RNA–Protein interactions for RNA: ENST00000524815.5

PACS1-203, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4 BASIC

Gene PACS1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-203ENST00000524815 TEX13AQ9BXU3 409 aaPredicted RBP20.17■□□□□ 0.82
PACS1-203ENST00000524815 TMEM88BA6NKF7 163 aa20.16■□□□□ 0.82
PACS1-203ENST00000524815 ST5P78524 1137 aa20.15■□□□□ 0.82
PACS1-203ENST00000524815 WBP1LQ9NX94 342 aa20.15■□□□□ 0.82
PACS1-203ENST00000524815 DIAPH1O60610 1272 aaKnown RBP20.14■□□□□ 0.81
PACS1-203ENST00000524815 AIDAQ96BJ3 306 aa20.14■□□□□ 0.81
PACS1-203ENST00000524815 SCN4AP35499 1836 aa20.13■□□□□ 0.81
PACS1-203ENST00000524815 ZNF541Q9H0D2 1346 aa20.13■□□□□ 0.81
PACS1-203ENST00000524815 NPHP1O15259 732 aa20.13■□□□□ 0.81
PACS1-203ENST00000524815 LBX1P52954 281 aa20.13■□□□□ 0.81
PACS1-203ENST00000524815 TEFQ10587 303 aa20.13■□□□□ 0.81
PACS1-203ENST00000524815 CACNA1SQ13698 1873 aa20.13■□□□□ 0.81
PACS1-203ENST00000524815 ARFGEF2Q9Y6D5 1785 aa20.13■□□□□ 0.81
PACS1-203ENST00000524815 EAPPQ56P03 285 aaPredicted RBP20.12■□□□□ 0.81
PACS1-203ENST00000524815 GNAT3A8MTJ3 354 aa20.11■□□□□ 0.81
PACS1-203ENST00000524815 KCNQ3O43525 872 aa20.11■□□□□ 0.81
PACS1-203ENST00000524815 CCDC93Q567U6 631 aa20.11■□□□□ 0.81
PACS1-203ENST00000524815 DZIP3Q86Y13 1208 aaKnown RBP20.11■□□□□ 0.81
PACS1-203ENST00000524815 FMNL2Q96PY5 1086 aa20.11■□□□□ 0.81
PACS1-203ENST00000524815 ZNF277Q9NRM2 450 aaPredicted RBP20.11■□□□□ 0.81
PACS1-203ENST00000524815 FKBP4Q02790 459 aaKnown RBP eCLIP20.1■□□□□ 0.81
PACS1-203ENST00000524815 TRIM26Q12899 539 aaPredicted RBP20.1■□□□□ 0.81
PACS1-203ENST00000524815 OLFM4Q6UX06 510 aa20.1■□□□□ 0.81
PACS1-203ENST00000524815 HACL1Q9UJ83 578 aa20.1■□□□□ 0.81
PACS1-203ENST00000524815 SIPA1L3O60292 1781 aaPredicted RBP20.1■□□□□ 0.81
PACS1-203ENST00000524815 ADAMTSL1Q8N6G6 1762 aa20.09■□□□□ 0.81
PACS1-203ENST00000524815 KLRG2A4D1S0 409 aaPredicted RBP20.09■□□□□ 0.81
PACS1-203ENST00000524815 RASSF10A6NK89 507 aa20.09■□□□□ 0.81
PACS1-203ENST00000524815 NPR1P16066 1061 aa20.09■□□□□ 0.81
PACS1-203ENST00000524815 EPHX2P34913 555 aa20.09■□□□□ 0.81
PACS1-203ENST00000524815 PIP4K2AP48426 406 aaPredicted RBP20.09■□□□□ 0.81
PACS1-203ENST00000524815 USP16Q9Y5T5 823 aa20.09■□□□□ 0.81
PACS1-203ENST00000524815 BCORQ6W2J9 1755 aa20.08■□□□□ 0.81
PACS1-203ENST00000524815 SLC34A2O95436 690 aa20.08■□□□□ 0.81
PACS1-203ENST00000524815 HSPA8P11142 646 aaKnown RBP20.08■□□□□ 0.81
PACS1-203ENST00000524815 DEFB115Q30KQ5 88 aa20.08■□□□□ 0.81
PACS1-203ENST00000524815 NPM2Q86SE8 214 aaKnown RBP20.08■□□□□ 0.81
PACS1-203ENST00000524815 NBPF5PQ86XG9 351 aaPredicted RBP20.08■□□□□ 0.81
PACS1-203ENST00000524815 GAS2L2Q8NHY3 880 aa20.08■□□□□ 0.81
PACS1-203ENST00000524815 CLEC11AQ9Y240 323 aa20.08■□□□□ 0.81
PACS1-203ENST00000524815 CLSPNQ9HAW4 1339 aa20.07■□□□□ 0.8
PACS1-203ENST00000524815 MAP1SQ66K74 1059 aaPredicted RBP20.07■□□□□ 0.8
PACS1-203ENST00000524815 CLEC4GQ6UXB4 293 aa20.07■□□□□ 0.8
PACS1-203ENST00000524815 CNTROBQ8N137 903 aa20.07■□□□□ 0.8
PACS1-203ENST00000524815 CEMIPQ8WUJ3 1361 aa20.07■□□□□ 0.8
PACS1-203ENST00000524815 RNF123Q5XPI4 1314 aa20.06■□□□□ 0.8
PACS1-203ENST00000524815 PRAMEF22A3QJZ6 481 aa20.06■□□□□ 0.8
PACS1-203ENST00000524815 FZD9O00144 591 aa20.06■□□□□ 0.8
PACS1-203ENST00000524815 PER1O15534 1290 aaPredicted RBP20.06■□□□□ 0.8
PACS1-203ENST00000524815 ABHD8Q96I13 439 aa20.06■□□□□ 0.8
PACS1-203ENST00000524815 WDR33Q9C0J8 1336 aaKnown RBP20.05■□□□□ 0.8
PACS1-203ENST00000524815 BTBD11A6QL63 1104 aa20.05■□□□□ 0.8
PACS1-203ENST00000524815 PNMA8AQ86V59 439 aaPredicted RBP20.05■□□□□ 0.8
PACS1-203ENST00000524815 RTKN2Q8IZC4 609 aa20.05■□□□□ 0.8
PACS1-203ENST00000524815 COL3A1P02461 1466 aaPredicted RBP20.05■□□□□ 0.8
PACS1-203ENST00000524815 U2SURPO15042 1029 aaKnown RBP20.04■□□□□ 0.8
PACS1-203ENST00000524815 CC2D1BQ5T0F9 858 aaKnown RBP20.04■□□□□ 0.8
PACS1-203ENST00000524815 IARSP41252 1262 aaKnown RBP20.03■□□□□ 0.8
PACS1-203ENST00000524815 MAP2K1Q02750 393 aaPredicted RBP20.03■□□□□ 0.8
PACS1-203ENST00000524815 TPTE2Q6XPS3 522 aa20.03■□□□□ 0.8
PACS1-203ENST00000524815 SYNE4Q8N205 404 aa20.03■□□□□ 0.8
PACS1-203ENST00000524815 FAM161AQ3B820 660 aa20.02■□□□□ 0.8
PACS1-203ENST00000524815 GPC2Q8N158 579 aa20.02■□□□□ 0.8
PACS1-203ENST00000524815 PHACTR3Q96KR7 559 aa20.02■□□□□ 0.8
PACS1-203ENST00000524815 ZNF652Q9Y2D9 606 aa20.02■□□□□ 0.8
PACS1-203ENST00000524815 KIF7Q2M1P5 1343 aa20.02■□□□□ 0.79
PACS1-203ENST00000524815 ABT1Q9ULW3 272 aaKnown RBP20.01■□□□□ 0.79
PACS1-203ENST00000524815 NIP7Q9Y221 180 aaKnown RBP eCLIP20.01■□□□□ 0.79
PACS1-203ENST00000524815 SNED1Q8TER0 1413 aa20.01■□□□□ 0.79
PACS1-203ENST00000524815 NBPF26B4DH59 902 aa20■□□□□ 0.79
PACS1-203ENST00000524815 FMR1Q06787 632 aaKnown RBP eCLIP20■□□□□ 0.79
PACS1-203ENST00000524815 NBPF10Q6P3W6 841 aaKnown RBP20■□□□□ 0.79
PACS1-203ENST00000524815 NBPF15Q8N660 670 aa20■□□□□ 0.79
PACS1-203ENST00000524815 PCGF6Q9BYE7 350 aa20■□□□□ 0.79
PACS1-203ENST00000524815 DDX21Q9NR30 783 aaKnown RBP eCLIP20■□□□□ 0.79
PACS1-203ENST00000524815 FAM177BA6PVY3 158 aa19.99■□□□□ 0.79
PACS1-203ENST00000524815 SNRPA1P09661 255 aaKnown RBP19.99■□□□□ 0.79
PACS1-203ENST00000524815 ALDH1B1P30837 517 aa19.99■□□□□ 0.79
PACS1-203ENST00000524815 COL4A5P29400 1685 aa19.98■□□□□ 0.79
PACS1-203ENST00000524815 RGL2O15211 777 aa19.98■□□□□ 0.79
PACS1-203ENST00000524815 HLFQ16534 295 aa19.98■□□□□ 0.79
PACS1-203ENST00000524815 PSMD1Q99460 953 aa19.98■□□□□ 0.79
PACS1-203ENST00000524815 LTBP1Q14766 1721 aa19.97■□□□□ 0.79
PACS1-203ENST00000524815 PRKAR2BP31323 418 aa19.96■□□□□ 0.79
PACS1-203ENST00000524815 CRY2Q49AN0 593 aa19.96■□□□□ 0.79
PACS1-203ENST00000524815 JDP2Q8WYK2 163 aa19.96■□□□□ 0.79
PACS1-203ENST00000524815 CAPNS2Q96L46 248 aa19.96■□□□□ 0.79
PACS1-203ENST00000524815 EPS15P42566 896 aa19.95■□□□□ 0.78
PACS1-203ENST00000524815 CST9Q5W186 159 aa19.95■□□□□ 0.78
PACS1-203ENST00000524815 RSPH6AQ9H0K4 717 aa19.95■□□□□ 0.78
PACS1-203ENST00000524815 GJA3Q9Y6H8 435 aa19.95■□□□□ 0.78
PACS1-203ENST00000524815 THSD7BQ9C0I4 1608 aa19.94■□□□□ 0.78
PACS1-203ENST00000524815 RGS19P49795 217 aa19.94■□□□□ 0.78
PACS1-203ENST00000524815 SCNN1DP51172 638 aa19.94■□□□□ 0.78
PACS1-203ENST00000524815 EIF6P56537 245 aaKnown RBP19.94■□□□□ 0.78
PACS1-203ENST00000524815 CYP4F22Q6NT55 531 aa19.94■□□□□ 0.78
PACS1-203ENST00000524815 MCM10Q7L590 875 aa19.94■□□□□ 0.78
PACS1-203ENST00000524815 CCDC85CA6NKD9 419 aa19.93■□□□□ 0.78
PACS1-203ENST00000524815 GTF2E1P29083 439 aaPredicted RBP19.93■□□□□ 0.78
PACS1-203ENST00000524815 CNGB1Q14028 1251 aaPredicted RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms