RNA–Protein interactions for RNA: ENST00000523203.5

CSNK1A1-208, Transcript of casein kinase 1 alpha 1, human

TSL 5

Gene CSNK1A1, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1A1-208	ENST00000523203	ST5	P78524	1137 aa		13.65	□□□□□ -0.22
CSNK1A1-208	ENST00000523203	CNKSR1	Q969H4	720 aa		13.65	□□□□□ -0.22
CSNK1A1-208	ENST00000523203	USP16	Q9Y5T5	823 aa		13.65	□□□□□ -0.22
CSNK1A1-208	ENST00000523203	CACNA1S	Q13698	1873 aa		13.65	□□□□□ -0.22
CSNK1A1-208	ENST00000523203	FER1L6	Q2WGJ9	1857 aa		13.65	□□□□□ -0.22
CSNK1A1-208	ENST00000523203	SNRPA1	P09661	255 aa	Known RBP	13.64	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	ERFE	Q4G0M1	354 aa		13.64	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	MCM10	Q7L590	875 aa		13.64	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	COL11A2	P13942	1736 aa	Predicted RBP	13.64	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.64	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	BCOR	Q6W2J9	1755 aa		13.63	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	SLX4	Q8IY92	1834 aa		13.63	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	PIP4K2A	P48426	406 aa	Predicted RBP	13.63	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	STYK1	Q6J9G0	422 aa		13.63	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	JMY	Q8N9B5	988 aa		13.63	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	ZNF652	Q9Y2D9	606 aa		13.63	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	PCNT	O95613	3336 aa		13.63	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	PRAMEF22	A3QJZ6	481 aa		13.62	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	ANP32C	O43423	234 aa		13.62	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	SRGN	P10124	158 aa		13.62	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	SOGA3	Q5TF21	947 aa		13.62	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	CLEC4G	Q6UXB4	293 aa		13.62	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.62	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	MASTL	Q96GX5	879 aa		13.62	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	TAOK3	Q9H2K8	898 aa		13.62	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	HTATSF1	O43719	755 aa	Known RBP	13.61	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	PRPF40B	Q6NWY9	871 aa	Known RBP	13.61	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	LTBP3	Q9NS15	1303 aa		13.61	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	ARFGEF2	Q9Y6D5	1785 aa		13.6	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	DCTN1	Q14203	1278 aa		13.6	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	POTEC	B2RU33	542 aa		13.59	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	NEFM	P07197	916 aa		13.59	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	TAF7	Q15545	349 aa	Predicted RBP	13.59	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	DIEXF	Q68CQ4	756 aa	Known RBP	13.59	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	TPTE2	Q6XPS3	522 aa		13.59	□□□□□ -0.23
CSNK1A1-208	ENST00000523203	NPR1	P16066	1061 aa		13.58	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	DLG5	Q8TDM6	1919 aa		13.57	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	FAM177B	A6PVY3	158 aa		13.57	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	NBPF26	B4DH59	902 aa		13.57	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	RGL2	O15211	777 aa		13.57	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	DDN	O94850	711 aa	Predicted RBP	13.57	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	CCDC184	Q52MB2	194 aa		13.57	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	CCDC93	Q567U6	631 aa		13.57	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	NBPF10	Q6P3W6	841 aa	Known RBP	13.57	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	NBPF15	Q8N660	670 aa		13.57	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	GTF2E1	P29083	439 aa	Predicted RBP	13.56	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	MIS18A	Q9NYP9	233 aa		13.56	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	KLRG2	A4D1S0	409 aa	Predicted RBP	13.55	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.55	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	CHADL	Q6NUI6	762 aa		13.55	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	PNISR	Q8TF01	805 aa	Known RBP	13.55	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	C7orf43	Q8WVR3	580 aa		13.55	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	LAMB4	A4D0S4	1761 aa		13.54	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	IQCA1L	A6NCM1	817 aa		13.54	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	ALDH1B1	P30837	517 aa		13.54	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	HLF	Q16534	295 aa		13.54	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	RTKN2	Q8IZC4	609 aa		13.54	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	NGEF	Q8N5V2	710 aa		13.54	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	SCN4A	P35499	1836 aa		13.54	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	NUP98	P52948	1817 aa		13.54	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	NYX	Q9GZU5	481 aa		13.53	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.53	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	RRP7A	Q9Y3A4	280 aa	Known RBP	13.53	□□□□□ -0.24
CSNK1A1-208	ENST00000523203	ERVV-1	B6SEH8	477 aa		13.52	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	POTEI	P0CG38	1075 aa		13.52	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	POTEJ	P0CG39	1038 aa		13.52	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	KIF6	Q6ZMV9	814 aa		13.52	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.52	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	PNN	Q9H307	717 aa	Known RBP	13.52	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	CREBZF	Q9NS37	354 aa		13.52	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	KDM3B	Q7LBC6	1761 aa		13.52	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	HSPA1A	P0DMV8	641 aa	Known RBP	13.51	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	HSPA1B	P0DMV9	641 aa	Known RBP	13.51	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	EIF4A1	P60842	406 aa	Known RBP	13.51	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	NFE2L2	Q16236	605 aa		13.51	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	OLFM4	Q6UX06	510 aa		13.51	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	LDHD	Q86WU2	507 aa		13.51	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	TNS4	Q8IZW8	715 aa		13.51	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	SYNE4	Q8N205	404 aa		13.51	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.51	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	MAP3K15	Q6ZN16	1313 aa		13.5	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	MAPK8IP3	Q9UPT6	1336 aa		13.5	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	NUTM1	Q86Y26	1132 aa		13.5	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	PLEKHF1	Q96S99	279 aa		13.5	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	MRS2	Q9HD23	443 aa		13.5	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	ZNF541	Q9H0D2	1346 aa		13.49	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	MYL6B	P14649	208 aa		13.49	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	IARS	P41252	1262 aa	Known RBP	13.49	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	EAPP	Q56P03	285 aa	Predicted RBP	13.49	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	TTLL7	Q6ZT98	887 aa		13.49	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	MIER1	Q8N108	512 aa		13.49	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	RPGR	Q92834	1020 aa	Known RBP	13.49	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	THUMPD2	Q9BTF0	503 aa	Known RBP	13.49	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	MKRN1	Q9UHC7	482 aa	Known RBP	13.49	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	HACL1	Q9UJ83	578 aa		13.49	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	CLEC11A	Q9Y240	323 aa		13.49	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	GPT	P24298	496 aa		13.48	□□□□□ -0.25
CSNK1A1-208	ENST00000523203	WDR43	Q15061	677 aa	Known RBP eCLIP	13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms