RNA–Protein interactions for RNA: ENST00000521434.5

MRPS28-207, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5 BASIC

Gene MRPS28, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-207ENST00000521434 A0A087WZG4 1122 aa12.14□□□□□ -0.47
MRPS28-207ENST00000521434 RNMTO43148 476 aaKnown RBP12.14□□□□□ -0.47
MRPS28-207ENST00000521434 EIF5P55010 431 aaKnown RBP12.14□□□□□ -0.47
MRPS28-207ENST00000521434 FAM161AQ3B820 660 aa12.14□□□□□ -0.47
MRPS28-207ENST00000521434 TBC1D9BQ66K14 1250 aa12.14□□□□□ -0.47
MRPS28-207ENST00000521434 CNKSR1Q969H4 720 aa12.14□□□□□ -0.47
MRPS28-207ENST00000521434 L3MBTL3Q96JM7 780 aaPredicted RBP12.14□□□□□ -0.47
MRPS28-207ENST00000521434 POLR3GLQ9BT43 218 aa12.14□□□□□ -0.47
MRPS28-207ENST00000521434 TAF1DQ9H5J8 278 aaPredicted RBP12.14□□□□□ -0.47
MRPS28-207ENST00000521434 STARD3NLO95772 234 aa12.13□□□□□ -0.47
MRPS28-207ENST00000521434 ITGBL1O95965 494 aaPredicted RBP12.13□□□□□ -0.47
MRPS28-207ENST00000521434 IL13P35225 146 aa12.13□□□□□ -0.47
MRPS28-207ENST00000521434 SOGA3Q5TF21 947 aa12.13□□□□□ -0.47
MRPS28-207ENST00000521434 PRR5LQ6MZQ0 368 aa12.13□□□□□ -0.47
MRPS28-207ENST00000521434 ABHD8Q96I13 439 aa12.13□□□□□ -0.47
MRPS28-207ENST00000521434 ADAMTSL1Q8N6G6 1762 aa12.13□□□□□ -0.47
MRPS28-207ENST00000521434 STYK1Q6J9G0 422 aa12.12□□□□□ -0.47
MRPS28-207ENST00000521434 PRPF40BQ6NWY9 871 aaKnown RBP12.12□□□□□ -0.47
MRPS28-207ENST00000521434 MORC1Q86VD1 984 aa12.12□□□□□ -0.47
MRPS28-207ENST00000521434 CCDC24Q8N4L8 307 aa12.12□□□□□ -0.47
MRPS28-207ENST00000521434 SRGNP10124 158 aa12.11□□□□□ -0.47
MRPS28-207ENST00000521434 HSPA8P11142 646 aaKnown RBP12.11□□□□□ -0.47
MRPS28-207ENST00000521434 DEFB115Q30KQ5 88 aa12.11□□□□□ -0.47
MRPS28-207ENST00000521434 CNBD1Q8NA66 436 aa12.11□□□□□ -0.47
MRPS28-207ENST00000521434 PANK3Q9H999 370 aa12.11□□□□□ -0.47
MRPS28-207ENST00000521434 TNRC18O15417 2968 aaPredicted RBP12.11□□□□□ -0.47
MRPS28-207ENST00000521434 RASSF10A6NK89 507 aa12.1□□□□□ -0.47
MRPS28-207ENST00000521434 NPHP1O15259 732 aa12.1□□□□□ -0.47
MRPS28-207ENST00000521434 MAP2K1Q02750 393 aaPredicted RBP12.1□□□□□ -0.47
MRPS28-207ENST00000521434 EAPPQ56P03 285 aaPredicted RBP12.1□□□□□ -0.47
MRPS28-207ENST00000521434 TTC5Q8N0Z6 440 aa12.1□□□□□ -0.47
MRPS28-207ENST00000521434 MASTLQ96GX5 879 aa12.1□□□□□ -0.47
MRPS28-207ENST00000521434 SETDB2Q96T68 719 aa12.1□□□□□ -0.47
MRPS28-207ENST00000521434 TBC1D2BQ9UPU7 963 aa12.1□□□□□ -0.47
MRPS28-207ENST00000521434 CLEC11AQ9Y240 323 aa12.1□□□□□ -0.47
MRPS28-207ENST00000521434 BCORQ6W2J9 1755 aa12.1□□□□□ -0.47
MRPS28-207ENST00000521434 ST5P78524 1137 aa12.09□□□□□ -0.47
MRPS28-207ENST00000521434 PCDH10Q9P2E7 1040 aa12.09□□□□□ -0.47
MRPS28-207ENST00000521434 HACL1Q9UJ83 578 aa12.09□□□□□ -0.47
MRPS28-207ENST00000521434 SSUH2Q9Y2M2 353 aa12.09□□□□□ -0.47
MRPS28-207ENST00000521434 WDR33Q9C0J8 1336 aaKnown RBP12.09□□□□□ -0.47
MRPS28-207ENST00000521434 TRPM7Q96QT4 1865 aa12.08□□□□□ -0.48
MRPS28-207ENST00000521434 EPHX2P34913 555 aa12.08□□□□□ -0.48
MRPS28-207ENST00000521434 IL6STP40189 918 aaPredicted RBP12.08□□□□□ -0.48
MRPS28-207ENST00000521434 MLLT1Q03111 559 aaPredicted RBP12.08□□□□□ -0.48
MRPS28-207ENST00000521434 CCDC93Q567U6 631 aa12.08□□□□□ -0.48
MRPS28-207ENST00000521434 PNMA8AQ86V59 439 aaPredicted RBP12.08□□□□□ -0.48
MRPS28-207ENST00000521434 CNTROBQ8N137 903 aa12.08□□□□□ -0.48
MRPS28-207ENST00000521434 C7orf43Q8WVR3 580 aa12.08□□□□□ -0.48
MRPS28-207ENST00000521434 TEX13AQ9BXU3 409 aaPredicted RBP12.08□□□□□ -0.48
MRPS28-207ENST00000521434 ZNF330Q9Y3S2 320 aaPredicted RBP12.08□□□□□ -0.48
MRPS28-207ENST00000521434 ZNF541Q9H0D2 1346 aa12.08□□□□□ -0.48
MRPS28-207ENST00000521434 PDE4DIPQ5VU43 2346 aa12.08□□□□□ -0.48
MRPS28-207ENST00000521434 SIPA1L3O60292 1781 aaPredicted RBP12.07□□□□□ -0.48
MRPS28-207ENST00000521434 HEG1Q9ULI3 1381 aa12.07□□□□□ -0.48
MRPS28-207ENST00000521434 HMOX1P09601 288 aa12.07□□□□□ -0.48
MRPS28-207ENST00000521434 RGS19P49795 217 aa12.07□□□□□ -0.48
MRPS28-207ENST00000521434 FKBP4Q02790 459 aaKnown RBP eCLIP12.07□□□□□ -0.48
MRPS28-207ENST00000521434 MTHFSDQ2M296 383 aaKnown RBP12.07□□□□□ -0.48
MRPS28-207ENST00000521434 NPM2Q86SE8 214 aaKnown RBP12.07□□□□□ -0.48
MRPS28-207ENST00000521434 ZNF496Q96IT1 587 aaPredicted RBP12.07□□□□□ -0.48
MRPS28-207ENST00000521434 ABT1Q9ULW3 272 aaKnown RBP12.07□□□□□ -0.48
MRPS28-207ENST00000521434 THSD7BQ9C0I4 1608 aa12.07□□□□□ -0.48
MRPS28-207ENST00000521434 CAMTA2O94983 1202 aa12.06□□□□□ -0.48
MRPS28-207ENST00000521434 MAP1SQ66K74 1059 aaPredicted RBP12.06□□□□□ -0.48
MRPS28-207ENST00000521434 ZNF277Q9NRM2 450 aaPredicted RBP12.06□□□□□ -0.48
MRPS28-207ENST00000521434 RNF123Q5XPI4 1314 aa12.06□□□□□ -0.48
MRPS28-207ENST00000521434 CCDC85CA6NKD9 419 aa12.05□□□□□ -0.48
MRPS28-207ENST00000521434 NPR1P16066 1061 aa12.05□□□□□ -0.48
MRPS28-207ENST00000521434 ZNF790Q6PG37 636 aa12.05□□□□□ -0.48
MRPS28-207ENST00000521434 BEGAINQ9BUH8 593 aa12.05□□□□□ -0.48
MRPS28-207ENST00000521434 FZD9O00144 591 aa12.04□□□□□ -0.48
MRPS28-207ENST00000521434 TEFQ10587 303 aa12.04□□□□□ -0.48
MRPS28-207ENST00000521434 NBPF5PQ86XG9 351 aaPredicted RBP12.04□□□□□ -0.48
MRPS28-207ENST00000521434 RTKN2Q8IZC4 609 aa12.04□□□□□ -0.48
MRPS28-207ENST00000521434 GPC2Q8N158 579 aa12.04□□□□□ -0.48
MRPS28-207ENST00000521434 DDX21Q9NR30 783 aaKnown RBP eCLIP12.04□□□□□ -0.48
MRPS28-207ENST00000521434 CASP8AP2Q9UKL3 1982 aa12.04□□□□□ -0.48
MRPS28-207ENST00000521434 A1BGP04217 495 aa12.03□□□□□ -0.48
MRPS28-207ENST00000521434 IARSP41252 1262 aaKnown RBP12.03□□□□□ -0.48
MRPS28-207ENST00000521434 ECE1P42892 770 aa12.03□□□□□ -0.48
MRPS28-207ENST00000521434 CLEC4GQ6UXB4 293 aa12.03□□□□□ -0.48
MRPS28-207ENST00000521434 DZIP3Q86Y13 1208 aaKnown RBP12.03□□□□□ -0.48
MRPS28-207ENST00000521434 CAPNS2Q96L46 248 aa12.03□□□□□ -0.48
MRPS28-207ENST00000521434 FMNL2Q96PY5 1086 aa12.03□□□□□ -0.48
MRPS28-207ENST00000521434 TIMELESSQ9UNS1 1208 aa12.03□□□□□ -0.48
MRPS28-207ENST00000521434 KNSTRNQ9Y448 316 aa12.03□□□□□ -0.48
MRPS28-207ENST00000521434 KLRG2A4D1S0 409 aaPredicted RBP12.02□□□□□ -0.49
MRPS28-207ENST00000521434 OLFM4Q6UX06 510 aa12.01□□□□□ -0.49
MRPS28-207ENST00000521434 PAXIP1Q6ZW49 1069 aaPredicted RBP12.01□□□□□ -0.49
MRPS28-207ENST00000521434 SYNE4Q8N205 404 aa12.01□□□□□ -0.49
MRPS28-207ENST00000521434 IL17REQ8NFR9 667 aa12.01□□□□□ -0.49
MRPS28-207ENST00000521434 GPR101Q96P66 508 aaPredicted RBP12.01□□□□□ -0.49
MRPS28-207ENST00000521434 ZNF652Q9Y2D9 606 aa12.01□□□□□ -0.49
MRPS28-207ENST00000521434 LTBP1Q14766 1721 aa12□□□□□ -0.49
MRPS28-207ENST00000521434 GNAT3A8MTJ3 354 aa12□□□□□ -0.49
MRPS28-207ENST00000521434 DIAPH1O60610 1272 aaKnown RBP12□□□□□ -0.49
MRPS28-207ENST00000521434 LMOD1P29536 600 aaPredicted RBP12□□□□□ -0.49
MRPS28-207ENST00000521434 ALDH1B1P30837 517 aa12□□□□□ -0.49
MRPS28-207ENST00000521434 EIF4G2P78344 907 aaKnown RBP eCLIP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms