RNA–Protein interactions for RNA: ENST00000521550.5

SPIDR-214, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,849 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-214ENST00000521550 PDGFDQ9GZP0 370 aaPredicted RBP17.29■□□□□ 0.36
SPIDR-214ENST00000521550 CHMP5Q9NZZ3 219 aa17.29■□□□□ 0.36
SPIDR-214ENST00000521550 PAPPAQ13219 1627 aa17.29■□□□□ 0.36
SPIDR-214ENST00000521550 GSPT1P15170 499 aaKnown RBP17.28■□□□□ 0.36
SPIDR-214ENST00000521550 SLC27A3Q5K4L6 730 aa17.28■□□□□ 0.36
SPIDR-214ENST00000521550 LRRC4BQ9NT99 713 aa17.28■□□□□ 0.36
SPIDR-214ENST00000521550 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.28■□□□□ 0.367e-7■■■■□ 21.8
SPIDR-214ENST00000521550 PPP1R1BQ9UD71 204 aaPredicted RBP17.28■□□□□ 0.36
SPIDR-214ENST00000521550 LY75O60449 1722 aa17.28■□□□□ 0.36
SPIDR-214ENST00000521550 RAB11FIP3O75154 756 aa17.28■□□□□ 0.36
SPIDR-214ENST00000521550 REC8O95072 547 aa17.28■□□□□ 0.36
SPIDR-214ENST00000521550 DNAAF4Q8WXU2 420 aa17.28■□□□□ 0.36
SPIDR-214ENST00000521550 HSP90AB1P08238 724 aaKnown RBP17.27■□□□□ 0.36
SPIDR-214ENST00000521550 ANTXR1Q9H6X2 564 aa17.27■□□□□ 0.36
SPIDR-214ENST00000521550 CYP27B1O15528 508 aa17.26■□□□□ 0.35
SPIDR-214ENST00000521550 SMARCA5O60264 1052 aaPredicted RBP17.26■□□□□ 0.35
SPIDR-214ENST00000521550 HSP90AB4PQ58FF6 505 aa17.26■□□□□ 0.35
SPIDR-214ENST00000521550 C16orf71Q8IYS4 520 aaPredicted RBP17.26■□□□□ 0.35
SPIDR-214ENST00000521550 BCL11AQ9H165 835 aa17.26■□□□□ 0.35
SPIDR-214ENST00000521550 CHPF2Q9P2E5 772 aa17.26■□□□□ 0.35
SPIDR-214ENST00000521550 LRRFIP2Q9Y608 721 aaKnown RBP17.26■□□□□ 0.35
SPIDR-214ENST00000521550 ZBTB7AO95365 584 aa17.26■□□□□ 0.35
SPIDR-214ENST00000521550 DDX58O95786 925 aaKnown RBP17.26■□□□□ 0.35
SPIDR-214ENST00000521550 USP44Q9H0E7 712 aa17.26■□□□□ 0.35
SPIDR-214ENST00000521550 PHAXQ9H814 394 aaKnown RBP17.26■□□□□ 0.35
SPIDR-214ENST00000521550 HYPKQ9NX55 129 aa17.26■□□□□ 0.35
SPIDR-214ENST00000521550 FRAT2O75474 233 aaPredicted RBP17.25■□□□□ 0.35
SPIDR-214ENST00000521550 SDSP20132 328 aa17.25■□□□□ 0.35
SPIDR-214ENST00000521550 GSE1Q14687 1217 aa17.25■□□□□ 0.35
SPIDR-214ENST00000521550 ITGB4P16144 1822 aa17.25■□□□□ 0.35
SPIDR-214ENST00000521550 IBTKQ9P2D0 1353 aaPredicted RBP17.25■□□□□ 0.35
SPIDR-214ENST00000521550 HSP90AA1P07900 732 aaKnown RBP17.24■□□□□ 0.35
SPIDR-214ENST00000521550 PDE1AP54750 535 aa17.24■□□□□ 0.35
SPIDR-214ENST00000521550 RABEP1Q15276 862 aa17.24■□□□□ 0.35
SPIDR-214ENST00000521550 AOX1Q06278 1338 aa17.24■□□□□ 0.35
SPIDR-214ENST00000521550 ALDH1L1O75891 902 aa17.24■□□□□ 0.35
SPIDR-214ENST00000521550 ZNF827Q17R98 1081 aa17.24■□□□□ 0.35
SPIDR-214ENST00000521550 CIZ1Q9ULV3 898 aaPredicted RBP17.24■□□□□ 0.35
SPIDR-214ENST00000521550 EXOC6BQ9Y2D4 811 aa17.24■□□□□ 0.35
SPIDR-214ENST00000521550 PI4KAP2A4QPH2 592 aa17.23■□□□□ 0.35
SPIDR-214ENST00000521550 GIGYF1O75420 1035 aaPredicted RBP17.23■□□□□ 0.35
SPIDR-214ENST00000521550 KCNQ4P56696 695 aa17.23■□□□□ 0.35
SPIDR-214ENST00000521550 PI4KAP1Q8N8J0 262 aa17.23■□□□□ 0.35
SPIDR-214ENST00000521550 SSH3Q8TE77 659 aa17.23■□□□□ 0.35
SPIDR-214ENST00000521550 ATF5Q9Y2D1 282 aaPredicted RBP17.23■□□□□ 0.35
SPIDR-214ENST00000521550 TOGARAM1Q9Y4F4 1720 aa17.23■□□□□ 0.35
SPIDR-214ENST00000521550 MX1P20591 662 aa17.22■□□□□ 0.35
SPIDR-214ENST00000521550 IFNL2Q8IZJ0 200 aa17.22■□□□□ 0.35
SPIDR-214ENST00000521550 MTFR1LQ9H019 292 aa17.22■□□□□ 0.35
SPIDR-214ENST00000521550 CCNL1Q9UK58 526 aaPredicted RBP17.22■□□□□ 0.35
SPIDR-214ENST00000521550 QSER1Q2KHR3 1735 aa17.22■□□□□ 0.35
SPIDR-214ENST00000521550 ERC2O15083 957 aa17.21■□□□□ 0.35
SPIDR-214ENST00000521550 BEND3Q5T5X7 828 aa17.21■□□□□ 0.35
SPIDR-214ENST00000521550 KSR2Q6VAB6 950 aa17.21■□□□□ 0.35
SPIDR-214ENST00000521550 AKT1S1Q96B36 256 aa17.21■□□□□ 0.35
SPIDR-214ENST00000521550 PNMA6EA0A0J9YXQ4 647 aa17.21■□□□□ 0.35
SPIDR-214ENST00000521550 KCNQ3O43525 872 aa17.21■□□□□ 0.35
SPIDR-214ENST00000521550 NKX1-1Q15270 411 aaPredicted RBP17.21■□□□□ 0.35
SPIDR-214ENST00000521550 OTUD7AQ8TE49 926 aaPredicted RBP17.21■□□□□ 0.35
SPIDR-214ENST00000521550 HEG1Q9ULI3 1381 aa17.21■□□□□ 0.34
SPIDR-214ENST00000521550 K7ELQ4 463 aaPredicted RBP17.2■□□□□ 0.34
SPIDR-214ENST00000521550 PTGER2P43116 358 aa17.2■□□□□ 0.34
SPIDR-214ENST00000521550 STAP2Q9UGK3 403 aa17.2■□□□□ 0.34
SPIDR-214ENST00000521550 TUBGCP6Q96RT7 1819 aa17.2■□□□□ 0.34
SPIDR-214ENST00000521550 MCCP23508 829 aa17.19■□□□□ 0.34
SPIDR-214ENST00000521550 PPP1R42Q7Z4L9 355 aa17.19■□□□□ 0.34
SPIDR-214ENST00000521550 SPRYD3Q8NCJ5 442 aa17.19■□□□□ 0.34
SPIDR-214ENST00000521550 KIF1BPQ96EK5 621 aa17.19■□□□□ 0.34
SPIDR-214ENST00000521550 USP26Q9BXU7 913 aa17.19■□□□□ 0.34
SPIDR-214ENST00000521550 SLC52A2Q9HAB3 445 aa17.19■□□□□ 0.34
SPIDR-214ENST00000521550 DDX21Q9NR30 783 aaKnown RBP eCLIP17.19■□□□□ 0.34
SPIDR-214ENST00000521550 C9orf78Q9NZ63 289 aaPredicted RBP17.19■□□□□ 0.34
SPIDR-214ENST00000521550 TFCP2L1Q9NZI6 479 aa17.19■□□□□ 0.34
SPIDR-214ENST00000521550 ADAMTS7Q9UKP4 1686 aa17.19■□□□□ 0.34
SPIDR-214ENST00000521550 SRGAP3O43295 1099 aa17.19■□□□□ 0.34
SPIDR-214ENST00000521550 SURF6O75683 361 aaKnown RBP17.19■□□□□ 0.34
SPIDR-214ENST00000521550 POLA2Q14181 598 aa17.19■□□□□ 0.34
SPIDR-214ENST00000521550 IL27Q8NEV9 243 aa17.19■□□□□ 0.34
SPIDR-214ENST00000521550 DCAF5Q96JK2 942 aa17.19■□□□□ 0.34
SPIDR-214ENST00000521550 PALLDQ8WX93 1383 aa17.18■□□□□ 0.34
SPIDR-214ENST00000521550 ST18O60284 1047 aa17.18■□□□□ 0.34
SPIDR-214ENST00000521550 PHKG2P15735 406 aa17.18■□□□□ 0.34
SPIDR-214ENST00000521550 PTMSP20962 102 aa17.18■□□□□ 0.34
SPIDR-214ENST00000521550 SIPA1L3O60292 1781 aaPredicted RBP17.17■□□□□ 0.34
SPIDR-214ENST00000521550 ZNF790Q6PG37 636 aa17.17■□□□□ 0.34
SPIDR-214ENST00000521550 ERC1Q8IUD2 1116 aa17.17■□□□□ 0.34
SPIDR-214ENST00000521550 TTC5Q8N0Z6 440 aa17.17■□□□□ 0.34
SPIDR-214ENST00000521550 KIF2CQ99661 725 aa17.17■□□□□ 0.34
SPIDR-214ENST00000521550 MAP3K2Q9Y2U5 619 aa17.17■□□□□ 0.34
SPIDR-214ENST00000521550 C5P01031 1676 aa17.17■□□□□ 0.34
SPIDR-214ENST00000521550 TAF1LQ8IZX4 1826 aa17.17■□□□□ 0.34
SPIDR-214ENST00000521550 HMGB2P26583 209 aaKnown RBP17.17■□□□□ 0.34
SPIDR-214ENST00000521550 PIGBQ92521 554 aa17.17■□□□□ 0.34
SPIDR-214ENST00000521550 SMARCC1Q92922 1105 aaPredicted RBP17.17■□□□□ 0.34
SPIDR-214ENST00000521550 ADCY9O60503 1353 aa17.16■□□□□ 0.34
SPIDR-214ENST00000521550 DDX11L8A8MPP1 907 aa17.16■□□□□ 0.34
SPIDR-214ENST00000521550 TRIM6-TRIM34B2RNG4 842 aa17.16■□□□□ 0.34
SPIDR-214ENST00000521550 NEXNQ0ZGT2 675 aa17.16■□□□□ 0.34
SPIDR-214ENST00000521550 LINS1Q8NG48 757 aa17.16■□□□□ 0.34
SPIDR-214ENST00000521550 SLC16A10Q8TF71 515 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms