RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 PROSER3Q2NL68 480 aa19.53■□□□□ 0.72
SF3B2-202ENST00000524475 SPINK5Q9NQ38 1064 aaPredicted RBP19.53■□□□□ 0.72
SF3B2-202ENST00000524475 CARMIL3Q8ND23 1372 aa19.53■□□□□ 0.72
SF3B2-202ENST00000524475 ATP10DQ9P241 1426 aa19.52■□□□□ 0.72
SF3B2-202ENST00000524475 CACNA1FO60840 1977 aa19.52■□□□□ 0.72
SF3B2-202ENST00000524475 KIF6Q6ZMV9 814 aa19.52■□□□□ 0.72
SF3B2-202ENST00000524475 HYPKQ9NX55 129 aa19.52■□□□□ 0.72
SF3B2-202ENST00000524475 CHPF2Q9P2E5 772 aa19.52■□□□□ 0.72
SF3B2-202ENST00000524475 E9PSI1 815 aa19.51■□□□□ 0.71
SF3B2-202ENST00000524475 TWISTNBQ3B726 338 aaPredicted RBP19.51■□□□□ 0.71
SF3B2-202ENST00000524475 CCDC30Q5VVM6 783 aa19.51■□□□□ 0.71
SF3B2-202ENST00000524475 TBC1D9BQ66K14 1250 aa19.51■□□□□ 0.71
SF3B2-202ENST00000524475 TTLL7Q6ZT98 887 aa19.51■□□□□ 0.71
SF3B2-202ENST00000524475 TSPYL6Q8N831 410 aa19.51■□□□□ 0.71
SF3B2-202ENST00000524475 GOLGB1Q14789 3259 aaKnown RBP19.5■□□□□ 0.71
SF3B2-202ENST00000524475 NECTIN2Q92692 538 aa19.5■□□□□ 0.71
SF3B2-202ENST00000524475 KIAA1551Q9HCM1 1747 aa19.5■□□□□ 0.71
SF3B2-202ENST00000524475 ELL2O00472 640 aaPredicted RBP19.49■□□□□ 0.71
SF3B2-202ENST00000524475 SETDB2Q96T68 719 aa19.49■□□□□ 0.71
SF3B2-202ENST00000524475 ANKRD36CQ5JPF3 1778 aa19.48■□□□□ 0.71
SF3B2-202ENST00000524475 ANXA1P04083 346 aa19.48■□□□□ 0.71
SF3B2-202ENST00000524475 SERPINB2P05120 415 aa19.48■□□□□ 0.71
SF3B2-202ENST00000524475 TGFB2P61812 414 aa19.48■□□□□ 0.71
SF3B2-202ENST00000524475 GIGYF2Q6Y7W6 1299 aaKnown RBP19.48■□□□□ 0.71
SF3B2-202ENST00000524475 COPS6Q7L5N1 327 aa19.48■□□□□ 0.71
SF3B2-202ENST00000524475 IBTKQ9P2D0 1353 aaPredicted RBP19.47■□□□□ 0.71
SF3B2-202ENST00000524475 EXOSC9Q06265 439 aaKnown RBP19.47■□□□□ 0.71
SF3B2-202ENST00000524475 SLFN5Q08AF3 891 aa19.47■□□□□ 0.71
SF3B2-202ENST00000524475 HLFQ16534 295 aa19.47■□□□□ 0.71
SF3B2-202ENST00000524475 XAGE3Q8WTP9 111 aa19.47■□□□□ 0.71
SF3B2-202ENST00000524475 UTRNP46939 3433 aa19.47■□□□□ 0.71
SF3B2-202ENST00000524475 VAMP4O75379 141 aa19.46■□□□□ 0.71
SF3B2-202ENST00000524475 TRMT2AQ8IZ69 625 aaKnown RBP19.46■□□□□ 0.71
SF3B2-202ENST00000524475 NLGN2Q8NFZ4 835 aa19.46■□□□□ 0.71
SF3B2-202ENST00000524475 PXDNLA1KZ92 1463 aa19.46■□□□□ 0.71
SF3B2-202ENST00000524475 HSP90AB3PQ58FF7 597 aa19.45■□□□□ 0.7
SF3B2-202ENST00000524475 BICDL1Q6ZP65 573 aa19.45■□□□□ 0.7
SF3B2-202ENST00000524475 KLHL34Q8N239 644 aa19.45■□□□□ 0.7
SF3B2-202ENST00000524475 STK31Q9BXU1 1019 aa19.45■□□□□ 0.7
SF3B2-202ENST00000524475 ZBTB3Q9H5J0 574 aa19.45■□□□□ 0.7
SF3B2-202ENST00000524475 NIP7Q9Y221 180 aaKnown RBP eCLIP19.45■□□□□ 0.7
SF3B2-202ENST00000524475 BRCA1P38398 1863 aaKnown RBP19.44■□□□□ 0.7
SF3B2-202ENST00000524475 ZNF34Q8IZ26 560 aa19.44■□□□□ 0.7
SF3B2-202ENST00000524475 PLBD2Q8NHP8 589 aa19.44■□□□□ 0.7
SF3B2-202ENST00000524475 ARFGEF2Q9Y6D5 1785 aa19.44■□□□□ 0.7
SF3B2-202ENST00000524475 PRR5LQ6MZQ0 368 aa19.43■□□□□ 0.7
SF3B2-202ENST00000524475 ANKRD13DQ6ZTN6 518 aa19.43■□□□□ 0.7
SF3B2-202ENST00000524475 PDZRN3Q9UPQ7 1066 aa19.43■□□□□ 0.7
SF3B2-202ENST00000524475 ANKRD31Q8N7Z5 1873 aa19.43■□□□□ 0.7
SF3B2-202ENST00000524475 DLEC1Q9Y238 1755 aa19.42■□□□□ 0.7
SF3B2-202ENST00000524475 AIMP1Q12904 312 aaKnown RBP19.42■□□□□ 0.7
SF3B2-202ENST00000524475 PARP10Q53GL7 1025 aa19.42■□□□□ 0.7
SF3B2-202ENST00000524475 CNBD1Q8NA66 436 aa19.42■□□□□ 0.7
SF3B2-202ENST00000524475 ZNF428Q96B54 188 aa19.42■□□□□ 0.7
SF3B2-202ENST00000524475 N4BP2Q86UW6 1770 aaPredicted RBP19.42■□□□□ 0.7
SF3B2-202ENST00000524475 RIC1Q4ADV7 1423 aa19.42■□□□□ 0.7
SF3B2-202ENST00000524475 TCIRG1Q13488 830 aa19.41■□□□□ 0.7
SF3B2-202ENST00000524475 TPTE2Q6XPS3 522 aa19.41■□□□□ 0.7
SF3B2-202ENST00000524475 NBPF5PQ86XG9 351 aaPredicted RBP19.41■□□□□ 0.7
SF3B2-202ENST00000524475 BRIP1Q9BX63 1249 aa19.41■□□□□ 0.7
SF3B2-202ENST00000524475 NYXQ9GZU5 481 aa19.41■□□□□ 0.7
SF3B2-202ENST00000524475 RNF123Q5XPI4 1314 aa19.41■□□□□ 0.7
SF3B2-202ENST00000524475 UBN2Q6ZU65 1347 aa19.41■□□□□ 0.7
SF3B2-202ENST00000524475 CT47B1P0C2W7 299 aaPredicted RBP19.4■□□□□ 0.7
SF3B2-202ENST00000524475 ST5P78524 1137 aa19.4■□□□□ 0.7
SF3B2-202ENST00000524475 HNRNPUQ00839 825 aaKnown RBP eCLIP19.4■□□□□ 0.7
SF3B2-202ENST00000524475 PHAXQ9H814 394 aaKnown RBP19.4■□□□□ 0.7
SF3B2-202ENST00000524475 DCAF8L1A6NGE4 600 aa19.39■□□□□ 0.69
SF3B2-202ENST00000524475 DDX58O95786 925 aaKnown RBP19.39■□□□□ 0.69
SF3B2-202ENST00000524475 TRIM28Q13263 835 aaKnown RBP19.39■□□□□ 0.69
SF3B2-202ENST00000524475 CDCA7LQ96GN5 454 aa19.39■□□□□ 0.69
SF3B2-202ENST00000524475 ZBED9Q6R2W3 1325 aa19.39■□□□□ 0.69
SF3B2-202ENST00000524475 SLC4A2P04920 1241 aa19.38■□□□□ 0.69
SF3B2-202ENST00000524475 PDE6BP35913 854 aa19.38■□□□□ 0.69
SF3B2-202ENST00000524475 PPP1R42Q7Z4L9 355 aa19.38■□□□□ 0.69
SF3B2-202ENST00000524475 ISCA1Q9BUE6 129 aa19.38■□□□□ 0.69
SF3B2-202ENST00000524475 KLRG2A4D1S0 409 aaPredicted RBP19.37■□□□□ 0.69
SF3B2-202ENST00000524475 NTSR2O95665 410 aa19.37■□□□□ 0.69
SF3B2-202ENST00000524475 DPEP1P16444 411 aa19.37■□□□□ 0.69
SF3B2-202ENST00000524475 KCNA3P22001 575 aa19.37■□□□□ 0.69
SF3B2-202ENST00000524475 GPTP24298 496 aa19.36■□□□□ 0.69
SF3B2-202ENST00000524475 FLIIQ13045 1269 aa19.36■□□□□ 0.69
SF3B2-202ENST00000524475 SUSD4Q5VX71 490 aa19.36■□□□□ 0.69
SF3B2-202ENST00000524475 NLRP10Q86W26 655 aa19.36■□□□□ 0.69
SF3B2-202ENST00000524475 ARFGEF1Q9Y6D6 1849 aa19.36■□□□□ 0.69
SF3B2-202ENST00000524475 COL11A2P13942 1736 aaPredicted RBP19.36■□□□□ 0.69
SF3B2-202ENST00000524475 A0A0G2JLW4 131 aa19.35■□□□□ 0.69
SF3B2-202ENST00000524475 NPHP1O15259 732 aa19.35■□□□□ 0.69
SF3B2-202ENST00000524475 KSR2Q6VAB6 950 aa19.35■□□□□ 0.69
SF3B2-202ENST00000524475 RIC3Q7Z5B4 369 aa19.35■□□□□ 0.69
SF3B2-202ENST00000524475 ADCY9O60503 1353 aa19.34■□□□□ 0.69
SF3B2-202ENST00000524475 METTL22Q9BUU2 404 aaPredicted RBP19.34■□□□□ 0.69
SF3B2-202ENST00000524475 UTP14AQ9BVJ6 771 aaKnown RBP19.34■□□□□ 0.69
SF3B2-202ENST00000524475 PIM2Q9P1W9 311 aa19.34■□□□□ 0.69
SF3B2-202ENST00000524475 ABCC12Q96J65 1359 aa19.33■□□□□ 0.69
SF3B2-202ENST00000524475 H0YIN7 160 aa19.33■□□□□ 0.68
SF3B2-202ENST00000524475 TCERG1O14776 1098 aaKnown RBP19.33■□□□□ 0.68
SF3B2-202ENST00000524475 GRIN3BO60391 1043 aa19.33■□□□□ 0.68
SF3B2-202ENST00000524475 GPR162Q16538 588 aa19.33■□□□□ 0.68
SF3B2-202ENST00000524475 ALDH1L2Q3SY69 923 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms