RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 MX1P20591 662 aa11.89□□□□□ -0.51
USP35-201ENST00000526425 ERBB3P21860 1342 aa11.89□□□□□ -0.51
USP35-201ENST00000526425 GPATCH11Q8N954 259 aa11.89□□□□□ -0.51
USP35-201ENST00000526425 MST1RQ04912 1400 aa11.88□□□□□ -0.51
USP35-201ENST00000526425 KIAA0232Q92628 1395 aa11.88□□□□□ -0.51
USP35-201ENST00000526425 GSPT1P15170 499 aaKnown RBP11.88□□□□□ -0.51
USP35-201ENST00000526425 PTMSP20962 102 aa11.88□□□□□ -0.51
USP35-201ENST00000526425 CCDC85AQ96PX6 553 aaPredicted RBP11.88□□□□□ -0.51
USP35-201ENST00000526425 DIAPH3Q9NSV4 1193 aa11.88□□□□□ -0.51
USP35-201ENST00000526425 PA2G4Q9UQ80 394 aaKnown RBP11.88□□□□□ -0.51
USP35-201ENST00000526425 KDRP35968 1356 aa11.88□□□□□ -0.51
USP35-201ENST00000526425 DDX58O95786 925 aaKnown RBP11.88□□□□□ -0.51
USP35-201ENST00000526425 NASPP49321 788 aaPredicted RBP11.88□□□□□ -0.51
USP35-201ENST00000526425 IRX5P78411 483 aaPredicted RBP11.88□□□□□ -0.51
USP35-201ENST00000526425 AKAP12Q02952 1782 aa11.88□□□□□ -0.51
USP35-201ENST00000526425 LMTK3Q96Q04 1460 aa11.88□□□□□ -0.51
USP35-201ENST00000526425 FMN2Q9NZ56 1722 aa11.88□□□□□ -0.51
USP35-201ENST00000526425 G3BP1Q13283 466 aaKnown RBP eCLIP11.88□□□□□ -0.51
USP35-201ENST00000526425 NFATC2IPQ8NCF5 419 aa11.88□□□□□ -0.51
USP35-201ENST00000526425 GTPBP4Q9BZE4 634 aaKnown RBP11.88□□□□□ -0.51
USP35-201ENST00000526425 K7ELQ4 463 aaPredicted RBP11.87□□□□□ -0.51
USP35-201ENST00000526425 ERC2O15083 957 aa11.87□□□□□ -0.51
USP35-201ENST00000526425 CABP4P57796 275 aa11.87□□□□□ -0.51
USP35-201ENST00000526425 MCTP1Q6DN14 999 aa11.87□□□□□ -0.51
USP35-201ENST00000526425 DDX49Q9Y6V7 483 aaKnown RBP11.87□□□□□ -0.51
USP35-201ENST00000526425 RGPD8O14715 1765 aaPredicted RBP11.87□□□□□ -0.51
USP35-201ENST00000526425 NCOA3Q9Y6Q9 1424 aa11.87□□□□□ -0.51
USP35-201ENST00000526425 ATP5J2-PTCD1G3V325 749 aa11.87□□□□□ -0.51
USP35-201ENST00000526425 PDE1AP54750 535 aa11.87□□□□□ -0.51
USP35-201ENST00000526425 CWC27Q6UX04 472 aaKnown RBP11.87□□□□□ -0.51
USP35-201ENST00000526425 IFNL2Q8IZJ0 200 aa11.87□□□□□ -0.51
USP35-201ENST00000526425 DCCP43146 1447 aa11.87□□□□□ -0.51
USP35-201ENST00000526425 NBPF7P0C2Y1 421 aaPredicted RBP11.87□□□□□ -0.51
USP35-201ENST00000526425 CLASRPQ8N2M8 674 aaKnown RBP11.87□□□□□ -0.51
USP35-201ENST00000526425 NALCNQ8IZF0 1738 aa11.86□□□□□ -0.51
USP35-201ENST00000526425 NUTM2BA6NNL0 878 aaPredicted RBP11.86□□□□□ -0.51
USP35-201ENST00000526425 NUTM2EB1AL46 878 aaPredicted RBP11.86□□□□□ -0.51
USP35-201ENST00000526425 NUTM2AQ8IVF1 878 aaPredicted RBP11.86□□□□□ -0.51
USP35-201ENST00000526425 TOMM22Q9NS69 142 aa11.86□□□□□ -0.51
USP35-201ENST00000526425 TNS3Q68CZ2 1445 aa11.86□□□□□ -0.51
USP35-201ENST00000526425 CCDC8Q9H0W5 538 aaPredicted RBP11.86□□□□□ -0.51
USP35-201ENST00000526425 ADAMTS2O95450 1211 aa11.85□□□□□ -0.51
USP35-201ENST00000526425 SSFA2P28290 1259 aa11.85□□□□□ -0.51
USP35-201ENST00000526425 MYD88Q99836 296 aa11.85□□□□□ -0.51
USP35-201ENST00000526425 TOPAZ1Q8N9V7 1692 aa11.85□□□□□ -0.51
USP35-201ENST00000526425 LOC102724159A0A0B4J2E5 919 aa11.85□□□□□ -0.51
USP35-201ENST00000526425 RNMTO43148 476 aaKnown RBP11.85□□□□□ -0.51
USP35-201ENST00000526425 PWP2Q15269 919 aaKnown RBP11.85□□□□□ -0.51
USP35-201ENST00000526425 AACSQ86V21 672 aa11.85□□□□□ -0.51
USP35-201ENST00000526425 DBF4Q9UBU7 674 aaPredicted RBP11.85□□□□□ -0.51
USP35-201ENST00000526425 CD2BP2O95400 341 aaKnown RBP11.84□□□□□ -0.51
USP35-201ENST00000526425 PRR29P0C7W0 189 aa11.84□□□□□ -0.51
USP35-201ENST00000526425 GPATCH3Q96I76 525 aa11.84□□□□□ -0.51
USP35-201ENST00000526425 NEUROD6Q96NK8 337 aa11.84□□□□□ -0.51
USP35-201ENST00000526425 DNAJC2Q99543 621 aaKnown RBP11.84□□□□□ -0.51
USP35-201ENST00000526425 PROSER3Q2NL68 480 aa11.84□□□□□ -0.51
USP35-201ENST00000526425 PLCB2Q00722 1185 aa11.84□□□□□ -0.51
USP35-201ENST00000526425 KLHDC4Q8TBB5 520 aa11.84□□□□□ -0.51
USP35-201ENST00000526425 RABEP1Q15276 862 aa11.83□□□□□ -0.51
USP35-201ENST00000526425 DYNC1I1O14576 645 aa11.83□□□□□ -0.52
USP35-201ENST00000526425 ATP8B2P98198 1209 aa11.83□□□□□ -0.52
USP35-201ENST00000526425 USP44Q9H0E7 712 aa11.83□□□□□ -0.52
USP35-201ENST00000526425 EIF4A1P60842 406 aaKnown RBP11.83□□□□□ -0.52
USP35-201ENST00000526425 TNPO1Q92973 898 aaKnown RBP11.83□□□□□ -0.52
USP35-201ENST00000526425 PIK3C2AO00443 1686 aa11.83□□□□□ -0.52
USP35-201ENST00000526425 DDX11L8A8MPP1 907 aa11.82□□□□□ -0.52
USP35-201ENST00000526425 ATP2B3Q16720 1220 aa11.82□□□□□ -0.52
USP35-201ENST00000526425 BABAM1Q9NWV8 329 aa11.82□□□□□ -0.52
USP35-201ENST00000526425 BCCIPQ9P287 314 aaKnown RBP eCLIP11.82□□□□□ -0.52
USP35-201ENST00000526425 TOM1O60784 492 aa11.82□□□□□ -0.52
USP35-201ENST00000526425 GORABQ5T7V8 394 aa11.82□□□□□ -0.52
USP35-201ENST00000526425 COPS6Q7L5N1 327 aa11.82□□□□□ -0.52
USP35-201ENST00000526425 GAS2L3Q86XJ1 694 aa11.82□□□□□ -0.52
USP35-201ENST00000526425 XAGE3Q8WTP9 111 aa11.82□□□□□ -0.52
USP35-201ENST00000526425 TAF3Q5VWG9 929 aa11.82□□□□□ -0.52
USP35-201ENST00000526425 ZCRB1Q8TBF4 217 aaKnown RBP11.82□□□□□ -0.52
USP35-201ENST00000526425 RHPN1Q8TCX5 695 aa11.82□□□□□ -0.52
USP35-201ENST00000526425 BOLA2Q9H3K6 86 aa11.82□□□□□ -0.52
USP35-201ENST00000526425 BTG4Q9NY30 223 aa11.81□□□□□ -0.52
USP35-201ENST00000526425 FSD1Q9BTV5 496 aa11.81□□□□□ -0.52
USP35-201ENST00000526425 CLGNO14967 610 aa11.81□□□□□ -0.52
USP35-201ENST00000526425 BRPF1P55201 1214 aaPredicted RBP11.81□□□□□ -0.52
USP35-201ENST00000526425 CNTROBQ8N137 903 aa11.81□□□□□ -0.52
USP35-201ENST00000526425 ZBTB3Q9H5J0 574 aa11.81□□□□□ -0.52
USP35-201ENST00000526425 IL2RBP14784 551 aa11.8□□□□□ -0.52
USP35-201ENST00000526425 U2AF2P26368 475 aaKnown RBP eCLIP11.8□□□□□ -0.52
USP35-201ENST00000526425 UBE3BQ7Z3V4 1068 aa11.8□□□□□ -0.52
USP35-201ENST00000526425 KIF1BPQ96EK5 621 aa11.8□□□□□ -0.52
USP35-201ENST00000526425 NRKQ7Z2Y5 1582 aa11.8□□□□□ -0.52
USP35-201ENST00000526425 FSD2A1L4K1 749 aa11.8□□□□□ -0.52
USP35-201ENST00000526425 UBAP1LF5GYI3 381 aa11.8□□□□□ -0.52
USP35-201ENST00000526425 PRPF40AO75400 957 aaKnown RBP11.8□□□□□ -0.52
USP35-201ENST00000526425 FOSBP53539 338 aa11.8□□□□□ -0.52
USP35-201ENST00000526425 ZGPATQ8N5A5 531 aaKnown RBP11.8□□□□□ -0.52
USP35-201ENST00000526425 DCAF5Q96JK2 942 aa11.8□□□□□ -0.52
USP35-201ENST00000526425 RNF216Q9NWF9 866 aaPredicted RBP11.8□□□□□ -0.52
USP35-201ENST00000526425 HSP90AB4PQ58FF6 505 aa11.79□□□□□ -0.52
USP35-201ENST00000526425 CHAMP1Q96JM3 812 aa11.79□□□□□ -0.52
USP35-201ENST00000526425 CRB1P82279 1406 aa11.79□□□□□ -0.52
USP35-201ENST00000526425 UNC5CLQ8IV45 518 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms