2R1AP30153 589 aa20.94■□□□□ 0.94
CTTN-212ENST00000527962 COL13A1Q5TAT6 717 aaPredicted RBP20.94■□□□□ 0.94
CTTN-212ENST00000527962 NIP7Q9Y221 180 aaKnown RBP eCLIP20.94■□□□□ 0.94
CTTN-212ENST00000527962 PIP4K2AP48426 406 aaPredicted RBP20.93■□□□□ 0.94
CTTN-212ENST00000527962 TAF7Q15545 349 aaPredicted RBP20.93■□□□□ 0.94
CTTN-212ENST00000527962 DDNO94850 711 aaPredicted RBP20.92■□□□□ 0.94
CTTN-212ENST00000527962 ALDH1B1P30837 517 aa20.92■□□□□ 0.94
CTTN-212ENST00000527962 RTKN2Q8IZC4 609 aa20.92■□□□□ 0.94
CTTN-212ENST00000527962 TNS4Q8IZW8 715 aa20.92■□□□□ 0.94
CTTN-212ENST00000527962 PRAMEF22A3QJZ6 481 aa20.91■□□□□ 0.94
CTTN-212ENST00000527962 SIPA1L3O60292 1781 aaPredicted RBP20.91■□□□□ 0.94
CTTN-212ENST00000527962 TIAM2Q8IVF5 1701 aa20.91■□□□□ 0.94
CTTN-212ENST00000527962 PNISRQ8TF01 805 aaKnown RBP20.91■□□□□ 0.94
CTTN-212ENST00000527962 CREBZFQ9NS37 354 aa20.91■□□□□ 0.94
CTTN-212ENST00000527962 KLRG2A4D1S0 409 aaPredicted RBP20.9■□□□□ 0.94
CTTN-212ENST00000527962 HSPA1AP0DMV8 641 aaKnown RBP20.89■□□□□ 0.93
CTTN-212ENST00000527962 HSPA1BP0DMV9 641 aaKnown RBP20.89■□□□□ 0.93
CTTN-212ENST00000527962 FKBP4Q02790 459 aaKnown RBP eCLIP20.89■□□□□ 0.93
CTTN-212ENST00000527962 C7orf43Q8WVR3 580 aa20.89■□□□□ 0.93
CTTN-212ENST00000527962 ANKRD31Q8N7Z5 1873 aa20.89■□□□□ 0.93
CTTN-212ENST00000527962 NBPF26B4DH59 902 aa20.88■□□□□ 0.93
CTTN-212ENST00000527962 DCTN1Q14203 1278 aa20.88■□□□□ 0.93
CTTN-212ENST00000527962 NBPF10Q6P3W6 841 aaKnown RBP20.88■□□□□ 0.93
CTTN-212ENST00000527962 LDHDQ86WU2 507 aa20.88■□□□□ 0.93
CTTN-212ENST00000527962 NBPF15Q8N660 670 aa20.88■□□□□ 0.93
CTTN-212ENST00000527962 L3MBTL3Q96JM7 780 aaPredicted RBP20.88■□□□□ 0.93
CTTN-212ENST00000527962 NYXQ9GZU5 481 aa20.88■□□□□ 0.93
CTTN-212ENST00000527962 FAM177BA6PVY3 158 aa20.87■□□□□ 0.93
CTTN-212ENST00000527962 FER1L6Q2WGJ9 1857 aa20.86■□□□□ 0.93
CTTN-212ENST00000527962 PNNQ9H307 717 aaKnown RBP20.86■□□□□ 0.93
CTTN-212ENST00000527962 COL11A2P13942 1736 aaPredicted RBP20.85■□□□□ 0.93
CTTN-212ENST00000527962 ERVV-1B6SEH8 477 aa20.85■□□□□ 0.93
CTTN-212ENST00000527962 KIF6Q6ZMV9 814 aa20.85■□□□□ 0.93
CTTN-212ENST00000527962 TAF1DQ9H5J8 278 aaPredicted RBP20.85■□□□□ 0.93
CTTN-212ENST00000527962 ZNF277Q9NRM2 450 aaPredicted RBP20.85■□□□□ 0.93
CTTN-212ENST00000527962 CCDC88AQ3V6T2 1871 aa20.85■□□□□ 0.93
CTTN-212ENST00000527962 PCNTO95613 3336 aa20.84■□□□□ 0.93
CTTN-212ENST00000527962 GRIPAP1Q4V328 841 aa20.84■□□□□ 0.93
CTTN-212ENST00000527962 CC2D2BQ6DHV5 1058 aa20.84■□□□□ 0.93
CTTN-212ENST00000527962 PNMA8AQ86V59 439 aaPredicted RBP20.84■□□□□ 0.93
CTTN-212ENST00000527962 JDP2Q8WYK2 163 aa20.84■□□□□ 0.93
CTTN-212ENST00000527962 HACL1Q9UJ83 578 aa20.84■□□□□ 0.93
CTTN-212ENST00000527962 CAPN15O75808 1086 aa20.83■□□□□ 0.93
CTTN-212ENST00000527962 HLFQ16534 295 aa20.83■□□□□ 0.93
CTTN-212ENST00000527962 EAPPQ56P03 285 aaPredicted RBP20.83■□□□□ 0.93
CTTN-212ENST00000527962 NGEFQ8N5V2 710 aa20.83■□□□□ 0.93
CTTN-212ENST00000527962 MIS18AQ9NYP9 233 aa20.83■□□□□ 0.93
CTTN-212ENST00000527962 MKRN1Q9UHC7 482 aaKnown RBP20.83■□□□□ 0.93
CTTN-212ENST00000527962 CLEC11AQ9Y240 323 aa20.83■□□□□ 0.93
CTTN-212ENST00000527962 SLX4Q8IY92 1834 aa20.83■□□□□ 0.92
CTTN-212ENST00000527962 BCORQ6W2J9 1755 aa20.82■□□□□ 0.92
CTTN-212ENST00000527962 POTEIP0CG38 1075 aa20.82■□□□□ 0.92
CTTN-212ENST00000527962 POTEJP0CG39 1038 aa20.82■□□□□ 0.92
CTTN-212ENST00000527962 IARSP41252 1262 aaKnown RBP20.82■□□□□ 0.92
CTTN-212ENST00000527962 DICER1Q9UPY3 1922 aaKnown RBP20.82■□□□□ 0.92
CTTN-212ENST00000527962 SYNE4Q8N205 404 aa20.81■□□□□ 0.92
CTTN-212ENST00000527962 RPGRQ92834 1020 aaKnown RBP20.81■□□□□ 0.92
CTTN-212ENST00000527962 PSMD1Q99460 953 aa20.81■□□□□ 0.92
CTTN-212ENST00000527962 TMX4Q9H1E5 349 aaPredicted RBP20.81■□□□□ 0.92
CTTN-212ENST00000527962 RRP7AQ9Y3A4 280 aaKnown RBP20.81■□□□□ 0.92
CTTN-212ENST00000527962 TMEM88BA6NKF7 163 aa20.8■□□□□ 0.92
CTTN-212ENST00000527962 EPHX2P34913 555 aa20.8■□□□□ 0.92
CTTN-212ENST00000527962 GPC2Q8N158 579 aa20.8■□□□□ 0.92
CTTN-212ENST00000527962 MAP3K15Q6ZN16 1313 aa20.79■□□□□ 0.92
CTTN-212ENST00000527962 MAPK8IP3Q9UPT6 1336 aa20.79■□□□□ 0.92
CTTN-212ENST00000527962 EIF6P56537 245 aaKnown RBP20.79■□□□□ 0.92
CTTN-212ENST00000527962 CRY2Q49AN0 593 aa20.79■□□□□ 0.92
CTTN-212ENST00000527962 PASKQ96RG2 1323 aa20.78■□□□□ 0.92
CTTN-212ENST00000527962 FZD9O00144 591 aa20.78■□□□□ 0.92
CTTN-212ENST00000527962 AIDAQ96BJ3 306 aa20.78■□□□□ 0.92
CTTN-212ENST00000527962 ZNF541Q9H0D2 1346 aa20.78■□□□□ 0.92
CTTN-212ENST00000527962 ARFGEF2Q9Y6D5 1785 aa20.77■□□□□ 0.92
CTTN-212ENST00000527962 CNTNAP1P78357 1384 aa20.77■□□□□ 0.92
CTTN-212ENST00000527962 MYL6BP14649 208 aa20.77■□□□□ 0.92
CTTN-212ENST00000527962 EIF4A1P60842 406 aaKnown RBP20.77■□□□□ 0.92
CTTN-212ENST00000527962 NFE2L2Q16236 605 aa20.77■□□□□ 0.92
CTTN-212ENST00000527962 OLFM4Q6UX06 510 aa20.77■□□□□ 0.92
CTTN-212ENST00000527962 NUTM1Q86Y26 1132 aa20.77■□□□□ 0.92
CTTN-212ENST00000527962 RBM17Q96I25 401 aaKnown RBP20.77■□□□□ 0.92
CTTN-212ENST00000527962 LMOD1P29536 600 aaPredicted RBP20.76■□□□□ 0.91
CTTN-212ENST00000527962 HOXA10P31260 410 aaPredicted RBP20.76■□□□□ 0.91
CTTN-212ENST00000527962 PPP1R42Q7Z4L9 355 aa20.76■□□□□ 0.91
CTTN-212ENST00000527962 ERBB4Q15303 1308 aa20.76■□□□□ 0.91
CTTN-212ENST00000527962 IBTKQ9P2D0 1353 aaPredicted RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms