RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 UBR2Q8IWV8 1755 aa24.06■■□□□ 1.44
PVT1-220ENST00000524165 CANXP27824 592 aaKnown RBP24.06■■□□□ 1.44
PVT1-220ENST00000524165 AKAP4Q5JQC9 854 aa24.06■■□□□ 1.44
PVT1-220ENST00000524165 CAPNS2Q96L46 248 aa24.06■■□□□ 1.44
PVT1-220ENST00000524165 TRPM7Q96QT4 1865 aa24.05■■□□□ 1.44
PVT1-220ENST00000524165 SLC39A6Q13433 755 aa24.05■■□□□ 1.44
PVT1-220ENST00000524165 CCDC24Q8N4L8 307 aa24.05■■□□□ 1.44
PVT1-220ENST00000524165 MASTLQ96GX5 879 aa24.05■■□□□ 1.44
PVT1-220ENST00000524165 GPR101Q96P66 508 aaPredicted RBP24.05■■□□□ 1.44
PVT1-220ENST00000524165 DDX21Q9NR30 783 aaKnown RBP eCLIP24.05■■□□□ 1.44
PVT1-220ENST00000524165 CCDC93Q567U6 631 aa24.04■■□□□ 1.44
PVT1-220ENST00000524165 C7orf43Q8WVR3 580 aa24.04■■□□□ 1.44
PVT1-220ENST00000524165 CFAP44Q96MT7 982 aa24.04■■□□□ 1.44
PVT1-220ENST00000524165 LTBP1Q14766 1721 aa24.04■■□□□ 1.44
PVT1-220ENST00000524165 MCOLN1Q9GZU1 580 aa24.03■■□□□ 1.44
PVT1-220ENST00000524165 CASP8AP2Q9UKL3 1982 aa24.03■■□□□ 1.44
PVT1-220ENST00000524165 RNF123Q5XPI4 1314 aa24.03■■□□□ 1.44
PVT1-220ENST00000524165 FKBP4Q02790 459 aaKnown RBP eCLIP24.02■■□□□ 1.44
PVT1-220ENST00000524165 CNBD1Q8NA66 436 aa24.02■■□□□ 1.44
PVT1-220ENST00000524165 LGR6Q9HBX8 967 aa24.02■■□□□ 1.44
PVT1-220ENST00000524165 STARD3NLO95772 234 aa24.01■■□□□ 1.43
PVT1-220ENST00000524165 SULT6B1Q6IMI4 303 aa24.01■■□□□ 1.43
PVT1-220ENST00000524165 CA12O43570 354 aa24■■□□□ 1.43
PVT1-220ENST00000524165 MAP2K2P36507 400 aa24■■□□□ 1.43
PVT1-220ENST00000524165 ST5P78524 1137 aa24■■□□□ 1.43
PVT1-220ENST00000524165 PAXIP1Q6ZW49 1069 aaPredicted RBP24■■□□□ 1.43
PVT1-220ENST00000524165 FZD9O00144 591 aa23.99■■□□□ 1.43
PVT1-220ENST00000524165 NPHP1O15259 732 aa23.99■■□□□ 1.43
PVT1-220ENST00000524165 RNMTO43148 476 aaKnown RBP23.99■■□□□ 1.43
PVT1-220ENST00000524165 CYP4F22Q6NT55 531 aa23.99■■□□□ 1.43
PVT1-220ENST00000524165 GPC2Q8N158 579 aa23.99■■□□□ 1.43
PVT1-220ENST00000524165 SETDB2Q96T68 719 aa23.99■■□□□ 1.43
PVT1-220ENST00000524165 ZNF277Q9NRM2 450 aaPredicted RBP23.98■■□□□ 1.43
PVT1-220ENST00000524165 TSKSQ9UJT2 592 aa23.98■■□□□ 1.43
PVT1-220ENST00000524165 GRM1Q13255 1194 aa23.96■■□□□ 1.43
PVT1-220ENST00000524165 RTKN2Q8IZC4 609 aa23.96■■□□□ 1.43
PVT1-220ENST00000524165 TBC1D2BQ9UPU7 963 aa23.96■■□□□ 1.43
PVT1-220ENST00000524165 TLL2Q9Y6L7 1015 aa23.95■■□□□ 1.42
PVT1-220ENST00000524165 BCORQ6W2J9 1755 aa23.94■■□□□ 1.42
PVT1-220ENST00000524165 NPR1P16066 1061 aa23.94■■□□□ 1.42
PVT1-220ENST00000524165 IL6STP40189 918 aaPredicted RBP23.94■■□□□ 1.42
PVT1-220ENST00000524165 IARSP41252 1262 aaKnown RBP23.93■■□□□ 1.42
PVT1-220ENST00000524165 DGKZQ13574 1117 aa23.93■■□□□ 1.42
PVT1-220ENST00000524165 CST9Q5W186 159 aa23.93■■□□□ 1.42
PVT1-220ENST00000524165 TEX13AQ9BXU3 409 aaPredicted RBP23.92■■□□□ 1.42
PVT1-220ENST00000524165 AOC2O75106 756 aa23.91■■□□□ 1.42
PVT1-220ENST00000524165 CAMTA2O94983 1202 aa23.91■■□□□ 1.42
PVT1-220ENST00000524165 FMR1Q06787 632 aaKnown RBP eCLIP23.91■■□□□ 1.42
PVT1-220ENST00000524165 TTC5Q8N0Z6 440 aa23.91■■□□□ 1.42
PVT1-220ENST00000524165 ZNF330Q9Y3S2 320 aaPredicted RBP23.91■■□□□ 1.42
PVT1-220ENST00000524165 KLRG2A4D1S0 409 aaPredicted RBP23.9■■□□□ 1.42
PVT1-220ENST00000524165 LMOD1P29536 600 aaPredicted RBP23.9■■□□□ 1.42
PVT1-220ENST00000524165 IL13P35225 146 aa23.9■■□□□ 1.42
PVT1-220ENST00000524165 BRPF1P55201 1214 aaPredicted RBP23.9■■□□□ 1.42
PVT1-220ENST00000524165 SYNE4Q8N205 404 aa23.89■■□□□ 1.41
PVT1-220ENST00000524165 JDP2Q8WYK2 163 aa23.89■■□□□ 1.41
PVT1-220ENST00000524165 NPM2Q86SE8 214 aaKnown RBP23.88■■□□□ 1.41
PVT1-220ENST00000524165 HHIPL1Q96JK4 782 aa23.88■■□□□ 1.41
PVT1-220ENST00000524165 HEG1Q9ULI3 1381 aa23.88■■□□□ 1.41
PVT1-220ENST00000524165 EIF6P56537 245 aaKnown RBP23.87■■□□□ 1.41
PVT1-220ENST00000524165 OLFM4Q6UX06 510 aa23.87■■□□□ 1.41
PVT1-220ENST00000524165 USP50Q70EL3 339 aaPredicted RBP23.87■■□□□ 1.41
PVT1-220ENST00000524165 TRAF5O00463 557 aa23.86■■□□□ 1.41
PVT1-220ENST00000524165 PRPF38BQ5VTL8 546 aaKnown RBP23.86■■□□□ 1.41
PVT1-220ENST00000524165 SAPCD2Q86UD0 394 aa23.86■■□□□ 1.41
PVT1-220ENST00000524165 NBPF5PQ86XG9 351 aaPredicted RBP23.86■■□□□ 1.41
PVT1-220ENST00000524165 ZNF496Q96IT1 587 aaPredicted RBP23.86■■□□□ 1.41
PVT1-220ENST00000524165 PSMD1Q99460 953 aa23.86■■□□□ 1.41
PVT1-220ENST00000524165 SCNN1DP51172 638 aa23.85■■□□□ 1.41
PVT1-220ENST00000524165 GJA3Q9Y6H8 435 aa23.85■■□□□ 1.41
PVT1-220ENST00000524165 SNED1Q8TER0 1413 aa23.84■■□□□ 1.41
PVT1-220ENST00000524165 ALDH1B1P30837 517 aa23.84■■□□□ 1.41
PVT1-220ENST00000524165 EPS15P42566 896 aa23.84■■□□□ 1.41
PVT1-220ENST00000524165 CLEC4GQ6UXB4 293 aa23.84■■□□□ 1.41
PVT1-220ENST00000524165 DZIP3Q86Y13 1208 aaKnown RBP23.83■■□□□ 1.41
PVT1-220ENST00000524165 MTHFSDQ2M296 383 aaKnown RBP23.82■■□□□ 1.4
PVT1-220ENST00000524165 ZNF790Q6PG37 636 aa23.82■■□□□ 1.4
PVT1-220ENST00000524165 SIPA1L3O60292 1781 aaPredicted RBP23.82■■□□□ 1.4
PVT1-220ENST00000524165 COL4A5P29400 1685 aa23.82■■□□□ 1.4
PVT1-220ENST00000524165 A1BGP04217 495 aa23.81■■□□□ 1.4
PVT1-220ENST00000524165 MORC1Q86VD1 984 aa23.81■■□□□ 1.4
PVT1-220ENST00000524165 TPTE2Q6XPS3 522 aa23.8■■□□□ 1.4
PVT1-220ENST00000524165 CC2D2BQ6DHV5 1058 aa23.79■■□□□ 1.4
PVT1-220ENST00000524165 CIAPIN1Q6FI81 312 aa23.79■■□□□ 1.4
PVT1-220ENST00000524165 ZNF652Q9Y2D9 606 aa23.79■■□□□ 1.4
PVT1-220ENST00000524165 CELF2O95319 508 aaKnown RBP23.78■■□□□ 1.4
PVT1-220ENST00000524165 SOX10P56693 466 aa23.78■■□□□ 1.4
PVT1-220ENST00000524165 FMNL2Q96PY5 1086 aa23.77■■□□□ 1.4
PVT1-220ENST00000524165 HMOX1P09601 288 aa23.76■■□□□ 1.39
PVT1-220ENST00000524165 NOGQ13253 232 aa23.76■■□□□ 1.39
PVT1-220ENST00000524165 POLR3GLQ9BT43 218 aa23.76■■□□□ 1.39
PVT1-220ENST00000524165 ADARB2Q9NS39 739 aaKnown RBP23.76■■□□□ 1.39
PVT1-220ENST00000524165 RGL2O15211 777 aa23.75■■□□□ 1.39
PVT1-220ENST00000524165 TEFQ10587 303 aa23.75■■□□□ 1.39
PVT1-220ENST00000524165 GRIPAP1Q4V328 841 aa23.75■■□□□ 1.39
PVT1-220ENST00000524165 PANK3Q9H999 370 aa23.75■■□□□ 1.39
PVT1-220ENST00000524165 LARGE2Q8N3Y3 721 aa23.74■■□□□ 1.39
PVT1-220ENST00000524165 GPRC5DQ9NZD1 345 aa23.73■■□□□ 1.39
PVT1-220ENST00000524165 CRY2Q49AN0 593 aa23.72■■□□□ 1.39
PVT1-220ENST00000524165 PGAP2Q9UHJ9 254 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms