RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 CARMIL3Q8ND23 1372 aa21.08■□□□□ 0.96
TNPO1-212ENST00000520850 KLHL34Q8N239 644 aa21.07■□□□□ 0.96
TNPO1-212ENST00000520850 HYPKQ9NX55 129 aa21.07■□□□□ 0.96
TNPO1-212ENST00000520850 PDZRN3Q9UPQ7 1066 aa21.07■□□□□ 0.96
TNPO1-212ENST00000520850 TTLL7Q6ZT98 887 aa21.06■□□□□ 0.96
TNPO1-212ENST00000520850 GOLGA2Q08379 1002 aa21.05■□□□□ 0.96
TNPO1-212ENST00000520850 CCDC30Q5VVM6 783 aa21.05■□□□□ 0.96
TNPO1-212ENST00000520850 GIGYF2Q6Y7W6 1299 aaKnown RBP21.05■□□□□ 0.96
TNPO1-212ENST00000520850 MYH16Q9H6N6 1097 aa21.05■□□□□ 0.96
TNPO1-212ENST00000520850 SALL2Q9Y467 1007 aaPredicted RBP21.05■□□□□ 0.96
TNPO1-212ENST00000520850 HLFQ16534 295 aa21.04■□□□□ 0.96
TNPO1-212ENST00000520850 PROSER3Q2NL68 480 aa21.04■□□□□ 0.96
TNPO1-212ENST00000520850 COPS6Q7L5N1 327 aa21.04■□□□□ 0.96
TNPO1-212ENST00000520850 TSR2Q969E8 191 aaKnown RBP21.04■□□□□ 0.96
TNPO1-212ENST00000520850 CHPF2Q9P2E5 772 aa21.04■□□□□ 0.96
TNPO1-212ENST00000520850 AFDNP55196 1824 aaKnown RBP21.04■□□□□ 0.96
TNPO1-212ENST00000520850 ATP10DQ9P241 1426 aa21.04■□□□□ 0.96
TNPO1-212ENST00000520850 BICDL1Q6ZP65 573 aa21.03■□□□□ 0.96
TNPO1-212ENST00000520850 FANCIQ9NVI1 1328 aa21.03■□□□□ 0.96
TNPO1-212ENST00000520850 GRIN3BO60391 1043 aa21.02■□□□□ 0.96
TNPO1-212ENST00000520850 HSP90AB3PQ58FF7 597 aa21.02■□□□□ 0.96
TNPO1-212ENST00000520850 TPTE2Q6XPS3 522 aa21.02■□□□□ 0.96
TNPO1-212ENST00000520850 ZNF34Q8IZ26 560 aa21.02■□□□□ 0.96
TNPO1-212ENST00000520850 TSPYL6Q8N831 410 aa21.02■□□□□ 0.96
TNPO1-212ENST00000520850 BRIP1Q9BX63 1249 aa21.02■□□□□ 0.96
TNPO1-212ENST00000520850 NIP7Q9Y221 180 aaKnown RBP eCLIP21.02■□□□□ 0.96
TNPO1-212ENST00000520850 PXDNLA1KZ92 1463 aa21.01■□□□□ 0.95
TNPO1-212ENST00000520850 SENP3-EIF4A1A0A087X0R7 540 aa21.01■□□□□ 0.95
TNPO1-212ENST00000520850 ELL2O00472 640 aaPredicted RBP21.01■□□□□ 0.95
TNPO1-212ENST00000520850 KCNA3P22001 575 aa21.01■□□□□ 0.95
TNPO1-212ENST00000520850 TWISTNBQ3B726 338 aaPredicted RBP21.01■□□□□ 0.95
TNPO1-212ENST00000520850 PRR5LQ6MZQ0 368 aa21.01■□□□□ 0.95
TNPO1-212ENST00000520850 XAGE3Q8WTP9 111 aa21.01■□□□□ 0.95
TNPO1-212ENST00000520850 NECTIN2Q92692 538 aa21.01■□□□□ 0.95
TNPO1-212ENST00000520850 NUP98P52948 1817 aa21.01■□□□□ 0.95
TNPO1-212ENST00000520850 IBTKQ9P2D0 1353 aaPredicted RBP21■□□□□ 0.95
TNPO1-212ENST00000520850 ANXA1P04083 346 aa21■□□□□ 0.95
TNPO1-212ENST00000520850 GPR162Q16538 588 aa21■□□□□ 0.95
TNPO1-212ENST00000520850 ANKRD13DQ6ZTN6 518 aa21■□□□□ 0.95
TNPO1-212ENST00000520850 PLBD2Q8NHP8 589 aa21■□□□□ 0.95
TNPO1-212ENST00000520850 SPINK5Q9NQ38 1064 aaPredicted RBP21■□□□□ 0.95
TNPO1-212ENST00000520850 KIAA1551Q9HCM1 1747 aa21■□□□□ 0.95
TNPO1-212ENST00000520850 VAMP4O75379 141 aa20.99■□□□□ 0.95
TNPO1-212ENST00000520850 DPEP1P16444 411 aa20.99■□□□□ 0.95
TNPO1-212ENST00000520850 PDE6BP35913 854 aa20.99■□□□□ 0.95
TNPO1-212ENST00000520850 PARP10Q53GL7 1025 aa20.99■□□□□ 0.95
TNPO1-212ENST00000520850 NBPF5PQ86XG9 351 aaPredicted RBP20.99■□□□□ 0.95
TNPO1-212ENST00000520850 CNBD1Q8NA66 436 aa20.99■□□□□ 0.95
TNPO1-212ENST00000520850 NYXQ9GZU5 481 aa20.99■□□□□ 0.95
TNPO1-212ENST00000520850 GOLGB1Q14789 3259 aaKnown RBP20.98■□□□□ 0.95
TNPO1-212ENST00000520850 A0A0G2JLW4 131 aa20.98■□□□□ 0.95
TNPO1-212ENST00000520850 KLRG2A4D1S0 409 aaPredicted RBP20.98■□□□□ 0.95
TNPO1-212ENST00000520850 E9PSI1 815 aa20.98■□□□□ 0.95
TNPO1-212ENST00000520850 ST5P78524 1137 aa20.98■□□□□ 0.95
TNPO1-212ENST00000520850 ZBTB3Q9H5J0 574 aa20.98■□□□□ 0.95
TNPO1-212ENST00000520850 PIM2Q9P1W9 311 aa20.98■□□□□ 0.95
TNPO1-212ENST00000520850 TCIRG1Q13488 830 aa20.97■□□□□ 0.95
TNPO1-212ENST00000520850 UTRNP46939 3433 aa20.97■□□□□ 0.95
TNPO1-212ENST00000520850 EXOSC9Q06265 439 aaKnown RBP20.96■□□□□ 0.95
TNPO1-212ENST00000520850 AIMP1Q12904 312 aaKnown RBP20.96■□□□□ 0.95
TNPO1-212ENST00000520850 TRIM28Q13263 835 aaKnown RBP20.96■□□□□ 0.95
TNPO1-212ENST00000520850 STK31Q9BXU1 1019 aa20.96■□□□□ 0.95
TNPO1-212ENST00000520850 RNF123Q5XPI4 1314 aa20.96■□□□□ 0.95
TNPO1-212ENST00000520850 H0YIN7 160 aa20.95■□□□□ 0.94
TNPO1-212ENST00000520850 YBX3P16989 372 aaKnown RBP eCLIP20.95■□□□□ 0.949e-7■■□□□ 12.4
TNPO1-212ENST00000520850 SLFN5Q08AF3 891 aa20.95■□□□□ 0.94
TNPO1-212ENST00000520850 PPP1R42Q7Z4L9 355 aa20.95■□□□□ 0.94
TNPO1-212ENST00000520850 TRMT2AQ8IZ69 625 aaKnown RBP20.95■□□□□ 0.94
TNPO1-212ENST00000520850 CACNA1FO60840 1977 aa20.95■□□□□ 0.94
TNPO1-212ENST00000520850 BRCA1P38398 1863 aaKnown RBP20.94■□□□□ 0.94
TNPO1-212ENST00000520850 N4BP2Q86UW6 1770 aaPredicted RBP20.93■□□□□ 0.94
TNPO1-212ENST00000520850 DDX58O95786 925 aaKnown RBP20.93■□□□□ 0.94
TNPO1-212ENST00000520850 SLC10A5Q5PT55 438 aa20.93■□□□□ 0.94
TNPO1-212ENST00000520850 ZNF428Q96B54 188 aa20.93■□□□□ 0.94
TNPO1-212ENST00000520850 PHAXQ9H814 394 aaKnown RBP20.93■□□□□ 0.94
TNPO1-212ENST00000520850 UBN2Q6ZU65 1347 aa20.93■□□□□ 0.94
TNPO1-212ENST00000520850 RIC1Q4ADV7 1423 aa20.93■□□□□ 0.94
TNPO1-212ENST00000520850 NPHP1O15259 732 aa20.92■□□□□ 0.94
TNPO1-212ENST00000520850 DALRD3Q5D0E6 543 aaKnown RBP20.92■□□□□ 0.94
TNPO1-212ENST00000520850 SUSD4Q5VX71 490 aa20.92■□□□□ 0.94
TNPO1-212ENST00000520850 ISCA1Q9BUE6 129 aa20.92■□□□□ 0.94
TNPO1-212ENST00000520850 NTSR2O95665 410 aa20.91■□□□□ 0.94
TNPO1-212ENST00000520850 SLC4A2P04920 1241 aa20.91■□□□□ 0.94
TNPO1-212ENST00000520850 CHRNA5P30532 468 aa20.91■□□□□ 0.94
TNPO1-212ENST00000520850 NLRP10Q86W26 655 aa20.91■□□□□ 0.94
TNPO1-212ENST00000520850 C2CD5Q86YS7 1000 aa20.91■□□□□ 0.94
TNPO1-212ENST00000520850 ANKRD31Q8N7Z5 1873 aa20.9■□□□□ 0.94
TNPO1-212ENST00000520850 SRGNP10124 158 aa20.9■□□□□ 0.94
TNPO1-212ENST00000520850 GTF2E1P29083 439 aaPredicted RBP20.9■□□□□ 0.94
TNPO1-212ENST00000520850 STYK1Q6J9G0 422 aa20.9■□□□□ 0.94
TNPO1-212ENST00000520850 RIC3Q7Z5B4 369 aa20.9■□□□□ 0.94
TNPO1-212ENST00000520850 TTLL6Q8N841 843 aa20.9■□□□□ 0.94
TNPO1-212ENST00000520850 UTP14AQ9BVJ6 771 aaKnown RBP20.9■□□□□ 0.94
TNPO1-212ENST00000520850 CT47B1P0C2W7 299 aaPredicted RBP20.89■□□□□ 0.93
TNPO1-212ENST00000520850 GPTP24298 496 aa20.89■□□□□ 0.93
TNPO1-212ENST00000520850 KSR2Q6VAB6 950 aa20.89■□□□□ 0.93
TNPO1-212ENST00000520850 PELP1Q8IZL8 1130 aaKnown RBP20.89■□□□□ 0.93
TNPO1-212ENST00000520850 MASTLQ96GX5 879 aa20.89■□□□□ 0.93
TNPO1-212ENST00000520850 BCS1LQ9Y276 419 aa20.89■□□□□ 0.93
TNPO1-212ENST00000520850 ANKRD36CQ5JPF3 1778 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms