RNA–Protein interactions for RNA: ENST00000523993.5

FAM49B-228, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-228ENST00000523993 AKAP4Q5JQC9 854 aa8.12□□□□□ -1.11
FAM49B-228ENST00000523993 C1orf141Q5JVX7 400 aa8.12□□□□□ -1.11
FAM49B-228ENST00000523993 ZNF784Q8NCA9 323 aaPredicted RBP8.12□□□□□ -1.11
FAM49B-228ENST00000523993 KIF12Q96FN5 646 aa8.12□□□□□ -1.11
FAM49B-228ENST00000523993 N4BP2Q86UW6 1770 aaPredicted RBP8.12□□□□□ -1.11
FAM49B-228ENST00000523993 GNPATO15228 680 aa8.11□□□□□ -1.11
FAM49B-228ENST00000523993 RPS6KA4O75676 772 aa8.11□□□□□ -1.11
FAM49B-228ENST00000523993 POTEJP0CG39 1038 aa8.11□□□□□ -1.11
FAM49B-228ENST00000523993 YBX3P16989 372 aaKnown RBP eCLIP8.11□□□□□ -1.11
FAM49B-228ENST00000523993 CABP4P57796 275 aa8.11□□□□□ -1.11
FAM49B-228ENST00000523993 GPR162Q16538 588 aa8.11□□□□□ -1.11
FAM49B-228ENST00000523993 NFATC2IPQ8NCF5 419 aa8.11□□□□□ -1.11
FAM49B-228ENST00000523993 KCPQ6ZWJ8 1503 aa8.11□□□□□ -1.11
FAM49B-228ENST00000523993 NRXN2Q9P2S2 1712 aa8.11□□□□□ -1.11
FAM49B-228ENST00000523993 AFDNP55196 1824 aaKnown RBP8.1□□□□□ -1.11
FAM49B-228ENST00000523993 DIAPH1O60610 1272 aaKnown RBP8.1□□□□□ -1.11
FAM49B-228ENST00000523993 TRAPPC3LQ5T215 181 aa8.1□□□□□ -1.11
FAM49B-228ENST00000523993 MSL1Q68DK7 614 aa8.1□□□□□ -1.11
FAM49B-228ENST00000523993 NLGN1Q8N2Q7 840 aa8.1□□□□□ -1.11
FAM49B-228ENST00000523993 ARID3AQ99856 593 aa8.1□□□□□ -1.11
FAM49B-228ENST00000523993 SLC52A2Q9HAB3 445 aa8.1□□□□□ -1.11
FAM49B-228ENST00000523993 RTCBQ9Y3I0 505 aaKnown RBP8.1□□□□□ -1.11
FAM49B-228ENST00000523993 PHF14O94880 888 aa8.09□□□□□ -1.11
FAM49B-228ENST00000523993 ATN1P54259 1190 aaPredicted RBP8.09□□□□□ -1.11
FAM49B-228ENST00000523993 MKRN3Q13064 507 aaKnown RBP8.09□□□□□ -1.11
FAM49B-228ENST00000523993 C10orf71Q711Q0 1435 aa8.09□□□□□ -1.11
FAM49B-228ENST00000523993 DLEC1Q9Y238 1755 aa8.09□□□□□ -1.11
FAM49B-228ENST00000523993 DLG5Q8TDM6 1919 aa8.09□□□□□ -1.11
FAM49B-228ENST00000523993 CEP350Q5VT06 3117 aa8.09□□□□□ -1.11
FAM49B-228ENST00000523993 ADCY9O60503 1353 aa8.09□□□□□ -1.12
FAM49B-228ENST00000523993 SBF1O95248 1867 aa8.09□□□□□ -1.12
FAM49B-228ENST00000523993 RNMTO43148 476 aaKnown RBP8.08□□□□□ -1.12
FAM49B-228ENST00000523993 GYS1P13807 737 aa8.08□□□□□ -1.12
FAM49B-228ENST00000523993 MTHFSDQ2M296 383 aaKnown RBP8.08□□□□□ -1.12
FAM49B-228ENST00000523993 PPP1R15BQ5SWA1 713 aa8.08□□□□□ -1.12
FAM49B-228ENST00000523993 CC2D1BQ5T0F9 858 aaKnown RBP8.08□□□□□ -1.12
FAM49B-228ENST00000523993 SMIM5Q71RC9 77 aa8.08□□□□□ -1.12
FAM49B-228ENST00000523993 C1orf115Q9H7X2 142 aa8.08□□□□□ -1.12
FAM49B-228ENST00000523993 LGR6Q9HBX8 967 aa8.08□□□□□ -1.12
FAM49B-228ENST00000523993 CEMIPQ8WUJ3 1361 aa8.08□□□□□ -1.12
FAM49B-228ENST00000523993 PXDNLA1KZ92 1463 aa8.07□□□□□ -1.12
FAM49B-228ENST00000523993 MMP10P09238 476 aa8.07□□□□□ -1.12
FAM49B-228ENST00000523993 HMOX1P09601 288 aa8.07□□□□□ -1.12
FAM49B-228ENST00000523993 CRKLP46109 303 aaKnown RBP8.07□□□□□ -1.12
FAM49B-228ENST00000523993 TGFB2P61812 414 aa8.07□□□□□ -1.12
FAM49B-228ENST00000523993 LCE2DQ5TA82 110 aaPredicted RBP8.07□□□□□ -1.12
FAM49B-228ENST00000523993 INTS5Q6P9B9 1019 aaKnown RBP8.07□□□□□ -1.12
FAM49B-228ENST00000523993 FAM117AQ9C073 453 aa8.07□□□□□ -1.12
FAM49B-228ENST00000523993 USP42Q9H9J4 1324 aaKnown RBP8.06□□□□□ -1.12
FAM49B-228ENST00000523993 DPYSL4O14531 572 aa8.06□□□□□ -1.12
FAM49B-228ENST00000523993 GPR37O15354 613 aa8.06□□□□□ -1.12
FAM49B-228ENST00000523993 PTCD1O75127 700 aaKnown RBP8.06□□□□□ -1.12
FAM49B-228ENST00000523993 RFC4P35249 363 aa8.06□□□□□ -1.12
FAM49B-228ENST00000523993 SOS1Q07889 1333 aaPredicted RBP8.05□□□□□ -1.12
FAM49B-228ENST00000523993 SCN7AQ01118 1682 aa8.05□□□□□ -1.12
FAM49B-228ENST00000523993 BCORQ6W2J9 1755 aa8.05□□□□□ -1.12
FAM49B-228ENST00000523993 ZNF316A6NFI3 1004 aaPredicted RBP8.05□□□□□ -1.12
FAM49B-228ENST00000523993 SEC24BO95487 1268 aa8.05□□□□□ -1.12
FAM49B-228ENST00000523993 CYP19A1P11511 503 aaPredicted RBP8.05□□□□□ -1.12
FAM49B-228ENST00000523993 TM4SF1P30408 202 aa8.05□□□□□ -1.12
FAM49B-228ENST00000523993 GOLGA2Q08379 1002 aa8.05□□□□□ -1.12
FAM49B-228ENST00000523993 GAS2L2Q8NHY3 880 aa8.05□□□□□ -1.12
FAM49B-228ENST00000523993 CCDC88AQ3V6T2 1871 aa8.04□□□□□ -1.12
FAM49B-228ENST00000523993 ANKRD31Q8N7Z5 1873 aa8.04□□□□□ -1.12
FAM49B-228ENST00000523993 GNAT3A8MTJ3 354 aa8.04□□□□□ -1.12
FAM49B-228ENST00000523993 C1QTNF8P60827 252 aa8.04□□□□□ -1.12
FAM49B-228ENST00000523993 DNAJC10Q8IXB1 793 aa8.04□□□□□ -1.12
FAM49B-228ENST00000523993 IL17REQ8NFR9 667 aa8.04□□□□□ -1.12
FAM49B-228ENST00000523993 CCDC87Q9NVE4 849 aa8.04□□□□□ -1.12
FAM49B-228ENST00000523993 LAMB4A4D0S4 1761 aa8.03□□□□□ -1.12
FAM49B-228ENST00000523993 KDM3BQ7LBC6 1761 aa8.03□□□□□ -1.12
FAM49B-228ENST00000523993 COL15A1P39059 1388 aa8.03□□□□□ -1.12
FAM49B-228ENST00000523993 HEG1Q9ULI3 1381 aa8.03□□□□□ -1.12
FAM49B-228ENST00000523993 FCHSD2O94868 740 aa8.03□□□□□ -1.12
FAM49B-228ENST00000523993 KCNA3P22001 575 aa8.03□□□□□ -1.12
FAM49B-228ENST00000523993 PPP2R1AP30153 589 aa8.03□□□□□ -1.12
FAM49B-228ENST00000523993 TIE1P35590 1138 aa8.03□□□□□ -1.12
FAM49B-228ENST00000523993 SLC39A6Q13433 755 aa8.03□□□□□ -1.12
FAM49B-228ENST00000523993 PDIA6Q15084 440 aa8.03□□□□□ -1.12
FAM49B-228ENST00000523993 ZNF790Q6PG37 636 aa8.03□□□□□ -1.12
FAM49B-228ENST00000523993 CFAP53Q96M91 514 aa8.03□□□□□ -1.12
FAM49B-228ENST00000523993 TEX13AQ9BXU3 409 aaPredicted RBP8.03□□□□□ -1.12
FAM49B-228ENST00000523993 BMP2KQ9NSY1 1161 aaPredicted RBP8.03□□□□□ -1.12
FAM49B-228ENST00000523993 EMILIN3Q9NT22 766 aa8.03□□□□□ -1.12
FAM49B-228ENST00000523993 NARFQ9UHQ1 456 aa8.03□□□□□ -1.12
FAM49B-228ENST00000523993 PARP3Q9Y6F1 533 aa8.03□□□□□ -1.12
FAM49B-228ENST00000523993 DICER1Q9UPY3 1922 aaKnown RBP8.03□□□□□ -1.12
FAM49B-228ENST00000523993 ATP10DQ9P241 1426 aa8.03□□□□□ -1.12
FAM49B-228ENST00000523993 ARFGEF2Q9Y6D5 1785 aa8.02□□□□□ -1.13
FAM49B-228ENST00000523993 SPDYE16A6NNV3 312 aaPredicted RBP8.02□□□□□ -1.13
FAM49B-228ENST00000523993 POLRMTO00411 1230 aaKnown RBP8.02□□□□□ -1.13
FAM49B-228ENST00000523993 U2SURPO15042 1029 aaKnown RBP8.02□□□□□ -1.13
FAM49B-228ENST00000523993 HTATSF1O43719 755 aaKnown RBP8.02□□□□□ -1.13
FAM49B-228ENST00000523993 EIF5P55010 431 aaKnown RBP8.02□□□□□ -1.13
FAM49B-228ENST00000523993 DDR1Q08345 913 aa8.02□□□□□ -1.13
FAM49B-228ENST00000523993 CDAN1Q8IWY9 1227 aa8.02□□□□□ -1.13
FAM49B-228ENST00000523993 PHACTR3Q96KR7 559 aa8.02□□□□□ -1.13
FAM49B-228ENST00000523993 NUDCQ9Y266 331 aa8.02□□□□□ -1.13
FAM49B-228ENST00000523993 FER1L6Q2WGJ9 1857 aa8.01□□□□□ -1.13
FAM49B-228ENST00000523993 A0A0G2JLW4 131 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 790.9 ms