RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 PLEKHF1Q96S99 279 aa20.1■□□□□ 0.81
CSMD1-207ENST00000520451 TNRC6CQ9HCJ0 1690 aaKnown RBP20.1■□□□□ 0.81
CSMD1-207ENST00000520451 NFE2L2Q16236 605 aa20.09■□□□□ 0.81
CSMD1-207ENST00000520451 PNISRQ8TF01 805 aaKnown RBP20.09■□□□□ 0.81
CSMD1-207ENST00000520451 STYK1Q6J9G0 422 aa20.08■□□□□ 0.81
CSMD1-207ENST00000520451 CNKSR1Q969H4 720 aa20.08■□□□□ 0.81
CSMD1-207ENST00000520451 MAPK8IP3Q9UPT6 1336 aa20.07■□□□□ 0.8
CSMD1-207ENST00000520451 GLTPD2A6NH11 291 aa20.07■□□□□ 0.8
CSMD1-207ENST00000520451 SRGNP10124 158 aa20.07■□□□□ 0.8
CSMD1-207ENST00000520451 FSTL1Q12841 308 aa20.07■□□□□ 0.8
CSMD1-207ENST00000520451 MASTLQ96GX5 879 aa20.07■□□□□ 0.8
CSMD1-207ENST00000520451 THUMPD2Q9BTF0 503 aaKnown RBP20.07■□□□□ 0.8
CSMD1-207ENST00000520451 NIP7Q9Y221 180 aaKnown RBP eCLIP20.07■□□□□ 0.8
CSMD1-207ENST00000520451 DLG5Q8TDM6 1919 aa20.07■□□□□ 0.8
CSMD1-207ENST00000520451 TIAM2Q8IVF5 1701 aa20.07■□□□□ 0.8
CSMD1-207ENST00000520451 PRPF40BQ6NWY9 871 aaKnown RBP20.06■□□□□ 0.8
CSMD1-207ENST00000520451 PNNQ9H307 717 aaKnown RBP20.06■□□□□ 0.8
CSMD1-207ENST00000520451 LAMB4A4D0S4 1761 aa20.06■□□□□ 0.8
CSMD1-207ENST00000520451 RGL2O15211 777 aa20.05■□□□□ 0.8
CSMD1-207ENST00000520451 KDM3BQ7LBC6 1761 aa20.04■□□□□ 0.8
CSMD1-207ENST00000520451 FAM177BA6PVY3 158 aa20.04■□□□□ 0.8
CSMD1-207ENST00000520451 EIF4A1P60842 406 aaKnown RBP20.04■□□□□ 0.8
CSMD1-207ENST00000520451 HLFQ16534 295 aa20.04■□□□□ 0.8
CSMD1-207ENST00000520451 TPTE2Q6XPS3 522 aa20.04■□□□□ 0.8
CSMD1-207ENST00000520451 NGEFQ8N5V2 710 aa20.04■□□□□ 0.8
CSMD1-207ENST00000520451 TAOK3Q9H2K8 898 aa20.04■□□□□ 0.8
CSMD1-207ENST00000520451 LTBP3Q9NS15 1303 aa20.03■□□□□ 0.8
CSMD1-207ENST00000520451 CCDC88AQ3V6T2 1871 aa20.03■□□□□ 0.8
CSMD1-207ENST00000520451 VEGFAP15692 232 aaPredicted RBP20.03■□□□□ 0.8
CSMD1-207ENST00000520451 ERFEQ4G0M1 354 aa20.03■□□□□ 0.8
CSMD1-207ENST00000520451 SOGA3Q5TF21 947 aa20.03■□□□□ 0.8
CSMD1-207ENST00000520451 SMC1BQ8NDV3 1235 aa20.03■□□□□ 0.8
CSMD1-207ENST00000520451 SLX4Q8IY92 1834 aa20.03■□□□□ 0.8
CSMD1-207ENST00000520451 RALBP1Q15311 655 aa20.02■□□□□ 0.8
CSMD1-207ENST00000520451 DNAJC5GQ8N7S2 189 aa20.02■□□□□ 0.8
CSMD1-207ENST00000520451 FER1L6Q2WGJ9 1857 aa20.02■□□□□ 0.8
CSMD1-207ENST00000520451 WDR90Q96KV7 1748 aa20.02■□□□□ 0.79
CSMD1-207ENST00000520451 CACNA1SQ13698 1873 aa20.01■□□□□ 0.79
CSMD1-207ENST00000520451 NPR1P16066 1061 aa20.01■□□□□ 0.79
CSMD1-207ENST00000520451 HTRA3P83110 453 aa20.01■□□□□ 0.79
CSMD1-207ENST00000520451 DPY19L2Q6NUT2 758 aa20.01■□□□□ 0.79
CSMD1-207ENST00000520451 RRP7AQ9Y3A4 280 aaKnown RBP20.01■□□□□ 0.79
CSMD1-207ENST00000520451 ARFGEF2Q9Y6D5 1785 aa20■□□□□ 0.79
CSMD1-207ENST00000520451 KLRG2A4D1S0 409 aaPredicted RBP20■□□□□ 0.79
CSMD1-207ENST00000520451 GTF2E1P29083 439 aaPredicted RBP20■□□□□ 0.79
CSMD1-207ENST00000520451 KIF6Q6ZMV9 814 aa20■□□□□ 0.79
CSMD1-207ENST00000520451 ERVV-1B6SEH8 477 aa19.99■□□□□ 0.79
CSMD1-207ENST00000520451 MYL6BP14649 208 aa19.99■□□□□ 0.79
CSMD1-207ENST00000520451 MAP3K15Q6ZN16 1313 aa19.99■□□□□ 0.79
CSMD1-207ENST00000520451 RIPK4P57078 832 aa19.98■□□□□ 0.79
CSMD1-207ENST00000520451 CCDC93Q567U6 631 aa19.98■□□□□ 0.79
CSMD1-207ENST00000520451 TTLL7Q6ZT98 887 aa19.98■□□□□ 0.79
CSMD1-207ENST00000520451 C7orf43Q8WVR3 580 aa19.98■□□□□ 0.79
CSMD1-207ENST00000520451 TSPYL4Q9UJ04 414 aa19.98■□□□□ 0.79
CSMD1-207ENST00000520451 NYXQ9GZU5 481 aa19.97■□□□□ 0.79
CSMD1-207ENST00000520451 DICER1Q9UPY3 1922 aaKnown RBP19.97■□□□□ 0.79
CSMD1-207ENST00000520451 POTECB2RU33 542 aa19.96■□□□□ 0.79
CSMD1-207ENST00000520451 DDX10Q13206 875 aaKnown RBP19.96■□□□□ 0.79
CSMD1-207ENST00000520451 NUTM1Q86Y26 1132 aa19.96■□□□□ 0.79
CSMD1-207ENST00000520451 ZBTB3Q9H5J0 574 aa19.96■□□□□ 0.79
CSMD1-207ENST00000520451 ABCC12Q96J65 1359 aa19.95■□□□□ 0.79
CSMD1-207ENST00000520451 GPTP24298 496 aa19.95■□□□□ 0.78
CSMD1-207ENST00000520451 KLRG1Q96E93 195 aa19.95■□□□□ 0.78
CSMD1-207ENST00000520451 ERBB4Q15303 1308 aa19.95■□□□□ 0.78
CSMD1-207ENST00000520451 ALDH1B1P30837 517 aa19.94■□□□□ 0.78
CSMD1-207ENST00000520451 TMPOP42166 694 aaKnown RBP19.94■□□□□ 0.78
CSMD1-207ENST00000520451 LMOD3Q0VAK6 560 aa19.94■□□□□ 0.78
CSMD1-207ENST00000520451 IFFO2Q5TF58 517 aa19.94■□□□□ 0.78
CSMD1-207ENST00000520451 OLFM4Q6UX06 510 aa19.94■□□□□ 0.78
CSMD1-207ENST00000520451 MYBBP1AQ9BQG0 1328 aaKnown RBP19.94■□□□□ 0.78
CSMD1-207ENST00000520451 DDNO94850 711 aaPredicted RBP19.93■□□□□ 0.78
CSMD1-207ENST00000520451 FKBP4Q02790 459 aaKnown RBP eCLIP19.93■□□□□ 0.78
CSMD1-207ENST00000520451 ZNF277Q9NRM2 450 aaPredicted RBP19.93■□□□□ 0.78
CSMD1-207ENST00000520451 UBN2Q6ZU65 1347 aa19.93■□□□□ 0.78
CSMD1-207ENST00000520451 NUP98P52948 1817 aa19.92■□□□□ 0.78
CSMD1-207ENST00000520451 EIF2S2P20042 333 aaKnown RBP19.92■□□□□ 0.78
CSMD1-207ENST00000520451 CRY2Q49AN0 593 aa19.92■□□□□ 0.78
CSMD1-207ENST00000520451 RTKN2Q8IZC4 609 aa19.92■□□□□ 0.78
CSMD1-207ENST00000520451 BABAM1Q9NWV8 329 aa19.92■□□□□ 0.78
CSMD1-207ENST00000520451 IBTKQ9P2D0 1353 aaPredicted RBP19.92■□□□□ 0.78
CSMD1-207ENST00000520451 SUSD4Q5VX71 490 aa19.91■□□□□ 0.78
CSMD1-207ENST00000520451 GIGYF2Q6Y7W6 1299 aaKnown RBP19.91■□□□□ 0.78
CSMD1-207ENST00000520451 CCDC146Q8IYE0 955 aa19.91■□□□□ 0.78
CSMD1-207ENST00000520451 PDIA6Q15084 440 aa19.9■□□□□ 0.78
CSMD1-207ENST00000520451 NEUROD2Q15784 382 aa19.9■□□□□ 0.78
CSMD1-207ENST00000520451 ZNF34Q8IZ26 560 aa19.9■□□□□ 0.78
CSMD1-207ENST00000520451 RPGRQ92834 1020 aaKnown RBP19.9■□□□□ 0.78
CSMD1-207ENST00000520451 RIC1Q4ADV7 1423 aa19.89■□□□□ 0.77
CSMD1-207ENST00000520451 LRP10Q7Z4F1 713 aa19.89■□□□□ 0.77
CSMD1-207ENST00000520451 NTSR2O95665 410 aa19.88■□□□□ 0.77
CSMD1-207ENST00000520451 ANXA1P04083 346 aa19.88■□□□□ 0.77
CSMD1-207ENST00000520451 WDR43Q15061 677 aaKnown RBP eCLIP19.88■□□□□ 0.77
CSMD1-207ENST00000520451 PROSER3Q2NL68 480 aa19.88■□□□□ 0.77
CSMD1-207ENST00000520451 SYNE4Q8N205 404 aa19.88■□□□□ 0.77
CSMD1-207ENST00000520451 JMYQ8N9B5 988 aa19.88■□□□□ 0.77
CSMD1-207ENST00000520451 ZNF541Q9H0D2 1346 aa19.87■□□□□ 0.77
CSMD1-207ENST00000520451 IQCA1LA6NCM1 817 aa19.87■□□□□ 0.77
CSMD1-207ENST00000520451 IARSP41252 1262 aaKnown RBP19.87■□□□□ 0.77
CSMD1-207ENST00000520451 PARP10Q53GL7 1025 aa19.87■□□□□ 0.77
CSMD1-207ENST00000520451 CHADLQ6NUI6 762 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms