RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 ANKRD13DQ6ZTN6 518 aa8.13□□□□□ -1.11
IGHV4-55-201ENST00000520889 COPS6Q7L5N1 327 aa8.13□□□□□ -1.11
IGHV4-55-201ENST00000520889 DZIP3Q86Y13 1208 aaKnown RBP8.13□□□□□ -1.11
IGHV4-55-201ENST00000520889 COL23A1Q86Y22 540 aaPredicted RBP8.13□□□□□ -1.11
IGHV4-55-201ENST00000520889 NLGN1Q8N2Q7 840 aa8.13□□□□□ -1.11
IGHV4-55-201ENST00000520889 SSH1Q8WYL5 1049 aa8.13□□□□□ -1.11
IGHV4-55-201ENST00000520889 CAMTA2O94983 1202 aa8.12□□□□□ -1.11
IGHV4-55-201ENST00000520889 MYL6BP14649 208 aa8.12□□□□□ -1.11
IGHV4-55-201ENST00000520889 TRIM28Q13263 835 aaKnown RBP8.12□□□□□ -1.11
IGHV4-55-201ENST00000520889 PROSER3Q2NL68 480 aa8.12□□□□□ -1.11
IGHV4-55-201ENST00000520889 GIGYF2Q6Y7W6 1299 aaKnown RBP8.12□□□□□ -1.11
IGHV4-55-201ENST00000520889 XAGE3Q8WTP9 111 aa8.12□□□□□ -1.11
IGHV4-55-201ENST00000520889 PHAXQ9H814 394 aaKnown RBP8.12□□□□□ -1.11
IGHV4-55-201ENST00000520889 SMC4Q9NTJ3 1288 aa8.12□□□□□ -1.11
IGHV4-55-201ENST00000520889 RCAN3Q9UKA8 241 aa8.12□□□□□ -1.11
IGHV4-55-201ENST00000520889 AFDNP55196 1824 aaKnown RBP8.12□□□□□ -1.11
IGHV4-55-201ENST00000520889 RNF123Q5XPI4 1314 aa8.11□□□□□ -1.11
IGHV4-55-201ENST00000520889 KIF13BQ9NQT8 1826 aa8.11□□□□□ -1.11
IGHV4-55-201ENST00000520889 MS4A1P11836 297 aa8.11□□□□□ -1.11
IGHV4-55-201ENST00000520889 GYS1P13807 737 aa8.11□□□□□ -1.11
IGHV4-55-201ENST00000520889 AMIGO3Q86WK7 504 aa8.11□□□□□ -1.11
IGHV4-55-201ENST00000520889 NECTIN2Q92692 538 aa8.11□□□□□ -1.11
IGHV4-55-201ENST00000520889 API5Q9BZZ5 524 aaKnown RBP8.11□□□□□ -1.11
IGHV4-55-201ENST00000520889 MTFR1LQ9H019 292 aa8.11□□□□□ -1.11
IGHV4-55-201ENST00000520889 PHF14O94880 888 aa8.1□□□□□ -1.11
IGHV4-55-201ENST00000520889 ANXA1P04083 346 aa8.1□□□□□ -1.11
IGHV4-55-201ENST00000520889 TM4SF1P30408 202 aa8.1□□□□□ -1.11
IGHV4-55-201ENST00000520889 FKBP5Q13451 457 aaPredicted RBP8.1□□□□□ -1.11
IGHV4-55-201ENST00000520889 TCIRG1Q13488 830 aa8.1□□□□□ -1.11
IGHV4-55-201ENST00000520889 R3HDM1Q15032 1099 aaKnown RBP8.1□□□□□ -1.11
IGHV4-55-201ENST00000520889 PARP10Q53GL7 1025 aa8.1□□□□□ -1.11
IGHV4-55-201ENST00000520889 USPL1Q5W0Q7 1092 aa8.1□□□□□ -1.11
IGHV4-55-201ENST00000520889 ZKSCAN2Q63HK3 967 aa8.1□□□□□ -1.11
IGHV4-55-201ENST00000520889 TTLL7Q6ZT98 887 aa8.1□□□□□ -1.11
IGHV4-55-201ENST00000520889 G2E3Q7L622 706 aa8.1□□□□□ -1.11
IGHV4-55-201ENST00000520889 ZNF34Q8IZ26 560 aa8.1□□□□□ -1.11
IGHV4-55-201ENST00000520889 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.1□□□□□ -1.11
IGHV4-55-201ENST00000520889 DNAAF4Q8WXU2 420 aa8.1□□□□□ -1.11
IGHV4-55-201ENST00000520889 ISCA1Q9BUE6 129 aa8.1□□□□□ -1.11
IGHV4-55-201ENST00000520889 METTL22Q9BUU2 404 aaPredicted RBP8.1□□□□□ -1.11
IGHV4-55-201ENST00000520889 BCL2L12Q9HB09 334 aa8.1□□□□□ -1.11
IGHV4-55-201ENST00000520889 TBC1D2BQ9UPU7 963 aa8.1□□□□□ -1.11
IGHV4-55-201ENST00000520889 LRP5O75197 1615 aa8.1□□□□□ -1.11
IGHV4-55-201ENST00000520889 LAMB2P55268 1798 aa8.1□□□□□ -1.11
IGHV4-55-201ENST00000520889 ADCY9O60503 1353 aa8.1□□□□□ -1.11
IGHV4-55-201ENST00000520889 PI4KAP2A4QPH2 592 aa8.09□□□□□ -1.11
IGHV4-55-201ENST00000520889 ALDH1L1O75891 902 aa8.09□□□□□ -1.11
IGHV4-55-201ENST00000520889 PIP4K2AP48426 406 aaPredicted RBP8.09□□□□□ -1.11
IGHV4-55-201ENST00000520889 NEXNQ0ZGT2 675 aa8.09□□□□□ -1.11
IGHV4-55-201ENST00000520889 AIMP1Q12904 312 aaKnown RBP8.09□□□□□ -1.11
IGHV4-55-201ENST00000520889 ATF7IPQ6VMQ6 1270 aa8.09□□□□□ -1.11
IGHV4-55-201ENST00000520889 RIC3Q7Z5B4 369 aa8.09□□□□□ -1.11
IGHV4-55-201ENST00000520889 PI4KAP1Q8N8J0 262 aa8.09□□□□□ -1.11
IGHV4-55-201ENST00000520889 CCDC191Q8NCU4 936 aa8.09□□□□□ -1.11
IGHV4-55-201ENST00000520889 LINS1Q8NG48 757 aa8.09□□□□□ -1.11
IGHV4-55-201ENST00000520889 NOB1Q9ULX3 412 aaKnown RBP8.09□□□□□ -1.11
IGHV4-55-201ENST00000520889 RIC1Q4ADV7 1423 aa8.09□□□□□ -1.11
IGHV4-55-201ENST00000520889 CARMIL3Q8ND23 1372 aa8.09□□□□□ -1.12
IGHV4-55-201ENST00000520889 MYH3P11055 1940 aa8.08□□□□□ -1.12
IGHV4-55-201ENST00000520889 BCAR3O75815 825 aa8.08□□□□□ -1.12
IGHV4-55-201ENST00000520889 HSP90B1P14625 803 aaKnown RBP8.08□□□□□ -1.12
IGHV4-55-201ENST00000520889 CCT4P50991 539 aaKnown RBP8.08□□□□□ -1.12
IGHV4-55-201ENST00000520889 PDE3AQ14432 1141 aa8.08□□□□□ -1.12
IGHV4-55-201ENST00000520889 INTS3Q68E01 1043 aaKnown RBP8.08□□□□□ -1.12
IGHV4-55-201ENST00000520889 PPP1R42Q7Z4L9 355 aa8.08□□□□□ -1.12
IGHV4-55-201ENST00000520889 SETDB2Q96T68 719 aa8.08□□□□□ -1.12
IGHV4-55-201ENST00000520889 SGIP1Q9BQI5 828 aa8.08□□□□□ -1.12
IGHV4-55-201ENST00000520889 NYXQ9GZU5 481 aa8.08□□□□□ -1.12
IGHV4-55-201ENST00000520889 ZBTB3Q9H5J0 574 aa8.08□□□□□ -1.12
IGHV4-55-201ENST00000520889 SRP68Q9UHB9 627 aaKnown RBP8.08□□□□□ -1.12
IGHV4-55-201ENST00000520889 PDZRN3Q9UPQ7 1066 aa8.08□□□□□ -1.12
IGHV4-55-201ENST00000520889 MAP3K2Q9Y2U5 619 aa8.08□□□□□ -1.12
IGHV4-55-201ENST00000520889 ZNF330Q9Y3S2 320 aaPredicted RBP8.08□□□□□ -1.12
IGHV4-55-201ENST00000520889 ABCC4O15439 1325 aa8.07□□□□□ -1.12
IGHV4-55-201ENST00000520889 TCERG1O14776 1098 aaKnown RBP8.07□□□□□ -1.12
IGHV4-55-201ENST00000520889 POLD1P28340 1107 aa8.07□□□□□ -1.12
IGHV4-55-201ENST00000520889 FKBP8Q14318 412 aa8.07□□□□□ -1.12
IGHV4-55-201ENST00000520889 NFIXQ14938 502 aa8.07□□□□□ -1.12
IGHV4-55-201ENST00000520889 HLFQ16534 295 aa8.07□□□□□ -1.12
IGHV4-55-201ENST00000520889 BEND3Q5T5X7 828 aa8.07□□□□□ -1.12
IGHV4-55-201ENST00000520889 TPTE2Q6XPS3 522 aa8.07□□□□□ -1.12
IGHV4-55-201ENST00000520889 SRCIN1Q9C0H9 1055 aa8.07□□□□□ -1.12
IGHV4-55-201ENST00000520889 CHMP4BQ9H444 224 aaKnown RBP8.07□□□□□ -1.12
IGHV4-55-201ENST00000520889 SPON1Q9HCB6 807 aa8.07□□□□□ -1.12
IGHV4-55-201ENST00000520889 HDAC5Q9UQL6 1122 aa8.07□□□□□ -1.12
IGHV4-55-201ENST00000520889 CDHR2Q9BYE9 1310 aa8.06□□□□□ -1.12
IGHV4-55-201ENST00000520889 PSDA5PKW4 1024 aaPredicted RBP8.06□□□□□ -1.12
IGHV4-55-201ENST00000520889 NEURL1BA8MQ27 555 aa8.06□□□□□ -1.12
IGHV4-55-201ENST00000520889 POLRMTO00411 1230 aaKnown RBP8.06□□□□□ -1.12
IGHV4-55-201ENST00000520889 CENPBP07199 599 aaPredicted RBP8.06□□□□□ -1.12
IGHV4-55-201ENST00000520889 TRIM27P14373 513 aa8.06□□□□□ -1.12
IGHV4-55-201ENST00000520889 SLC10A5Q5PT55 438 aa8.06□□□□□ -1.12
IGHV4-55-201ENST00000520889 TBC1D9BQ66K14 1250 aa8.06□□□□□ -1.12
IGHV4-55-201ENST00000520889 NLRP10Q86W26 655 aa8.06□□□□□ -1.12
IGHV4-55-201ENST00000520889 DZIP1LQ8IYY4 767 aaKnown RBP8.06□□□□□ -1.12
IGHV4-55-201ENST00000520889 ARXQ96QS3 562 aa8.06□□□□□ -1.12
IGHV4-55-201ENST00000520889 BCL2L13Q9BXK5 485 aa8.06□□□□□ -1.12
IGHV4-55-201ENST00000520889 CWC25Q9NXE8 425 aaPredicted RBP8.06□□□□□ -1.12
IGHV4-55-201ENST00000520889 NIP7Q9Y221 180 aaKnown RBP eCLIP8.06□□□□□ -1.12
IGHV4-55-201ENST00000520889 PARP3Q9Y6F1 533 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms