RNA–Protein interactions for RNA: ENST00000519094.5

POLB-205, Transcript of DNA polymerase beta, humanhuman

TSL 3

Gene POLB, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-205ENST00000519094 NBPF15Q8N660 670 aa13.72□□□□□ -0.21
POLB-205ENST00000519094 NFATC2IPQ8NCF5 419 aa13.72□□□□□ -0.21
POLB-205ENST00000519094 FZD9O00144 591 aa13.71□□□□□ -0.21
POLB-205ENST00000519094 CYP19A1P11511 503 aaPredicted RBP13.71□□□□□ -0.21
POLB-205ENST00000519094 STYK1Q6J9G0 422 aa13.71□□□□□ -0.21
POLB-205ENST00000519094 PRR5LQ6MZQ0 368 aa13.71□□□□□ -0.21
POLB-205ENST00000519094 BICDL1Q6ZP65 573 aa13.71□□□□□ -0.21
POLB-205ENST00000519094 GPC2Q8N158 579 aa13.71□□□□□ -0.21
POLB-205ENST00000519094 HHIPL1Q96JK4 782 aa13.71□□□□□ -0.21
POLB-205ENST00000519094 CARD11Q9BXL7 1154 aa13.71□□□□□ -0.21
POLB-205ENST00000519094 ZNF277Q9NRM2 450 aaPredicted RBP13.71□□□□□ -0.21
POLB-205ENST00000519094 PPM1GO15355 546 aaPredicted RBP13.7□□□□□ -0.22
POLB-205ENST00000519094 SRGNP10124 158 aa13.7□□□□□ -0.22
POLB-205ENST00000519094 FKBP4Q02790 459 aaKnown RBP eCLIP13.7□□□□□ -0.22
POLB-205ENST00000519094 CCDC93Q567U6 631 aa13.69□□□□□ -0.22
POLB-205ENST00000519094 ZBTB1Q9Y2K1 713 aa13.69□□□□□ -0.22
POLB-205ENST00000519094 CUL9Q8IWT3 2517 aa13.68□□□□□ -0.22
POLB-205ENST00000519094 TBC1D9BQ66K14 1250 aa13.68□□□□□ -0.22
POLB-205ENST00000519094 MASTLQ96GX5 879 aa13.68□□□□□ -0.22
POLB-205ENST00000519094 ZIC5Q96T25 663 aa13.68□□□□□ -0.22
POLB-205ENST00000519094 ST20-MTHFSA0A0A6YYL1 179 aa13.67□□□□□ -0.22
POLB-205ENST00000519094 MTHFSP49914 203 aa13.67□□□□□ -0.22
POLB-205ENST00000519094 FXR1P51114 621 aaKnown RBP eCLIP13.67□□□□□ -0.22
POLB-205ENST00000519094 ZNF530Q6P9A1 599 aaPredicted RBP13.67□□□□□ -0.22
POLB-205ENST00000519094 TESK2Q96S53 571 aa13.67□□□□□ -0.22
POLB-205ENST00000519094 COL6A3P12111 3177 aa13.67□□□□□ -0.22
POLB-205ENST00000519094 EPS15P42566 896 aa13.66□□□□□ -0.22
POLB-205ENST00000519094 NOGQ13253 232 aa13.66□□□□□ -0.22
POLB-205ENST00000519094 PLEKHO1Q53GL0 409 aaPredicted RBP13.66□□□□□ -0.22
POLB-205ENST00000519094 CENPFP49454 3210 aa13.66□□□□□ -0.22
POLB-205ENST00000519094 BCORQ6W2J9 1755 aa13.66□□□□□ -0.22
POLB-205ENST00000519094 CELF2O95319 508 aaKnown RBP13.65□□□□□ -0.22
POLB-205ENST00000519094 LMOD1P29536 600 aaPredicted RBP13.65□□□□□ -0.22
POLB-205ENST00000519094 IARSP41252 1262 aaKnown RBP13.65□□□□□ -0.22
POLB-205ENST00000519094 SCNN1DP51172 638 aa13.65□□□□□ -0.22
POLB-205ENST00000519094 USP50Q70EL3 339 aaPredicted RBP13.65□□□□□ -0.22
POLB-205ENST00000519094 BRCA2P51587 3418 aa13.64□□□□□ -0.23
POLB-205ENST00000519094 SCN11AQ9UI33 1791 aa13.64□□□□□ -0.23
POLB-205ENST00000519094 DLL1O00548 723 aa13.64□□□□□ -0.23
POLB-205ENST00000519094 EIF4A2Q14240 407 aaKnown RBP13.64□□□□□ -0.23
POLB-205ENST00000519094 OLFM4Q6UX06 510 aa13.64□□□□□ -0.23
POLB-205ENST00000519094 SAGE1Q9NXZ1 904 aa13.64□□□□□ -0.23
POLB-205ENST00000519094 HPS5Q9UPZ3 1129 aa13.64□□□□□ -0.23
POLB-205ENST00000519094 GJA3Q9Y6H8 435 aa13.64□□□□□ -0.23
POLB-205ENST00000519094 SCN7AQ01118 1682 aa13.63□□□□□ -0.23
POLB-205ENST00000519094 EIF5P55010 431 aaKnown RBP13.63□□□□□ -0.23
POLB-205ENST00000519094 AMOTQ4VCS5 1084 aa13.63□□□□□ -0.23
POLB-205ENST00000519094 CTU1Q7Z7A3 348 aaKnown RBP13.63□□□□□ -0.23
POLB-205ENST00000519094 RTKN2Q8IZC4 609 aa13.63□□□□□ -0.23
POLB-205ENST00000519094 CNBD1Q8NA66 436 aa13.63□□□□□ -0.23
POLB-205ENST00000519094 HTTP42858 3142 aa13.63□□□□□ -0.23
POLB-205ENST00000519094 COL4A5P29400 1685 aa13.63□□□□□ -0.23
POLB-205ENST00000519094 CANXP27824 592 aaKnown RBP13.62□□□□□ -0.23
POLB-205ENST00000519094 SYNE4Q8N205 404 aa13.62□□□□□ -0.23
POLB-205ENST00000519094 SIN3AQ96ST3 1273 aa13.62□□□□□ -0.23
POLB-205ENST00000519094 AKAP11Q9UKA4 1901 aa13.61□□□□□ -0.23
POLB-205ENST00000519094 C1orf141Q5JVX7 400 aa13.61□□□□□ -0.23
POLB-205ENST00000519094 JDP2Q8WYK2 163 aa13.61□□□□□ -0.23
POLB-205ENST00000519094 POLKQ9UBT6 870 aa13.61□□□□□ -0.23
POLB-205ENST00000519094 A0A087WZG4 1122 aa13.6□□□□□ -0.23
POLB-205ENST00000519094 EIF6P56537 245 aaKnown RBP13.6□□□□□ -0.23
POLB-205ENST00000519094 ST5P78524 1137 aa13.6□□□□□ -0.23
POLB-205ENST00000519094 AKAP4Q5JQC9 854 aa13.6□□□□□ -0.23
POLB-205ENST00000519094 SNED1Q8TER0 1413 aa13.6□□□□□ -0.23
POLB-205ENST00000519094 GLIS2Q9BZE0 524 aaPredicted RBP13.6□□□□□ -0.23
POLB-205ENST00000519094 FAM155AB1AL88 458 aaPredicted RBP13.59□□□□□ -0.23
POLB-205ENST00000519094 TRPA1O75762 1119 aa13.59□□□□□ -0.23
POLB-205ENST00000519094 NPR1P16066 1061 aa13.59□□□□□ -0.23
POLB-205ENST00000519094 SLC39A6Q13433 755 aa13.59□□□□□ -0.23
POLB-205ENST00000519094 SETDB2Q96T68 719 aa13.59□□□□□ -0.23
POLB-205ENST00000519094 CARD14Q9BXL6 1004 aa13.59□□□□□ -0.23
POLB-205ENST00000519094 RNF186Q9NXI6 227 aa13.59□□□□□ -0.23
POLB-205ENST00000519094 RANBP2P49792 3224 aaKnown RBP13.59□□□□□ -0.23
POLB-205ENST00000519094 NPHP1O15259 732 aa13.58□□□□□ -0.24
POLB-205ENST00000519094 VSIG10Q8N0Z9 540 aa13.58□□□□□ -0.24
POLB-205ENST00000519094 PSMD1Q99460 953 aa13.58□□□□□ -0.24
POLB-205ENST00000519094 ZNF408Q9H9D4 720 aa13.58□□□□□ -0.24
POLB-205ENST00000519094 SLC52A2Q9HAB3 445 aa13.58□□□□□ -0.24
POLB-205ENST00000519094 ADARB2Q9NS39 739 aaKnown RBP13.58□□□□□ -0.24
POLB-205ENST00000519094 PGAP2Q9UHJ9 254 aa13.58□□□□□ -0.24
POLB-205ENST00000519094 KLRG2A4D1S0 409 aaPredicted RBP13.57□□□□□ -0.24
POLB-205ENST00000519094 SLC24A1O60721 1099 aa13.57□□□□□ -0.24
POLB-205ENST00000519094 HUNKP57058 714 aa13.57□□□□□ -0.24
POLB-205ENST00000519094 TBC1D2BQ9UPU7 963 aa13.57□□□□□ -0.24
POLB-205ENST00000519094 TRIOBPQ9H2D6 2365 aa13.57□□□□□ -0.24
POLB-205ENST00000519094 KIF23Q02241 960 aaPredicted RBP13.56□□□□□ -0.24
POLB-205ENST00000519094 NEUROD1Q13562 356 aa13.56□□□□□ -0.24
POLB-205ENST00000519094 PKN2Q16513 984 aaKnown RBP13.56□□□□□ -0.24
POLB-205ENST00000519094 GPRC5DQ9NZD1 345 aa13.56□□□□□ -0.24
POLB-205ENST00000519094 UBR2Q8IWV8 1755 aa13.55□□□□□ -0.24
POLB-205ENST00000519094 MRC1P22897 1456 aa13.55□□□□□ -0.24
POLB-205ENST00000519094 CEP290O15078 2479 aa13.54□□□□□ -0.24
POLB-205ENST00000519094 CAMTA2O94983 1202 aa13.54□□□□□ -0.24
POLB-205ENST00000519094 STARD3NLO95772 234 aa13.54□□□□□ -0.24
POLB-205ENST00000519094 RGMBQ6NW40 437 aa13.54□□□□□ -0.24
POLB-205ENST00000519094 AEBP1Q8IUX7 1158 aa13.54□□□□□ -0.24
POLB-205ENST00000519094 LGR6Q9HBX8 967 aa13.54□□□□□ -0.24
POLB-205ENST00000519094 CDC37L1Q7L3B6 337 aa13.53□□□□□ -0.24
POLB-205ENST00000519094 CSRNP1Q96S65 589 aa13.53□□□□□ -0.24
POLB-205ENST00000519094 SLC17A8Q8NDX2 589 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms