RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 FANCIQ9NVI1 1328 aa22.65■■□□□ 1.22
PACSIN3-202ENST00000524509 TSR2Q969E8 191 aaKnown RBP22.65■■□□□ 1.22
PACSIN3-202ENST00000524509 ZBTB1Q9Y2K1 713 aa22.65■■□□□ 1.22
PACSIN3-202ENST00000524509 MYH14Q7Z406 1995 aaKnown RBP22.64■■□□□ 1.21
PACSIN3-202ENST00000524509 ZPR1O75312 459 aa22.64■■□□□ 1.21
PACSIN3-202ENST00000524509 A1BGP04217 495 aa22.64■■□□□ 1.21
PACSIN3-202ENST00000524509 EIF2S2P20042 333 aaKnown RBP22.64■■□□□ 1.21
PACSIN3-202ENST00000524509 HDGFL1Q5TGJ6 251 aa22.64■■□□□ 1.21
PACSIN3-202ENST00000524509 CCDC30Q5VVM6 783 aa22.64■■□□□ 1.21
PACSIN3-202ENST00000524509 ZBED9Q6R2W3 1325 aa22.63■■□□□ 1.21
PACSIN3-202ENST00000524509 EIF5P55010 431 aaKnown RBP22.63■■□□□ 1.21
PACSIN3-202ENST00000524509 HTRA3P83110 453 aa22.63■■□□□ 1.21
PACSIN3-202ENST00000524509 SLFN5Q08AF3 891 aa22.63■■□□□ 1.21
PACSIN3-202ENST00000524509 DBF4Q9UBU7 674 aaPredicted RBP22.63■■□□□ 1.21
PACSIN3-202ENST00000524509 TJP1Q07157 1748 aa22.62■■□□□ 1.21
PACSIN3-202ENST00000524509 PRAMEF22A3QJZ6 481 aa22.62■■□□□ 1.21
PACSIN3-202ENST00000524509 TWISTNBQ3B726 338 aaPredicted RBP22.62■■□□□ 1.21
PACSIN3-202ENST00000524509 DALRD3Q5D0E6 543 aaKnown RBP22.62■■□□□ 1.21
PACSIN3-202ENST00000524509 COL13A1Q5TAT6 717 aaPredicted RBP22.62■■□□□ 1.21
PACSIN3-202ENST00000524509 PCNTO95613 3336 aa22.61■■□□□ 1.21
PACSIN3-202ENST00000524509 RGL2O15211 777 aa22.61■■□□□ 1.21
PACSIN3-202ENST00000524509 TNRC6CQ9HCJ0 1690 aaKnown RBP22.61■■□□□ 1.21
PACSIN3-202ENST00000524509 COL15A1P39059 1388 aa22.61■■□□□ 1.21
PACSIN3-202ENST00000524509 CT47B1P0C2W7 299 aaPredicted RBP22.6■■□□□ 1.21
PACSIN3-202ENST00000524509 C8orf58Q8NAV2 365 aa22.6■■□□□ 1.21
PACSIN3-202ENST00000524509 ZNF428Q96B54 188 aa22.6■■□□□ 1.21
PACSIN3-202ENST00000524509 STK31Q9BXU1 1019 aa22.6■■□□□ 1.21
PACSIN3-202ENST00000524509 DDX21Q9NR30 783 aaKnown RBP eCLIP22.6■■□□□ 1.21
PACSIN3-202ENST00000524509 HYPKQ9NX55 129 aa22.6■■□□□ 1.21
PACSIN3-202ENST00000524509 RNF181Q9P0P0 153 aa22.6■■□□□ 1.21
PACSIN3-202ENST00000524509 NARFQ9UHQ1 456 aa22.59■■□□□ 1.21
PACSIN3-202ENST00000524509 ZNF330Q9Y3S2 320 aaPredicted RBP22.59■■□□□ 1.21
PACSIN3-202ENST00000524509 SBF1O95248 1867 aa22.59■■□□□ 1.21
PACSIN3-202ENST00000524509 USP42Q9H9J4 1324 aaKnown RBP22.58■■□□□ 1.21
PACSIN3-202ENST00000524509 ELL2O00472 640 aaPredicted RBP22.58■■□□□ 1.21
PACSIN3-202ENST00000524509 EXOSC9Q06265 439 aaKnown RBP22.58■■□□□ 1.21
PACSIN3-202ENST00000524509 KRT24Q2M2I5 525 aa22.58■■□□□ 1.21
PACSIN3-202ENST00000524509 RRAGCQ9HB90 399 aa22.58■■□□□ 1.21
PACSIN3-202ENST00000524509 SPINK5Q9NQ38 1064 aaPredicted RBP22.58■■□□□ 1.21
PACSIN3-202ENST00000524509 ZNF652Q9Y2D9 606 aa22.58■■□□□ 1.21
PACSIN3-202ENST00000524509 DDR1Q08345 913 aa22.57■■□□□ 1.2
PACSIN3-202ENST00000524509 FKBP8Q14318 412 aa22.57■■□□□ 1.2
PACSIN3-202ENST00000524509 KIF6Q6ZMV9 814 aa22.57■■□□□ 1.2
PACSIN3-202ENST00000524509 DZIP3Q86Y13 1208 aaKnown RBP22.57■■□□□ 1.2
PACSIN3-202ENST00000524509 TRMT2AQ8IZ69 625 aaKnown RBP22.57■■□□□ 1.2
PACSIN3-202ENST00000524509 NBPF26B4DH59 902 aa22.56■■□□□ 1.2
PACSIN3-202ENST00000524509 MYL6BP14649 208 aa22.56■■□□□ 1.2
PACSIN3-202ENST00000524509 NBPF10Q6P3W6 841 aaKnown RBP22.56■■□□□ 1.2
PACSIN3-202ENST00000524509 CLEC4GQ6UXB4 293 aa22.56■■□□□ 1.2
PACSIN3-202ENST00000524509 NBPF15Q8N660 670 aa22.56■■□□□ 1.2
PACSIN3-202ENST00000524509 SRP68Q9UHB9 627 aaKnown RBP22.56■■□□□ 1.2
PACSIN3-202ENST00000524509 SMC1BQ8NDV3 1235 aa22.55■■□□□ 1.2
PACSIN3-202ENST00000524509 ZC3H4Q9UPT8 1303 aaKnown RBP22.55■■□□□ 1.2
PACSIN3-202ENST00000524509 LAMB4A4D0S4 1761 aa22.54■■□□□ 1.2
PACSIN3-202ENST00000524509 ERVV-1B6SEH8 477 aa22.54■■□□□ 1.2
PACSIN3-202ENST00000524509 VAMP4O75379 141 aa22.54■■□□□ 1.2
PACSIN3-202ENST00000524509 CHRNA5P30532 468 aa22.54■■□□□ 1.2
PACSIN3-202ENST00000524509 TSPYL6Q8N831 410 aa22.54■■□□□ 1.2
PACSIN3-202ENST00000524509 CHPF2Q9P2E5 772 aa22.54■■□□□ 1.2
PACSIN3-202ENST00000524509 PDIA6Q15084 440 aa22.53■■□□□ 1.2
PACSIN3-202ENST00000524509 TNS4Q8IZW8 715 aa22.53■■□□□ 1.2
PACSIN3-202ENST00000524509 NECTIN2Q92692 538 aa22.53■■□□□ 1.2
PACSIN3-202ENST00000524509 POLRMTO00411 1230 aaKnown RBP22.52■■□□□ 1.2
PACSIN3-202ENST00000524509 TM4SF1P30408 202 aa22.52■■□□□ 1.2
PACSIN3-202ENST00000524509 CDCA7LQ96GN5 454 aa22.52■■□□□ 1.2
PACSIN3-202ENST00000524509 DDX58O95786 925 aaKnown RBP22.51■■□□□ 1.19
PACSIN3-202ENST00000524509 USPL1Q5W0Q7 1092 aa22.51■■□□□ 1.19
PACSIN3-202ENST00000524509 TBC1D2BQ9UPU7 963 aa22.51■■□□□ 1.19
PACSIN3-202ENST00000524509 PIP4K2AP48426 406 aaPredicted RBP22.5■■□□□ 1.19
PACSIN3-202ENST00000524509 PRELPP51888 382 aa22.5■■□□□ 1.19
PACSIN3-202ENST00000524509 MAP3K15Q6ZN16 1313 aa22.5■■□□□ 1.19
PACSIN3-202ENST00000524509 CAPN15O75808 1086 aa22.49■■□□□ 1.19
PACSIN3-202ENST00000524509 CAMTA2O94983 1202 aa22.49■■□□□ 1.19
PACSIN3-202ENST00000524509 HSP90AB3PQ58FF7 597 aa22.49■■□□□ 1.19
PACSIN3-202ENST00000524509 COPS6Q7L5N1 327 aa22.49■■□□□ 1.19
PACSIN3-202ENST00000524509 SLC4A2P04920 1241 aa22.48■■□□□ 1.19
PACSIN3-202ENST00000524509 VEGFAP15692 232 aaPredicted RBP22.47■■□□□ 1.19
PACSIN3-202ENST00000524509 ALDH1L2Q3SY69 923 aa22.47■■□□□ 1.19
PACSIN3-202ENST00000524509 LRP10Q7Z4F1 713 aa22.47■■□□□ 1.19
PACSIN3-202ENST00000524509 XAGE3Q8WTP9 111 aa22.47■■□□□ 1.19
PACSIN3-202ENST00000524509 GLTPD2A6NH11 291 aa22.46■■□□□ 1.19
PACSIN3-202ENST00000524509 LMNB1P20700 586 aa22.46■■□□□ 1.19
PACSIN3-202ENST00000524509 RASSF7Q02833 373 aa22.46■■□□□ 1.19
PACSIN3-202ENST00000524509 AIMP1Q12904 312 aaKnown RBP22.46■■□□□ 1.19
PACSIN3-202ENST00000524509 PROSER3Q2NL68 480 aa22.46■■□□□ 1.19
PACSIN3-202ENST00000524509 ANKRD13DQ6ZTN6 518 aa22.46■■□□□ 1.19
PACSIN3-202ENST00000524509 PLBD2Q8NHP8 589 aa22.46■■□□□ 1.19
PACSIN3-202ENST00000524509 SETDB2Q96T68 719 aa22.46■■□□□ 1.19
PACSIN3-202ENST00000524509 GIGYF2Q6Y7W6 1299 aaKnown RBP22.45■■□□□ 1.18
PACSIN3-202ENST00000524509 NRXN2Q9P2S2 1712 aa22.45■■□□□ 1.18
PACSIN3-202ENST00000524509 DLEC1Q9Y238 1755 aa22.45■■□□□ 1.18
PACSIN3-202ENST00000524509 AFDNP55196 1824 aaKnown RBP22.45■■□□□ 1.18
PACSIN3-202ENST00000524509 ANXA1P04083 346 aa22.44■■□□□ 1.18
PACSIN3-202ENST00000524509 TTLL7Q6ZT98 887 aa22.44■■□□□ 1.18
PACSIN3-202ENST00000524509 RIC3Q7Z5B4 369 aa22.43■■□□□ 1.18
PACSIN3-202ENST00000524509 HSPA1AP0DMV8 641 aaKnown RBP22.42■■□□□ 1.18
PACSIN3-202ENST00000524509 HSPA1BP0DMV9 641 aaKnown RBP22.42■■□□□ 1.18
PACSIN3-202ENST00000524509 ZBTB3Q9H5J0 574 aa22.42■■□□□ 1.18
PACSIN3-202ENST00000524509 BCL2L12Q9HB09 334 aa22.42■■□□□ 1.18
PACSIN3-202ENST00000524509 CARMIL3Q8ND23 1372 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms