RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 CHMP3Q9Y3E7 222 aa15.98■□□□□ 0.15
PABPC1-208ENST00000519004 CFAP65Q6ZU64 1925 aaKnown RBP15.97■□□□□ 0.15
PABPC1-208ENST00000519004 ACTN2P35609 894 aa15.97■□□□□ 0.15
PABPC1-208ENST00000519004 SNW1Q13573 536 aaKnown RBP15.97■□□□□ 0.15
PABPC1-208ENST00000519004 DNAJC25Q9H1X3 360 aa15.97■□□□□ 0.15
PABPC1-208ENST00000519004 FANCAO15360 1455 aa15.97■□□□□ 0.15
PABPC1-208ENST00000519004 CHMLP26374 656 aa15.97■□□□□ 0.15
PABPC1-208ENST00000519004 CARD10Q9BWT7 1032 aa15.97■□□□□ 0.15
PABPC1-208ENST00000519004 SMC3Q9UQE7 1217 aa15.97■□□□□ 0.15
PABPC1-208ENST00000519004 TTC21BQ7Z4L5 1316 aa15.97■□□□□ 0.15
PABPC1-208ENST00000519004 ELL2O00472 640 aaPredicted RBP15.96■□□□□ 0.15
PABPC1-208ENST00000519004 CNPY4Q8N129 248 aa15.96■□□□□ 0.15
PABPC1-208ENST00000519004 TTC14Q96N46 770 aa15.96■□□□□ 0.15
PABPC1-208ENST00000519004 ADGRF5Q8IZF2 1346 aa15.96■□□□□ 0.15
PABPC1-208ENST00000519004 LMAN1P49257 510 aa15.96■□□□□ 0.15
PABPC1-208ENST00000519004 DACT1Q9NYF0 836 aa15.96■□□□□ 0.15
PABPC1-208ENST00000519004 PLCH2O75038 1416 aa15.95■□□□□ 0.14
PABPC1-208ENST00000519004 TSHZ3Q63HK5 1081 aa15.95■□□□□ 0.14
PABPC1-208ENST00000519004 ADAM21Q9UKJ8 722 aa15.95■□□□□ 0.14
PABPC1-208ENST00000519004 USP16Q9Y5T5 823 aa15.95■□□□□ 0.14
PABPC1-208ENST00000519004 HSPA4P34932 840 aa15.95■□□□□ 0.14
PABPC1-208ENST00000519004 GSCP56915 257 aaPredicted RBP15.95■□□□□ 0.14
PABPC1-208ENST00000519004 E4F1Q66K89 784 aaPredicted RBP15.95■□□□□ 0.14
PABPC1-208ENST00000519004 RUFY3Q7L099 469 aa15.95■□□□□ 0.14
PABPC1-208ENST00000519004 SUGP1Q8IWZ8 645 aaKnown RBP15.95■□□□□ 0.14
PABPC1-208ENST00000519004 UBXN4Q92575 508 aa15.95■□□□□ 0.14
PABPC1-208ENST00000519004 CLSTN2Q9H4D0 955 aa15.95■□□□□ 0.14
PABPC1-208ENST00000519004 DONSONQ9NYP3 566 aa15.95■□□□□ 0.14
PABPC1-208ENST00000519004 AK2P54819 239 aa15.94■□□□□ 0.14
PABPC1-208ENST00000519004 PPP1R13BQ96KQ4 1090 aa15.94■□□□□ 0.14
PABPC1-208ENST00000519004 LARP6Q9BRS8 491 aaKnown RBP15.94■□□□□ 0.14
PABPC1-208ENST00000519004 DEF6Q9H4E7 631 aa15.94■□□□□ 0.14
PABPC1-208ENST00000519004 CXorf56Q9H5V9 222 aa15.94■□□□□ 0.14
PABPC1-208ENST00000519004 SALL3Q9BXA9 1300 aa15.94■□□□□ 0.14
PABPC1-208ENST00000519004 QRICH2Q9H0J4 1663 aa15.94■□□□□ 0.14
PABPC1-208ENST00000519004 IQCB1Q15051 598 aa15.94■□□□□ 0.14
PABPC1-208ENST00000519004 SWT1Q5T5J6 900 aaKnown RBP15.94■□□□□ 0.14
PABPC1-208ENST00000519004 SYTL4Q96C24 671 aaPredicted RBP15.94■□□□□ 0.14
PABPC1-208ENST00000519004 CCDC34Q96HJ3 373 aa15.94■□□□□ 0.14
PABPC1-208ENST00000519004 CARMIL2Q6F5E8 1435 aa15.93■□□□□ 0.14
PABPC1-208ENST00000519004 EIF3CLB5ME19 914 aaKnown RBP15.93■□□□□ 0.14
PABPC1-208ENST00000519004 TADA3O75528 432 aa15.93■□□□□ 0.14
PABPC1-208ENST00000519004 IVLP07476 585 aa15.93■□□□□ 0.14
PABPC1-208ENST00000519004 GJB2P29033 226 aa15.93■□□□□ 0.14
PABPC1-208ENST00000519004 CC2D1AQ6P1N0 951 aaPredicted RBP15.93■□□□□ 0.14
PABPC1-208ENST00000519004 EIF3CQ99613 913 aaKnown RBP15.93■□□□□ 0.14
PABPC1-208ENST00000519004 DDX19AQ9NUU7 478 aaKnown RBP15.93■□□□□ 0.14
PABPC1-208ENST00000519004 LARGE1O95461 756 aa15.93■□□□□ 0.14
PABPC1-208ENST00000519004 E2F4Q16254 413 aa15.93■□□□□ 0.14
PABPC1-208ENST00000519004 KRT24Q2M2I5 525 aa15.93■□□□□ 0.14
PABPC1-208ENST00000519004 THUMPD2Q9BTF0 503 aaKnown RBP15.93■□□□□ 0.14
PABPC1-208ENST00000519004 IL25Q9H293 177 aa15.93■□□□□ 0.14
PABPC1-208ENST00000519004 LIMCH1Q9UPQ0 1083 aa15.93■□□□□ 0.14
PABPC1-208ENST00000519004 GLI2P10070 1586 aa15.92■□□□□ 0.14
PABPC1-208ENST00000519004 LRRC7Q96NW7 1537 aa15.92■□□□□ 0.14
PABPC1-208ENST00000519004 DTNBO60941 627 aa15.92■□□□□ 0.14
PABPC1-208ENST00000519004 TWISTNBQ3B726 338 aaPredicted RBP15.92■□□□□ 0.14
PABPC1-208ENST00000519004 CCDC158Q5M9N0 1113 aa15.92■□□□□ 0.14
PABPC1-208ENST00000519004 CCDC91Q7Z6B0 441 aa15.92■□□□□ 0.14
PABPC1-208ENST00000519004 TTC21AQ8NDW8 1320 aa15.92■□□□□ 0.14
PABPC1-208ENST00000519004 GORABQ5T7V8 394 aa15.92■□□□□ 0.14
PABPC1-208ENST00000519004 FOXR1Q6PIV2 292 aa15.92■□□□□ 0.14
PABPC1-208ENST00000519004 MBIPQ9NS73 344 aa15.92■□□□□ 0.14
PABPC1-208ENST00000519004 YTHDC2Q9H6S0 1430 aaKnown RBP15.91■□□□□ 0.14
PABPC1-208ENST00000519004 NEURL4Q96JN8 1562 aa15.91■□□□□ 0.14
PABPC1-208ENST00000519004 H3BQF6 201 aa15.91■□□□□ 0.14
PABPC1-208ENST00000519004 MCTP2Q6DN12 878 aa15.91■□□□□ 0.14
PABPC1-208ENST00000519004 KRT85P78386 507 aa15.9■□□□□ 0.14
PABPC1-208ENST00000519004 PPM1EQ8WY54 764 aa15.9■□□□□ 0.14
PABPC1-208ENST00000519004 ZSCAN16Q9H4T2 348 aaPredicted RBP15.9■□□□□ 0.14
PABPC1-208ENST00000519004 MSH6P52701 1360 aa15.9■□□□□ 0.14
PABPC1-208ENST00000519004 KIAA0232Q92628 1395 aa15.9■□□□□ 0.14
PABPC1-208ENST00000519004 VPS37CA5D8V6 355 aaPredicted RBP15.9■□□□□ 0.14
PABPC1-208ENST00000519004 RPS6KA5O75582 802 aa15.9■□□□□ 0.14
PABPC1-208ENST00000519004 ZNF853P0CG23 659 aa15.9■□□□□ 0.14
PABPC1-208ENST00000519004 LEKR1Q6ZMV7 388 aa15.9■□□□□ 0.14
PABPC1-208ENST00000519004 C8orf58Q8NAV2 365 aa15.9■□□□□ 0.14
PABPC1-208ENST00000519004 PSDA5PKW4 1024 aaPredicted RBP15.89■□□□□ 0.13
PABPC1-208ENST00000519004 GOLGA6L19H0YKK7 550 aa15.89■□□□□ 0.13
PABPC1-208ENST00000519004 EPB41L2O43491 1005 aaKnown RBP15.89■□□□□ 0.13
PABPC1-208ENST00000519004 CAVIN2O95810 425 aa15.89■□□□□ 0.13
PABPC1-208ENST00000519004 CPP00450 1065 aa15.89■□□□□ 0.13
PABPC1-208ENST00000519004 GNAI3P08754 354 aa15.89■□□□□ 0.13
PABPC1-208ENST00000519004 CORO7P57737 925 aa15.89■□□□□ 0.13
PABPC1-208ENST00000519004 SNX14Q9Y5W7 946 aa15.89■□□□□ 0.13
PABPC1-208ENST00000519004 C11orf57Q6ZUT1 292 aaPredicted RBP15.89■□□□□ 0.13
PABPC1-208ENST00000519004 CCDC83Q8IWF9 413 aa15.89■□□□□ 0.13
PABPC1-208ENST00000519004 RILPL2Q969X0 211 aa15.89■□□□□ 0.13
PABPC1-208ENST00000519004 FUT8Q9BYC5 575 aa15.89■□□□□ 0.13
PABPC1-208ENST00000519004 EPC1Q9H2F5 836 aa15.89■□□□□ 0.13
PABPC1-208ENST00000519004 VWDEQ8N2E2 1590 aa15.88■□□□□ 0.13
PABPC1-208ENST00000519004 EFCAB8A8MWE9 144 aa15.88■□□□□ 0.13
PABPC1-208ENST00000519004 TPM1P09493 284 aa15.88■□□□□ 0.13
PABPC1-208ENST00000519004 GNAI1P63096 354 aa15.88■□□□□ 0.13
PABPC1-208ENST00000519004 MEIS3Q99687 375 aa15.88■□□□□ 0.13
PABPC1-208ENST00000519004 NR1I2O75469 434 aa15.88■□□□□ 0.13
PABPC1-208ENST00000519004 TUBB4AP04350 444 aa15.88■□□□□ 0.13
PABPC1-208ENST00000519004 GSDMDP57764 484 aa15.88■□□□□ 0.13
PABPC1-208ENST00000519004 FAM173BQ6P4H8 233 aa15.88■□□□□ 0.13
PABPC1-208ENST00000519004 MMS22LQ6ZRQ5 1243 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms