RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 MAP3K11Q16584 847 aa12.24□□□□□ -0.45
SPIDR-225ENST00000524141 PPP1R42Q7Z4L9 355 aa12.24□□□□□ -0.45
SPIDR-225ENST00000524141 PDRG1Q9NUG6 133 aa12.24□□□□□ -0.45
SPIDR-225ENST00000524141 CYP46A1Q9Y6A2 500 aa12.24□□□□□ -0.45
SPIDR-225ENST00000524141 TTC21AQ8NDW8 1320 aa12.23□□□□□ -0.45
SPIDR-225ENST00000524141 CCDC83Q8IWF9 413 aa12.23□□□□□ -0.45
SPIDR-225ENST00000524141 FEZ1Q99689 392 aa12.23□□□□□ -0.45
SPIDR-225ENST00000524141 GNAT3A8MTJ3 354 aa12.23□□□□□ -0.45
SPIDR-225ENST00000524141 MAP4K4O95819 1239 aaPredicted RBP12.23□□□□□ -0.45
SPIDR-225ENST00000524141 PDCP20941 246 aa12.23□□□□□ -0.45
SPIDR-225ENST00000524141 TPRNQ4KMQ1 711 aa12.23□□□□□ -0.45
SPIDR-225ENST00000524141 CWC27Q6UX04 472 aaKnown RBP12.23□□□□□ -0.45
SPIDR-225ENST00000524141 SPC24Q8NBT2 197 aa12.23□□□□□ -0.45
SPIDR-225ENST00000524141 NUP62CLQ9H1M0 184 aa12.23□□□□□ -0.45
SPIDR-225ENST00000524141 AP5Z1O43299 807 aa12.22□□□□□ -0.45
SPIDR-225ENST00000524141 ZSWIM6Q9HCJ5 1215 aa12.22□□□□□ -0.45
SPIDR-225ENST00000524141 ZHX1Q9UKY1 873 aaPredicted RBP12.22□□□□□ -0.45
SPIDR-225ENST00000524141 VPS37CA5D8V6 355 aaPredicted RBP12.22□□□□□ -0.45
SPIDR-225ENST00000524141 SRGAP3O43295 1099 aa12.22□□□□□ -0.45
SPIDR-225ENST00000524141 ATP2B3Q16720 1220 aa12.22□□□□□ -0.45
SPIDR-225ENST00000524141 KCNB2Q92953 911 aa12.22□□□□□ -0.45
SPIDR-225ENST00000524141 JAKMIP1Q96N16 626 aaKnown RBP12.22□□□□□ -0.45
SPIDR-225ENST00000524141 CHMP4AQ9BY43 222 aa12.22□□□□□ -0.45
SPIDR-225ENST00000524141 LARGE1O95461 756 aa12.21□□□□□ -0.45
SPIDR-225ENST00000524141 ZKSCAN1P17029 563 aaPredicted RBP12.21□□□□□ -0.45
SPIDR-225ENST00000524141 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.21□□□□□ -0.45
SPIDR-225ENST00000524141 SPG7Q9UQ90 795 aa12.21□□□□□ -0.45
SPIDR-225ENST00000524141 CEP170BQ9Y4F5 1589 aaPredicted RBP12.21□□□□□ -0.45
SPIDR-225ENST00000524141 TYRO3Q06418 890 aa12.21□□□□□ -0.46
SPIDR-225ENST00000524141 GPATCH3Q96I76 525 aa12.21□□□□□ -0.46
SPIDR-225ENST00000524141 NECTIN2Q92692 538 aa12.2□□□□□ -0.46
SPIDR-225ENST00000524141 LARP6Q9BRS8 491 aaKnown RBP12.2□□□□□ -0.46
SPIDR-225ENST00000524141 SCAND2PQ9GZW5 306 aaPredicted RBP12.2□□□□□ -0.46
SPIDR-225ENST00000524141 ROBO2Q9HCK4 1378 aa12.2□□□□□ -0.46
SPIDR-225ENST00000524141 TAF7Q15545 349 aaPredicted RBP12.2□□□□□ -0.46
SPIDR-225ENST00000524141 HDGFL1Q5TGJ6 251 aa12.2□□□□□ -0.46
SPIDR-225ENST00000524141 EYA1Q99502 592 aa12.2□□□□□ -0.46
SPIDR-225ENST00000524141 DDX19AQ9NUU7 478 aaKnown RBP12.2□□□□□ -0.46
SPIDR-225ENST00000524141 MRVI1Q9Y6F6 885 aa12.2□□□□□ -0.46
SPIDR-225ENST00000524141 ADGRL3Q9HAR2 1447 aa12.2□□□□□ -0.46
SPIDR-225ENST00000524141 FAM177BA6PVY3 158 aa12.19□□□□□ -0.46
SPIDR-225ENST00000524141 SMTNL1A8MU46 457 aa12.19□□□□□ -0.46
SPIDR-225ENST00000524141 PTGS1P23219 599 aa12.19□□□□□ -0.46
SPIDR-225ENST00000524141 AMPHP49418 695 aa12.19□□□□□ -0.46
SPIDR-225ENST00000524141 LARP1BQ659C4 914 aaKnown RBP12.19□□□□□ -0.46
SPIDR-225ENST00000524141 TNMDQ9H2S6 317 aa12.19□□□□□ -0.46
SPIDR-225ENST00000524141 PTPRUQ92729 1446 aa12.19□□□□□ -0.46
SPIDR-225ENST00000524141 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.19□□□□□ -0.46
SPIDR-225ENST00000524141 GOLGA6L4A6NEF3 574 aa12.19□□□□□ -0.46
SPIDR-225ENST00000524141 SOX12O15370 315 aa12.19□□□□□ -0.46
SPIDR-225ENST00000524141 CAVIN2O95810 425 aa12.19□□□□□ -0.46
SPIDR-225ENST00000524141 PRPF40BQ6NWY9 871 aaKnown RBP12.19□□□□□ -0.46
SPIDR-225ENST00000524141 TTC6Q86TZ1 520 aa12.19□□□□□ -0.46
SPIDR-225ENST00000524141 OSCARQ8IYS5 282 aa12.19□□□□□ -0.46
SPIDR-225ENST00000524141 PAXBP1Q9Y5B6 917 aa12.19□□□□□ -0.46
SPIDR-225ENST00000524141 NPHP3Q7Z494 1330 aa12.19□□□□□ -0.46
SPIDR-225ENST00000524141 CPA1P15085 419 aa12.18□□□□□ -0.46
SPIDR-225ENST00000524141 PSMA5P28066 241 aa12.18□□□□□ -0.46
SPIDR-225ENST00000524141 ANKRD1Q15327 319 aa12.18□□□□□ -0.46
SPIDR-225ENST00000524141 CLASRPQ8N2M8 674 aaKnown RBP12.18□□□□□ -0.46
SPIDR-225ENST00000524141 HIP1O00291 1037 aa12.18□□□□□ -0.46
SPIDR-225ENST00000524141 ME3Q16798 604 aa12.18□□□□□ -0.46
SPIDR-225ENST00000524141 DRC7Q8IY82 874 aa12.18□□□□□ -0.46
SPIDR-225ENST00000524141 OGFRQ9NZT2 677 aa12.18□□□□□ -0.46
SPIDR-225ENST00000524141 OS9Q13438 667 aaPredicted RBP12.18□□□□□ -0.46
SPIDR-225ENST00000524141 ADCK5Q3MIX3 580 aa12.18□□□□□ -0.46
SPIDR-225ENST00000524141 RBM43Q6ZSC3 357 aaKnown RBP12.18□□□□□ -0.46
SPIDR-225ENST00000524141 ECHDC1Q9NTX5 307 aa12.18□□□□□ -0.46
SPIDR-225ENST00000524141 U2AF2P26368 475 aaKnown RBP eCLIP12.17□□□□□ -0.46
SPIDR-225ENST00000524141 PTH1RQ03431 593 aa12.17□□□□□ -0.46
SPIDR-225ENST00000524141 NCBP1Q09161 790 aaKnown RBP12.17□□□□□ -0.46
SPIDR-225ENST00000524141 NECTIN1Q15223 517 aa12.17□□□□□ -0.46
SPIDR-225ENST00000524141 CCDC186Q7Z3E2 898 aa12.17□□□□□ -0.46
SPIDR-225ENST00000524141 LUZP1Q86V48 1076 aa12.17□□□□□ -0.46
SPIDR-225ENST00000524141 PLA2G4DQ86XP0 818 aa12.17□□□□□ -0.46
SPIDR-225ENST00000524141 ERC1Q8IUD2 1116 aa12.17□□□□□ -0.46
SPIDR-225ENST00000524141 TDRD7Q8NHU6 1098 aaKnown RBP12.17□□□□□ -0.46
SPIDR-225ENST00000524141 EVI5LQ96CN4 794 aa12.17□□□□□ -0.46
SPIDR-225ENST00000524141 CBX8Q9HC52 389 aa12.17□□□□□ -0.46
SPIDR-225ENST00000524141 CGNQ9P2M7 1197 aaKnown RBP12.17□□□□□ -0.46
SPIDR-225ENST00000524141 HOXB7P09629 217 aa12.17□□□□□ -0.46
SPIDR-225ENST00000524141 ANO6Q4KMQ2 910 aa12.17□□□□□ -0.46
SPIDR-225ENST00000524141 TRIM5Q9C035 493 aa12.17□□□□□ -0.46
SPIDR-225ENST00000524141 SPDYE4A6NLX3 237 aa12.16□□□□□ -0.46
SPIDR-225ENST00000524141 LIG1P18858 919 aa12.16□□□□□ -0.46
SPIDR-225ENST00000524141 ZNF75DP51815 510 aa12.16□□□□□ -0.46
SPIDR-225ENST00000524141 ST3GAL1Q11201 340 aa12.16□□□□□ -0.46
SPIDR-225ENST00000524141 MTX1Q13505 466 aa12.16□□□□□ -0.46
SPIDR-225ENST00000524141 RNF20Q5VTR2 975 aa12.16□□□□□ -0.46
SPIDR-225ENST00000524141 SPATA32Q96LK8 384 aa12.16□□□□□ -0.46
SPIDR-225ENST00000524141 CLSTN2Q9H4D0 955 aa12.16□□□□□ -0.46
SPIDR-225ENST00000524141 PHAXQ9H814 394 aaKnown RBP12.16□□□□□ -0.46
SPIDR-225ENST00000524141 DACT1Q9NYF0 836 aa12.16□□□□□ -0.46
SPIDR-225ENST00000524141 HDAC5Q9UQL6 1122 aa12.16□□□□□ -0.46
SPIDR-225ENST00000524141 NBPF7P0C2Y1 421 aaPredicted RBP12.16□□□□□ -0.46
SPIDR-225ENST00000524141 CDC25BP30305 580 aa12.16□□□□□ -0.46
SPIDR-225ENST00000524141 KCNJ4P48050 445 aa12.16□□□□□ -0.46
SPIDR-225ENST00000524141 CAMK4Q16566 473 aa12.16□□□□□ -0.46
SPIDR-225ENST00000524141 ZSCAN25Q6NSZ9 544 aa12.16□□□□□ -0.46
SPIDR-225ENST00000524141 CDC37L1Q7L3B6 337 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms