RNA–Protein interactions for RNA: ENST00000527900.1

CHD7-206, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-206ENST00000527900 CCDC24Q8N4L8 307 aa11.29□□□□□ -0.6
CHD7-206ENST00000527900 RNF181Q9P0P0 153 aa11.29□□□□□ -0.6
CHD7-206ENST00000527900 SLX4Q8IY92 1834 aa11.28□□□□□ -0.6
CHD7-206ENST00000527900 KLRG2A4D1S0 409 aaPredicted RBP11.28□□□□□ -0.6
CHD7-206ENST00000527900 RASSF7Q02833 373 aa11.28□□□□□ -0.6
CHD7-206ENST00000527900 PNISRQ8TF01 805 aaKnown RBP11.28□□□□□ -0.6
CHD7-206ENST00000527900 DICER1Q9UPY3 1922 aaKnown RBP11.28□□□□□ -0.6
CHD7-206ENST00000527900 ZC3H4Q9UPT8 1303 aaKnown RBP11.28□□□□□ -0.6
CHD7-206ENST00000527900 ARFGEF2Q9Y6D5 1785 aa11.28□□□□□ -0.6
CHD7-206ENST00000527900 SRGNP10124 158 aa11.27□□□□□ -0.61
CHD7-206ENST00000527900 LMNB1P20700 586 aa11.27□□□□□ -0.61
CHD7-206ENST00000527900 CNBD1Q8NA66 436 aa11.27□□□□□ -0.61
CHD7-206ENST00000527900 THUMPD2Q9BTF0 503 aaKnown RBP11.27□□□□□ -0.61
CHD7-206ENST00000527900 PNNQ9H307 717 aaKnown RBP11.27□□□□□ -0.61
CHD7-206ENST00000527900 NUP98P52948 1817 aa11.27□□□□□ -0.61
CHD7-206ENST00000527900 HLFQ16534 295 aa11.26□□□□□ -0.61
CHD7-206ENST00000527900 STYK1Q6J9G0 422 aa11.26□□□□□ -0.61
CHD7-206ENST00000527900 NPM2Q86SE8 214 aaKnown RBP11.26□□□□□ -0.61
CHD7-206ENST00000527900 C7orf43Q8WVR3 580 aa11.26□□□□□ -0.61
CHD7-206ENST00000527900 ZNF622Q969S3 477 aaKnown RBP eCLIP11.26□□□□□ -0.614e-6■■■□□ 18.1
CHD7-206ENST00000527900 TNRC6CQ9HCJ0 1690 aaKnown RBP11.26□□□□□ -0.61
CHD7-206ENST00000527900 ERVV-1B6SEH8 477 aa11.25□□□□□ -0.61
CHD7-206ENST00000527900 C21orf2O43822 256 aa11.25□□□□□ -0.61
CHD7-206ENST00000527900 NEFMP07197 916 aa11.25□□□□□ -0.61
CHD7-206ENST00000527900 DDX10Q13206 875 aaKnown RBP11.25□□□□□ -0.61
CHD7-206ENST00000527900 LRP10Q7Z4F1 713 aa11.25□□□□□ -0.61
CHD7-206ENST00000527900 DNAJC5GQ8N7S2 189 aa11.25□□□□□ -0.61
CHD7-206ENST00000527900 RBM46Q8TBY0 533 aaKnown RBP11.25□□□□□ -0.61
CHD7-206ENST00000527900 MASTLQ96GX5 879 aa11.25□□□□□ -0.61
CHD7-206ENST00000527900 RRAGCQ9HB90 399 aa11.25□□□□□ -0.61
CHD7-206ENST00000527900 ZNF652Q9Y2D9 606 aa11.25□□□□□ -0.61
CHD7-206ENST00000527900 KDM2BQ8NHM5 1336 aa11.25□□□□□ -0.61
CHD7-206ENST00000527900 LTBP3Q9NS15 1303 aa11.25□□□□□ -0.61
CHD7-206ENST00000527900 CACNA1SQ13698 1873 aa11.25□□□□□ -0.61
CHD7-206ENST00000527900 GLTPD2A6NH11 291 aa11.24□□□□□ -0.61
CHD7-206ENST00000527900 POTECB2RU33 542 aa11.24□□□□□ -0.61
CHD7-206ENST00000527900 TMPOP42166 694 aaKnown RBP11.24□□□□□ -0.61
CHD7-206ENST00000527900 ST5P78524 1137 aa11.24□□□□□ -0.61
CHD7-206ENST00000527900 TPTE2Q6XPS3 522 aa11.24□□□□□ -0.61
CHD7-206ENST00000527900 NBPF5PQ86XG9 351 aaPredicted RBP11.24□□□□□ -0.61
CHD7-206ENST00000527900 CNKSR1Q969H4 720 aa11.24□□□□□ -0.61
CHD7-206ENST00000527900 BABAM1Q9NWV8 329 aa11.24□□□□□ -0.61
CHD7-206ENST00000527900 NIP7Q9Y221 180 aaKnown RBP eCLIP11.24□□□□□ -0.61
CHD7-206ENST00000527900 TIAM2Q8IVF5 1701 aa11.23□□□□□ -0.61
CHD7-206ENST00000527900 RIPK4P57078 832 aa11.23□□□□□ -0.61
CHD7-206ENST00000527900 PDIA6Q15084 440 aa11.23□□□□□ -0.61
CHD7-206ENST00000527900 PRPF40BQ6NWY9 871 aaKnown RBP11.23□□□□□ -0.61
CHD7-206ENST00000527900 TTLL7Q6ZT98 887 aa11.23□□□□□ -0.61
CHD7-206ENST00000527900 MAP3K15Q6ZN16 1313 aa11.23□□□□□ -0.61
CHD7-206ENST00000527900 MYBBP1AQ9BQG0 1328 aaKnown RBP11.23□□□□□ -0.61
CHD7-206ENST00000527900 MAPK8IP3Q9UPT6 1336 aa11.23□□□□□ -0.61
CHD7-206ENST00000527900 APLP1P51693 650 aa11.22□□□□□ -0.61
CHD7-206ENST00000527900 FSTL1Q12841 308 aa11.22□□□□□ -0.61
CHD7-206ENST00000527900 ERBB4Q15303 1308 aa11.22□□□□□ -0.61
CHD7-206ENST00000527900 WDR90Q96KV7 1748 aa11.22□□□□□ -0.61
CHD7-206ENST00000527900 RRP7AQ9Y3A4 280 aaKnown RBP11.22□□□□□ -0.61
CHD7-206ENST00000527900 SNED1Q8TER0 1413 aa11.21□□□□□ -0.61
CHD7-206ENST00000527900 NPR1P16066 1061 aa11.21□□□□□ -0.61
CHD7-206ENST00000527900 CRY2Q49AN0 593 aa11.21□□□□□ -0.61
CHD7-206ENST00000527900 ZNF34Q8IZ26 560 aa11.21□□□□□ -0.61
CHD7-206ENST00000527900 ZNF219Q9P2Y4 722 aaPredicted RBP11.21□□□□□ -0.61
CHD7-206ENST00000527900 TSPYL4Q9UJ04 414 aa11.21□□□□□ -0.61
CHD7-206ENST00000527900 TRIM35Q9UPQ4 493 aa11.21□□□□□ -0.61
CHD7-206ENST00000527900 UBN2Q6ZU65 1347 aa11.2□□□□□ -0.62
CHD7-206ENST00000527900 CHL1O00533 1208 aa11.2□□□□□ -0.62
CHD7-206ENST00000527900 VEGFAP15692 232 aaPredicted RBP11.2□□□□□ -0.62
CHD7-206ENST00000527900 SOGA3Q5TF21 947 aa11.2□□□□□ -0.62
CHD7-206ENST00000527900 GIGYF2Q6Y7W6 1299 aaKnown RBP11.2□□□□□ -0.62
CHD7-206ENST00000527900 NGEFQ8N5V2 710 aa11.2□□□□□ -0.62
CHD7-206ENST00000527900 RIC1Q4ADV7 1423 aa11.19□□□□□ -0.62
CHD7-206ENST00000527900 ABCC12Q96J65 1359 aa11.19□□□□□ -0.62
CHD7-206ENST00000527900 IBTKQ9P2D0 1353 aaPredicted RBP11.19□□□□□ -0.62
CHD7-206ENST00000527900 NPHP1O15259 732 aa11.19□□□□□ -0.62
CHD7-206ENST00000527900 MYL6BP14649 208 aa11.19□□□□□ -0.62
CHD7-206ENST00000527900 ERFEQ4G0M1 354 aa11.19□□□□□ -0.62
CHD7-206ENST00000527900 SUSD4Q5VX71 490 aa11.19□□□□□ -0.62
CHD7-206ENST00000527900 C16orf71Q8IYS4 520 aaPredicted RBP11.19□□□□□ -0.62
CHD7-206ENST00000527900 TAOK3Q9H2K8 898 aa11.19□□□□□ -0.62
CHD7-206ENST00000527900 PRKRIP1Q9H875 184 aaPredicted RBP11.19□□□□□ -0.62
CHD7-206ENST00000527900 ADAMTS8Q9UP79 889 aa11.19□□□□□ -0.62
CHD7-206ENST00000527900 FAM177BA6PVY3 158 aa11.18□□□□□ -0.62
CHD7-206ENST00000527900 HOXA10P31260 410 aaPredicted RBP11.18□□□□□ -0.62
CHD7-206ENST00000527900 LMOD3Q0VAK6 560 aa11.18□□□□□ -0.62
CHD7-206ENST00000527900 PROSER3Q2NL68 480 aa11.18□□□□□ -0.62
CHD7-206ENST00000527900 DPY19L2Q6NUT2 758 aa11.18□□□□□ -0.62
CHD7-206ENST00000527900 OLFM4Q6UX06 510 aa11.18□□□□□ -0.62
CHD7-206ENST00000527900 NUTM1Q86Y26 1132 aa11.18□□□□□ -0.62
CHD7-206ENST00000527900 CCDC146Q8IYE0 955 aa11.18□□□□□ -0.62
CHD7-206ENST00000527900 RUNDC1Q96C34 613 aa11.18□□□□□ -0.62
CHD7-206ENST00000527900 NYXQ9GZU5 481 aa11.18□□□□□ -0.62
CHD7-206ENST00000527900 ZBTB3Q9H5J0 574 aa11.18□□□□□ -0.62
CHD7-206ENST00000527900 PCNTO95613 3336 aa11.17□□□□□ -0.62
CHD7-206ENST00000527900 NTSR2O95665 410 aa11.17□□□□□ -0.62
CHD7-206ENST00000527900 ALDH1B1P30837 517 aa11.17□□□□□ -0.62
CHD7-206ENST00000527900 FKBP4Q02790 459 aaKnown RBP eCLIP11.17□□□□□ -0.62
CHD7-206ENST00000527900 CCDC93Q567U6 631 aa11.17□□□□□ -0.62
CHD7-206ENST00000527900 SLC10A5Q5PT55 438 aa11.17□□□□□ -0.62
CHD7-206ENST00000527900 KIF6Q6ZMV9 814 aa11.17□□□□□ -0.62
CHD7-206ENST00000527900 SMC1BQ8NDV3 1235 aa11.17□□□□□ -0.62
CHD7-206ENST00000527900 DDNO94850 711 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms