RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 RRP7AQ9Y3A4 280 aaKnown RBP34.08■■■■□ 3.05
LAPTM4B-203ENST00000521545 LAMB4A4D0S4 1761 aa34.08■■■■□ 3.05
LAPTM4B-203ENST00000521545 NGEFQ8N5V2 710 aa34.07■■■■□ 3.04
LAPTM4B-203ENST00000521545 ANKRD31Q8N7Z5 1873 aa34.07■■■■□ 3.04
LAPTM4B-203ENST00000521545 RASSF7Q02833 373 aa34.06■■■■□ 3.04
LAPTM4B-203ENST00000521545 TPTE2Q6XPS3 522 aa34.05■■■■□ 3.04
LAPTM4B-203ENST00000521545 CCDC146Q8IYE0 955 aa34.05■■■■□ 3.04
LAPTM4B-203ENST00000521545 LMNB1P20700 586 aa34.04■■■■□ 3.04
LAPTM4B-203ENST00000521545 CNKSR1Q969H4 720 aa34.04■■■■□ 3.04
LAPTM4B-203ENST00000521545 BABAM1Q9NWV8 329 aa34.04■■■■□ 3.04
LAPTM4B-203ENST00000521545 NEUROD2Q15784 382 aa34.03■■■■□ 3.04
LAPTM4B-203ENST00000521545 HLFQ16534 295 aa34.03■■■■□ 3.04
LAPTM4B-203ENST00000521545 RUNDC1Q96C34 613 aa34.03■■■■□ 3.04
LAPTM4B-203ENST00000521545 KDM2BQ8NHM5 1336 aa34.03■■■■□ 3.04
LAPTM4B-203ENST00000521545 MYL6BP14649 208 aa34.02■■■■□ 3.04
LAPTM4B-203ENST00000521545 STYK1Q6J9G0 422 aa34.02■■■■□ 3.04
LAPTM4B-203ENST00000521545 KIF6Q6ZMV9 814 aa34.02■■■■□ 3.04
LAPTM4B-203ENST00000521545 PRKRIP1Q9H875 184 aaPredicted RBP34.02■■■■□ 3.04
LAPTM4B-203ENST00000521545 NMRK2Q9NPI5 230 aa34.02■■■■□ 3.04
LAPTM4B-203ENST00000521545 ZNF219Q9P2Y4 722 aaPredicted RBP34.02■■■■□ 3.04
LAPTM4B-203ENST00000521545 SBF1O95248 1867 aa34.01■■■■□ 3.04
LAPTM4B-203ENST00000521545 ERVV-1B6SEH8 477 aa34.01■■■■□ 3.03
LAPTM4B-203ENST00000521545 SRGNP10124 158 aa34.01■■■■□ 3.03
LAPTM4B-203ENST00000521545 MASTLQ96GX5 879 aa34.01■■■■□ 3.03
LAPTM4B-203ENST00000521545 FAM177BA6PVY3 158 aa34■■■■□ 3.03
LAPTM4B-203ENST00000521545 C21orf2O43822 256 aa34■■■■□ 3.03
LAPTM4B-203ENST00000521545 GTF2E1P29083 439 aaPredicted RBP33.99■■■■□ 3.03
LAPTM4B-203ENST00000521545 ERBB4Q15303 1308 aa33.99■■■■□ 3.03
LAPTM4B-203ENST00000521545 ZC3H4Q9UPT8 1303 aaKnown RBP33.99■■■■□ 3.03
LAPTM4B-203ENST00000521545 TOMM70O94826 608 aa33.98■■■■□ 3.03
LAPTM4B-203ENST00000521545 ADAMTS8Q9UP79 889 aa33.98■■■■□ 3.03
LAPTM4B-203ENST00000521545 MAP3K15Q6ZN16 1313 aa33.98■■■■□ 3.03
LAPTM4B-203ENST00000521545 COL11A2P13942 1736 aaPredicted RBP33.97■■■■□ 3.03
LAPTM4B-203ENST00000521545 NFKBIEO00221 500 aa33.96■■■■□ 3.03
LAPTM4B-203ENST00000521545 HSPA6P17066 643 aa33.96■■■■□ 3.03
LAPTM4B-203ENST00000521545 TTLL7Q6ZT98 887 aa33.96■■■■□ 3.03
LAPTM4B-203ENST00000521545 C16orf71Q8IYS4 520 aaPredicted RBP33.96■■■■□ 3.03
LAPTM4B-203ENST00000521545 EIF2S2P20042 333 aaKnown RBP33.95■■■■□ 3.03
LAPTM4B-203ENST00000521545 PRPF40BQ6NWY9 871 aaKnown RBP33.95■■■■□ 3.03
LAPTM4B-203ENST00000521545 NYXQ9GZU5 481 aa33.95■■■■□ 3.03
LAPTM4B-203ENST00000521545 NPR1P16066 1061 aa33.94■■■■□ 3.02
LAPTM4B-203ENST00000521545 SOGA3Q5TF21 947 aa33.94■■■■□ 3.02
LAPTM4B-203ENST00000521545 PRELPP51888 382 aa33.93■■■■□ 3.02
LAPTM4B-203ENST00000521545 ZBTB3Q9H5J0 574 aa33.93■■■■□ 3.02
LAPTM4B-203ENST00000521545 LAS1LQ9Y4W2 734 aaKnown RBP33.92■■■■□ 3.02
LAPTM4B-203ENST00000521545 KLRG2A4D1S0 409 aaPredicted RBP33.91■■■■□ 3.02
LAPTM4B-203ENST00000521545 ZEB1P37275 1124 aaPredicted RBP33.91■■■■□ 3.02
LAPTM4B-203ENST00000521545 RRAGCQ9HB90 399 aa33.91■■■■□ 3.02
LAPTM4B-203ENST00000521545 TRIM35Q9UPQ4 493 aa33.9■■■■□ 3.02
LAPTM4B-203ENST00000521545 CHL1O00533 1208 aa33.89■■■■□ 3.02
LAPTM4B-203ENST00000521545 GPTP24298 496 aa33.88■■■■□ 3.01
LAPTM4B-203ENST00000521545 TAOK3Q9H2K8 898 aa33.88■■■■□ 3.01
LAPTM4B-203ENST00000521545 NUP98P52948 1817 aa33.88■■■■□ 3.01
LAPTM4B-203ENST00000521545 SLX4Q8IY92 1834 aa33.88■■■■□ 3.01
LAPTM4B-203ENST00000521545 CCDC88AQ3V6T2 1871 aa33.87■■■■□ 3.01
LAPTM4B-203ENST00000521545 GLTPD2A6NH11 291 aa33.87■■■■□ 3.01
LAPTM4B-203ENST00000521545 GIGYF2Q6Y7W6 1299 aaKnown RBP33.87■■■■□ 3.01
LAPTM4B-203ENST00000521545 RBM46Q8TBY0 533 aaKnown RBP33.87■■■■□ 3.01
LAPTM4B-203ENST00000521545 LTBP3Q9NS15 1303 aa33.86■■■■□ 3.01
LAPTM4B-203ENST00000521545 PDIA6Q15084 440 aa33.86■■■■□ 3.01
LAPTM4B-203ENST00000521545 ERFEQ4G0M1 354 aa33.86■■■■□ 3.01
LAPTM4B-203ENST00000521545 CACNA1SQ13698 1873 aa33.85■■■■□ 3.01
LAPTM4B-203ENST00000521545 ALDH1B1P30837 517 aa33.85■■■■□ 3.01
LAPTM4B-203ENST00000521545 DPY19L2Q6NUT2 758 aa33.85■■■■□ 3.01
LAPTM4B-203ENST00000521545 NUTM1Q86Y26 1132 aa33.85■■■■□ 3.01
LAPTM4B-203ENST00000521545 NECTIN2Q92692 538 aa33.85■■■■□ 3.01
LAPTM4B-203ENST00000521545 FER1L6Q2WGJ9 1857 aa33.84■■■■□ 3.01
LAPTM4B-203ENST00000521545 CCDC93Q567U6 631 aa33.83■■■■□ 3.01
LAPTM4B-203ENST00000521545 ZNF34Q8IZ26 560 aa33.83■■■■□ 3.01
LAPTM4B-203ENST00000521545 ARFGEF2Q9Y6D5 1785 aa33.83■■■■□ 3.01
LAPTM4B-203ENST00000521545 ANXA1P04083 346 aa33.82■■■■□ 3
LAPTM4B-203ENST00000521545 SUSD4Q5VX71 490 aa33.82■■■■□ 3
LAPTM4B-203ENST00000521545 PPP1R42Q7Z4L9 355 aa33.82■■■■□ 3
LAPTM4B-203ENST00000521545 C7orf43Q8WVR3 580 aa33.82■■■■□ 3
LAPTM4B-203ENST00000521545 TNRC6CQ9HCJ0 1690 aaKnown RBP33.82■■■■□ 3
LAPTM4B-203ENST00000521545 UBN2Q6ZU65 1347 aa33.81■■■■□ 3
LAPTM4B-203ENST00000521545 PROSER3Q2NL68 480 aa33.81■■■■□ 3
LAPTM4B-203ENST00000521545 LRP10Q7Z4F1 713 aa33.81■■■■□ 3
LAPTM4B-203ENST00000521545 IBTKQ9P2D0 1353 aaPredicted RBP33.81■■■■□ 3
LAPTM4B-203ENST00000521545 VEGFAP15692 232 aaPredicted RBP33.8■■■■□ 3
LAPTM4B-203ENST00000521545 APLP1P51693 650 aa33.8■■■■□ 3
LAPTM4B-203ENST00000521545 PARP10Q53GL7 1025 aa33.8■■■■□ 3
LAPTM4B-203ENST00000521545 CEP350Q5VT06 3117 aa33.8■■■■□ 3
LAPTM4B-203ENST00000521545 TIAM2Q8IVF5 1701 aa33.79■■■■□ 3
LAPTM4B-203ENST00000521545 FSTL1Q12841 308 aa33.79■■■■□ 3
LAPTM4B-203ENST00000521545 ABCC12Q96J65 1359 aa33.78■■■■□ 3
LAPTM4B-203ENST00000521545 AIMP1Q12904 312 aaKnown RBP33.78■■■■□ 3
LAPTM4B-203ENST00000521545 KRT24Q2M2I5 525 aa33.78■■■■□ 3
LAPTM4B-203ENST00000521545 COPS6Q7L5N1 327 aa33.78■■■■□ 3
LAPTM4B-203ENST00000521545 CFAP44Q96MT7 982 aa33.78■■■■□ 3
LAPTM4B-203ENST00000521545 DDX21Q9NR30 783 aaKnown RBP eCLIP33.78■■■■□ 3
LAPTM4B-203ENST00000521545 APAF1O14727 1248 aa33.77■■■■□ 3
LAPTM4B-203ENST00000521545 CRY2Q49AN0 593 aa33.77■■■■□ 3
LAPTM4B-203ENST00000521545 RTKN2Q8IZC4 609 aa33.77■■■■□ 3
LAPTM4B-203ENST00000521545 RPGRQ92834 1020 aaKnown RBP33.77■■■■□ 3
LAPTM4B-203ENST00000521545 XAGE3Q8WTP9 111 aa33.76■■■□□ 2.99
LAPTM4B-203ENST00000521545 DICER1Q9UPY3 1922 aaKnown RBP33.75■■■□□ 2.99
LAPTM4B-203ENST00000521545 NTSR2O95665 410 aa33.75■■■□□ 2.99
LAPTM4B-203ENST00000521545 HOXB7P09629 217 aa33.75■■■□□ 2.99
LAPTM4B-203ENST00000521545 HSP90AB3PQ58FF7 597 aa33.75■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms