RNA–Protein interactions for RNA: ENST00000518794.6

ARFGAP1-209, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 1 (best)

Gene ARFGAP1, Length 2,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-209ENST00000518794 ZKSCAN5Q9Y2L8 839 aa21.81■■□□□ 1.08
ARFGAP1-209ENST00000518794 SYT1P21579 422 aa21.81■■□□□ 1.08
ARFGAP1-209ENST00000518794 PRPF40BQ6NWY9 871 aaKnown RBP21.81■■□□□ 1.08
ARFGAP1-209ENST00000518794 CCDC83Q8IWF9 413 aa21.81■■□□□ 1.08
ARFGAP1-209ENST00000518794 MAP3K2Q9Y2U5 619 aa21.81■■□□□ 1.08
ARFGAP1-209ENST00000518794 PHF8Q9UPP1 1060 aa21.8■■□□□ 1.08
ARFGAP1-209ENST00000518794 CEMIPQ8WUJ3 1361 aa21.8■■□□□ 1.08
ARFGAP1-209ENST00000518794 PXDNLA1KZ92 1463 aa21.8■■□□□ 1.08
ARFGAP1-209ENST00000518794 PTMAP06454 111 aaKnown RBP21.8■■□□□ 1.08
ARFGAP1-209ENST00000518794 ZNF830Q96NB3 372 aaPredicted RBP21.8■■□□□ 1.08
ARFGAP1-209ENST00000518794 DIAPH3Q9NSV4 1193 aa21.8■■□□□ 1.08
ARFGAP1-209ENST00000518794 IP6K1Q92551 441 aa21.79■■□□□ 1.08
ARFGAP1-209ENST00000518794 MARF1Q9Y4F3 1742 aaKnown RBP21.79■■□□□ 1.08
ARFGAP1-209ENST00000518794 THEMISQ8N1K5 641 aaPredicted RBP21.79■■□□□ 1.08
ARFGAP1-209ENST00000518794 JAKMIP1Q96N16 626 aaKnown RBP21.79■■□□□ 1.08
ARFGAP1-209ENST00000518794 C9orf78Q9NZ63 289 aaPredicted RBP21.79■■□□□ 1.08
ARFGAP1-209ENST00000518794 HS1BP3Q53T59 392 aa21.79■■□□□ 1.08
ARFGAP1-209ENST00000518794 IL17RAQ96F46 866 aa21.79■■□□□ 1.08
ARFGAP1-209ENST00000518794 STX6O43752 255 aa21.78■■□□□ 1.08
ARFGAP1-209ENST00000518794 ZSCAN22P10073 491 aaPredicted RBP21.78■■□□□ 1.08
ARFGAP1-209ENST00000518794 BABAM1Q9NWV8 329 aa21.78■■□□□ 1.08
ARFGAP1-209ENST00000518794 LIMCH1Q9UPQ0 1083 aa21.78■■□□□ 1.08
ARFGAP1-209ENST00000518794 AIMP1Q12904 312 aaKnown RBP21.78■■□□□ 1.08
ARFGAP1-209ENST00000518794 LMOD2Q6P5Q4 547 aa21.78■■□□□ 1.08
ARFGAP1-209ENST00000518794 NECAB1Q8N987 351 aa21.78■■□□□ 1.08
ARFGAP1-209ENST00000518794 SMC3Q9UQE7 1217 aa21.78■■□□□ 1.08
ARFGAP1-209ENST00000518794 USP25Q9UHP3 1055 aa21.77■■□□□ 1.08
ARFGAP1-209ENST00000518794 ZNF500O60304 480 aaPredicted RBP21.77■■□□□ 1.07
ARFGAP1-209ENST00000518794 GTF2E1P29083 439 aaPredicted RBP21.77■■□□□ 1.07
ARFGAP1-209ENST00000518794 ESCO1Q5FWF5 840 aa21.77■■□□□ 1.07
ARFGAP1-209ENST00000518794 SYAP1Q96A49 352 aaPredicted RBP21.77■■□□□ 1.07
ARFGAP1-209ENST00000518794 CLASRPQ8N2M8 674 aaKnown RBP21.76■■□□□ 1.07
ARFGAP1-209ENST00000518794 TCEANC2Q96MN5 208 aa21.76■■□□□ 1.07
ARFGAP1-209ENST00000518794 HCLS1P14317 486 aaPredicted RBP21.76■■□□□ 1.07
ARFGAP1-209ENST00000518794 AACSQ86V21 672 aa21.76■■□□□ 1.07
ARFGAP1-209ENST00000518794 FAM227BQ96M60 508 aa21.76■■□□□ 1.07
ARFGAP1-209ENST00000518794 SIL1Q9H173 461 aa21.76■■□□□ 1.07
ARFGAP1-209ENST00000518794 HYPKQ9NX55 129 aa21.76■■□□□ 1.07
ARFGAP1-209ENST00000518794 CCDC39Q9UFE4 941 aa21.76■■□□□ 1.07
ARFGAP1-209ENST00000518794 GLRX3O76003 335 aaKnown RBP21.75■■□□□ 1.07
ARFGAP1-209ENST00000518794 PSME1Q06323 249 aa21.75■■□□□ 1.07
ARFGAP1-209ENST00000518794 DMTNQ08495 405 aa21.75■■□□□ 1.07
ARFGAP1-209ENST00000518794 CCDC8Q9H0W5 538 aaPredicted RBP21.75■■□□□ 1.07
ARFGAP1-209ENST00000518794 ARHGAP23Q9P227 1491 aa21.75■■□□□ 1.07
ARFGAP1-209ENST00000518794 GJB2P29033 226 aa21.75■■□□□ 1.07
ARFGAP1-209ENST00000518794 KLHDC4Q8TBB5 520 aa21.75■■□□□ 1.07
ARFGAP1-209ENST00000518794 CACNA1FO60840 1977 aa21.75■■□□□ 1.07
ARFGAP1-209ENST00000518794 IFIT2P09913 472 aaKnown RBP21.74■■□□□ 1.07
ARFGAP1-209ENST00000518794 DNM1Q05193 864 aaKnown RBP21.74■■□□□ 1.07
ARFGAP1-209ENST00000518794 TLR7Q9NYK1 1049 aaKnown RBP21.74■■□□□ 1.07
ARFGAP1-209ENST00000518794 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.74■■□□□ 1.07
ARFGAP1-209ENST00000518794 SLIT1O75093 1534 aa21.74■■□□□ 1.07
ARFGAP1-209ENST00000518794 PDRG1Q9NUG6 133 aa21.74■■□□□ 1.07
ARFGAP1-209ENST00000518794 F13A1P00488 732 aa21.73■■□□□ 1.07
ARFGAP1-209ENST00000518794 PLCB2Q00722 1185 aa21.73■■□□□ 1.07
ARFGAP1-209ENST00000518794 ST3GAL1Q11201 340 aa21.73■■□□□ 1.07
ARFGAP1-209ENST00000518794 ECHDC1Q9NTX5 307 aa21.73■■□□□ 1.07
ARFGAP1-209ENST00000518794 VPS37CA5D8V6 355 aaPredicted RBP21.73■■□□□ 1.07
ARFGAP1-209ENST00000518794 GIMAP6Q6P9H5 292 aa21.73■■□□□ 1.07
ARFGAP1-209ENST00000518794 C17orf53Q8N3J3 647 aaPredicted RBP21.73■■□□□ 1.07
ARFGAP1-209ENST00000518794 CHMP3Q9Y3E7 222 aa21.73■■□□□ 1.07
ARFGAP1-209ENST00000518794 TAF6LQ9Y6J9 622 aa21.72■■□□□ 1.07
ARFGAP1-209ENST00000518794 JARID2Q92833 1246 aaPredicted RBP21.72■■□□□ 1.07
ARFGAP1-209ENST00000518794 DBF4Q9UBU7 674 aaPredicted RBP21.72■■□□□ 1.07
ARFGAP1-209ENST00000518794 ANKARQ7Z5J8 1434 aa21.72■■□□□ 1.07
ARFGAP1-209ENST00000518794 PXDNQ92626 1479 aa21.72■■□□□ 1.07
ARFGAP1-209ENST00000518794 ZSCAN20P17040 1043 aaPredicted RBP21.71■■□□□ 1.07
ARFGAP1-209ENST00000518794 FAM173BQ6P4H8 233 aa21.71■■□□□ 1.07
ARFGAP1-209ENST00000518794 SUCLG2Q96I99 432 aa21.71■■□□□ 1.07
ARFGAP1-209ENST00000518794 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.71■■□□□ 1.07
ARFGAP1-209ENST00000518794 RNMTO43148 476 aaKnown RBP21.71■■□□□ 1.07
ARFGAP1-209ENST00000518794 KCNJ4P48050 445 aa21.71■■□□□ 1.07
ARFGAP1-209ENST00000518794 HSP90AB4PQ58FF6 505 aa21.71■■□□□ 1.07
ARFGAP1-209ENST00000518794 AKAP4Q5JQC9 854 aa21.71■■□□□ 1.07
ARFGAP1-209ENST00000518794 CCDC183Q5T5S1 534 aa21.71■■□□□ 1.07
ARFGAP1-209ENST00000518794 UTP14CQ5TAP6 766 aaKnown RBP21.71■■□□□ 1.07
ARFGAP1-209ENST00000518794 GIGYF1O75420 1035 aaPredicted RBP21.71■■□□□ 1.07
ARFGAP1-209ENST00000518794 ME3Q16798 604 aa21.71■■□□□ 1.07
ARFGAP1-209ENST00000518794 FERMT3Q86UX7 667 aa21.71■■□□□ 1.07
ARFGAP1-209ENST00000518794 LTN1O94822 1766 aa21.7■■□□□ 1.06
ARFGAP1-209ENST00000518794 RGPD2P0DJD1 1756 aa21.7■■□□□ 1.06
ARFGAP1-209ENST00000518794 PHF14O94880 888 aa21.7■■□□□ 1.06
ARFGAP1-209ENST00000518794 EAF2Q96CJ1 260 aaPredicted RBP21.7■■□□□ 1.06
ARFGAP1-209ENST00000518794 KAZALD1Q96I82 304 aa21.7■■□□□ 1.06
ARFGAP1-209ENST00000518794 BOLA2Q9H3K6 86 aa21.7■■□□□ 1.06
ARFGAP1-209ENST00000518794 BICC1Q9H694 974 aaKnown RBP21.7■■□□□ 1.06
ARFGAP1-209ENST00000518794 TTC41PQ6P2S7 1318 aa21.7■■□□□ 1.06
ARFGAP1-209ENST00000518794 SASH1O94885 1247 aa21.7■■□□□ 1.06
ARFGAP1-209ENST00000518794 PDIA4P13667 645 aaKnown RBP21.7■■□□□ 1.06
ARFGAP1-209ENST00000518794 C1orf141Q5JVX7 400 aa21.7■■□□□ 1.06
ARFGAP1-209ENST00000518794 MTMR6Q9Y217 621 aa21.7■■□□□ 1.06
ARFGAP1-209ENST00000518794 NMIQ13287 307 aaPredicted RBP21.69■■□□□ 1.06
ARFGAP1-209ENST00000518794 PLEKHO1Q53GL0 409 aaPredicted RBP21.69■■□□□ 1.06
ARFGAP1-209ENST00000518794 EDC3Q96F86 508 aaKnown RBP21.69■■□□□ 1.06
ARFGAP1-209ENST00000518794 TTC12Q9H892 705 aaPredicted RBP21.69■■□□□ 1.06
ARFGAP1-209ENST00000518794 RBM8AQ9Y5S9 174 aaKnown RBP21.69■■□□□ 1.06
ARFGAP1-209ENST00000518794 N4BP2Q86UW6 1770 aaPredicted RBP21.69■■□□□ 1.06
ARFGAP1-209ENST00000518794 SLC39A6Q13433 755 aa21.69■■□□□ 1.06
ARFGAP1-209ENST00000518794 KSR2Q6VAB6 950 aa21.69■■□□□ 1.06
ARFGAP1-209ENST00000518794 MTERF4Q7Z6M4 381 aaKnown RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms