RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 L3MBTL3Q96JM7 780 aaPredicted RBP16.94■□□□□ 0.3
CCDC90B-205ENST00000525916 TRPM7Q96QT4 1865 aa16.93■□□□□ 0.3
CCDC90B-205ENST00000525916 TMEM88BA6NKF7 163 aa16.93■□□□□ 0.3
CCDC90B-205ENST00000525916 CAMTA2O94983 1202 aa16.93■□□□□ 0.3
CCDC90B-205ENST00000525916 IL6STP40189 918 aaPredicted RBP16.93■□□□□ 0.3
CCDC90B-205ENST00000525916 ST5P78524 1137 aa16.93■□□□□ 0.3
CCDC90B-205ENST00000525916 EAPPQ56P03 285 aaPredicted RBP16.93■□□□□ 0.3
CCDC90B-205ENST00000525916 MASTLQ96GX5 879 aa16.93■□□□□ 0.3
CCDC90B-205ENST00000525916 SETDB2Q96T68 719 aa16.93■□□□□ 0.3
CCDC90B-205ENST00000525916 ZNF541Q9H0D2 1346 aa16.93■□□□□ 0.3
CCDC90B-205ENST00000525916 ITGBL1O95965 494 aaPredicted RBP16.92■□□□□ 0.3
CCDC90B-205ENST00000525916 A1BGP04217 495 aa16.92■□□□□ 0.3
CCDC90B-205ENST00000525916 LBX1P52954 281 aa16.92■□□□□ 0.3
CCDC90B-205ENST00000525916 AMER1Q5JTC6 1135 aaPredicted RBP16.92■□□□□ 0.3
CCDC90B-205ENST00000525916 SOGA3Q5TF21 947 aa16.92■□□□□ 0.3
CCDC90B-205ENST00000525916 ZNF790Q6PG37 636 aa16.92■□□□□ 0.3
CCDC90B-205ENST00000525916 TEFQ10587 303 aa16.91■□□□□ 0.3
CCDC90B-205ENST00000525916 WBP1LQ9NX94 342 aa16.91■□□□□ 0.3
CCDC90B-205ENST00000525916 THSD7BQ9C0I4 1608 aa16.9■□□□□ 0.3
CCDC90B-205ENST00000525916 CCDC93Q567U6 631 aa16.9■□□□□ 0.3
CCDC90B-205ENST00000525916 TEX13AQ9BXU3 409 aaPredicted RBP16.9■□□□□ 0.3
CCDC90B-205ENST00000525916 COL3A1P02461 1466 aaPredicted RBP16.89■□□□□ 0.29
CCDC90B-205ENST00000525916 DIAPH1O60610 1272 aaKnown RBP16.89■□□□□ 0.29
CCDC90B-205ENST00000525916 PIP4K2AP48426 406 aaPredicted RBP16.89■□□□□ 0.29
CCDC90B-205ENST00000525916 NPM2Q86SE8 214 aaKnown RBP16.89■□□□□ 0.29
CCDC90B-205ENST00000525916 DZIP3Q86Y13 1208 aaKnown RBP16.89■□□□□ 0.29
CCDC90B-205ENST00000525916 IL17REQ8NFR9 667 aa16.89■□□□□ 0.29
CCDC90B-205ENST00000525916 C7orf43Q8WVR3 580 aa16.89■□□□□ 0.29
CCDC90B-205ENST00000525916 ZNF277Q9NRM2 450 aaPredicted RBP16.89■□□□□ 0.29
CCDC90B-205ENST00000525916 HACL1Q9UJ83 578 aa16.89■□□□□ 0.29
CCDC90B-205ENST00000525916 CLEC11AQ9Y240 323 aa16.89■□□□□ 0.29
CCDC90B-205ENST00000525916 LTBP1Q14766 1721 aa16.89■□□□□ 0.29
CCDC90B-205ENST00000525916 SLC34A2O95436 690 aa16.88■□□□□ 0.29
CCDC90B-205ENST00000525916 HSPA8P11142 646 aaKnown RBP16.88■□□□□ 0.29
CCDC90B-205ENST00000525916 FKBP4Q02790 459 aaKnown RBP eCLIP16.88■□□□□ 0.29
CCDC90B-205ENST00000525916 OLFM4Q6UX06 510 aa16.88■□□□□ 0.29
CCDC90B-205ENST00000525916 FMNL2Q96PY5 1086 aa16.88■□□□□ 0.29
CCDC90B-205ENST00000525916 RNF123Q5XPI4 1314 aa16.88■□□□□ 0.29
CCDC90B-205ENST00000525916 RASSF10A6NK89 507 aa16.87■□□□□ 0.29
CCDC90B-205ENST00000525916 GNAT3A8MTJ3 354 aa16.87■□□□□ 0.29
CCDC90B-205ENST00000525916 EPHX2P34913 555 aa16.87■□□□□ 0.29
CCDC90B-205ENST00000525916 FAM161AQ3B820 660 aa16.87■□□□□ 0.29
CCDC90B-205ENST00000525916 MAP1SQ66K74 1059 aaPredicted RBP16.87■□□□□ 0.29
CCDC90B-205ENST00000525916 NBPF5PQ86XG9 351 aaPredicted RBP16.87■□□□□ 0.29
CCDC90B-205ENST00000525916 NUP98P52948 1817 aa16.86■□□□□ 0.29
CCDC90B-205ENST00000525916 KCNQ3O43525 872 aa16.86■□□□□ 0.29
CCDC90B-205ENST00000525916 DEFB115Q30KQ5 88 aa16.86■□□□□ 0.29
CCDC90B-205ENST00000525916 ABHD8Q96I13 439 aa16.86■□□□□ 0.29
CCDC90B-205ENST00000525916 LAMB4A4D0S4 1761 aa16.85■□□□□ 0.29
CCDC90B-205ENST00000525916 NPR1P16066 1061 aa16.85■□□□□ 0.29
CCDC90B-205ENST00000525916 CNTROBQ8N137 903 aa16.85■□□□□ 0.29
CCDC90B-205ENST00000525916 GAS2L2Q8NHY3 880 aa16.85■□□□□ 0.29
CCDC90B-205ENST00000525916 USP16Q9Y5T5 823 aa16.84■□□□□ 0.29
CCDC90B-205ENST00000525916 WDR33Q9C0J8 1336 aaKnown RBP16.84■□□□□ 0.29
CCDC90B-205ENST00000525916 CEMIPQ8WUJ3 1361 aa16.84■□□□□ 0.29
CCDC90B-205ENST00000525916 COL4A5P29400 1685 aa16.84■□□□□ 0.29
CCDC90B-205ENST00000525916 PRAMEF22A3QJZ6 481 aa16.83■□□□□ 0.28
CCDC90B-205ENST00000525916 U2SURPO15042 1029 aaKnown RBP16.83■□□□□ 0.28
CCDC90B-205ENST00000525916 IARSP41252 1262 aaKnown RBP16.83■□□□□ 0.28
CCDC90B-205ENST00000525916 CC2D1BQ5T0F9 858 aaKnown RBP16.83■□□□□ 0.28
CCDC90B-205ENST00000525916 PNMA8AQ86V59 439 aaPredicted RBP16.83■□□□□ 0.28
CCDC90B-205ENST00000525916 ABT1Q9ULW3 272 aaKnown RBP16.83■□□□□ 0.28
CCDC90B-205ENST00000525916 CASP8AP2Q9UKL3 1982 aa16.82■□□□□ 0.28
CCDC90B-205ENST00000525916 SNED1Q8TER0 1413 aa16.82■□□□□ 0.28
CCDC90B-205ENST00000525916 KLRG2A4D1S0 409 aaPredicted RBP16.82■□□□□ 0.28
CCDC90B-205ENST00000525916 FAM177BA6PVY3 158 aa16.82■□□□□ 0.28
CCDC90B-205ENST00000525916 BTBD11A6QL63 1104 aa16.82■□□□□ 0.28
CCDC90B-205ENST00000525916 FZD9O00144 591 aa16.82■□□□□ 0.28
CCDC90B-205ENST00000525916 MAP2K1Q02750 393 aaPredicted RBP16.82■□□□□ 0.28
CCDC90B-205ENST00000525916 CLEC4GQ6UXB4 293 aa16.82■□□□□ 0.28
CCDC90B-205ENST00000525916 RTKN2Q8IZC4 609 aa16.82■□□□□ 0.28
CCDC90B-205ENST00000525916 ZNF652Q9Y2D9 606 aa16.82■□□□□ 0.28
CCDC90B-205ENST00000525916 SYNE4Q8N205 404 aa16.81■□□□□ 0.28
CCDC90B-205ENST00000525916 FMR1Q06787 632 aaKnown RBP eCLIP16.8■□□□□ 0.28
CCDC90B-205ENST00000525916 GPC2Q8N158 579 aa16.8■□□□□ 0.28
CCDC90B-205ENST00000525916 DDX21Q9NR30 783 aaKnown RBP eCLIP16.8■□□□□ 0.28
CCDC90B-205ENST00000525916 NIP7Q9Y221 180 aaKnown RBP eCLIP16.8■□□□□ 0.28
CCDC90B-205ENST00000525916 KIF7Q2M1P5 1343 aa16.79■□□□□ 0.28
CCDC90B-205ENST00000525916 TPTE2Q6XPS3 522 aa16.79■□□□□ 0.28
CCDC90B-205ENST00000525916 PAXIP1Q6ZW49 1069 aaPredicted RBP16.79■□□□□ 0.28
CCDC90B-205ENST00000525916 GRM1Q13255 1194 aa16.78■□□□□ 0.28
CCDC90B-205ENST00000525916 CAPNS2Q96L46 248 aa16.78■□□□□ 0.28
CCDC90B-205ENST00000525916 GJA3Q9Y6H8 435 aa16.78■□□□□ 0.28
CCDC90B-205ENST00000525916 DLG5Q8TDM6 1919 aa16.78■□□□□ 0.28
CCDC90B-205ENST00000525916 ABCC12Q96J65 1359 aa16.77■□□□□ 0.28
CCDC90B-205ENST00000525916 CCDC85CA6NKD9 419 aa16.77■□□□□ 0.28
CCDC90B-205ENST00000525916 NBPF26B4DH59 902 aa16.77■□□□□ 0.28
CCDC90B-205ENST00000525916 PER1O15534 1290 aaPredicted RBP16.77■□□□□ 0.28
CCDC90B-205ENST00000525916 ALDH1B1P30837 517 aa16.77■□□□□ 0.28
CCDC90B-205ENST00000525916 CNGB1Q14028 1251 aaPredicted RBP16.77■□□□□ 0.28
CCDC90B-205ENST00000525916 CYP4F22Q6NT55 531 aa16.77■□□□□ 0.28
CCDC90B-205ENST00000525916 NBPF10Q6P3W6 841 aaKnown RBP16.77■□□□□ 0.28
CCDC90B-205ENST00000525916 NBPF15Q8N660 670 aa16.77■□□□□ 0.28
CCDC90B-205ENST00000525916 PHACTR3Q96KR7 559 aa16.77■□□□□ 0.28
CCDC90B-205ENST00000525916 SNRPA1P09661 255 aaKnown RBP16.76■□□□□ 0.27
CCDC90B-205ENST00000525916 PRKAR2BP31323 418 aa16.76■□□□□ 0.27
CCDC90B-205ENST00000525916 HLFQ16534 295 aa16.76■□□□□ 0.27
CCDC90B-205ENST00000525916 JDP2Q8WYK2 163 aa16.76■□□□□ 0.27
CCDC90B-205ENST00000525916 PSMD1Q99460 953 aa16.76■□□□□ 0.27
CCDC90B-205ENST00000525916 TSKSQ9UJT2 592 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms