RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 RTF1Q92541 710 aaKnown RBP20.38■□□□□ 0.85
CSGALNACT1-204ENST00000517494 RSPH6AQ9H0K4 717 aa20.38■□□□□ 0.85
CSGALNACT1-204ENST00000517494 USP16Q9Y5T5 823 aa20.38■□□□□ 0.85
CSGALNACT1-204ENST00000517494 HSPA1AP0DMV8 641 aaKnown RBP20.37■□□□□ 0.85
CSGALNACT1-204ENST00000517494 HSPA1BP0DMV9 641 aaKnown RBP20.37■□□□□ 0.85
CSGALNACT1-204ENST00000517494 SRGNP10124 158 aa20.37■□□□□ 0.85
CSGALNACT1-204ENST00000517494 STYK1Q6J9G0 422 aa20.37■□□□□ 0.85
CSGALNACT1-204ENST00000517494 MASTLQ96GX5 879 aa20.37■□□□□ 0.85
CSGALNACT1-204ENST00000517494 NUDCQ9Y266 331 aa20.37■□□□□ 0.85
CSGALNACT1-204ENST00000517494 PCNTO95613 3336 aa20.37■□□□□ 0.85
CSGALNACT1-204ENST00000517494 DDNO94850 711 aaPredicted RBP20.36■□□□□ 0.85
CSGALNACT1-204ENST00000517494 U2AF1L5P0DN76 240 aaPredicted RBP20.36■□□□□ 0.85
CSGALNACT1-204ENST00000517494 U2AF1Q01081 240 aaKnown RBP eCLIP20.36■□□□□ 0.85
CSGALNACT1-204ENST00000517494 MCM10Q7L590 875 aa20.36■□□□□ 0.85
CSGALNACT1-204ENST00000517494 SIPA1L3O60292 1781 aaPredicted RBP20.36■□□□□ 0.85
CSGALNACT1-204ENST00000517494 LTBP3Q9NS15 1303 aa20.35■□□□□ 0.85
CSGALNACT1-204ENST00000517494 FAM177BA6PVY3 158 aa20.35■□□□□ 0.85
CSGALNACT1-204ENST00000517494 SOGA3Q5TF21 947 aa20.35■□□□□ 0.85
CSGALNACT1-204ENST00000517494 ZNF652Q9Y2D9 606 aa20.35■□□□□ 0.85
CSGALNACT1-204ENST00000517494 CCDC88AQ3V6T2 1871 aa20.35■□□□□ 0.85
CSGALNACT1-204ENST00000517494 SNRPA1P09661 255 aaKnown RBP20.34■□□□□ 0.85
CSGALNACT1-204ENST00000517494 CHADLQ6NUI6 762 aa20.34■□□□□ 0.85
CSGALNACT1-204ENST00000517494 POTEIP0CG38 1075 aa20.33■□□□□ 0.85
CSGALNACT1-204ENST00000517494 POTEJP0CG39 1038 aa20.33■□□□□ 0.85
CSGALNACT1-204ENST00000517494 DCTN1Q14203 1278 aa20.33■□□□□ 0.85
CSGALNACT1-204ENST00000517494 CCDC93Q567U6 631 aa20.32■□□□□ 0.84
CSGALNACT1-204ENST00000517494 MKRN1Q9UHC7 482 aaKnown RBP20.32■□□□□ 0.84
CSGALNACT1-204ENST00000517494 NIP7Q9Y221 180 aaKnown RBP eCLIP20.32■□□□□ 0.84
CSGALNACT1-204ENST00000517494 CLEC4GQ6UXB4 293 aa20.31■□□□□ 0.84
CSGALNACT1-204ENST00000517494 BCORQ6W2J9 1755 aa20.31■□□□□ 0.84
CSGALNACT1-204ENST00000517494 FER1L6Q2WGJ9 1857 aa20.3■□□□□ 0.84
CSGALNACT1-204ENST00000517494 SLX4Q8IY92 1834 aa20.3■□□□□ 0.84
CSGALNACT1-204ENST00000517494 NPR1P16066 1061 aa20.3■□□□□ 0.84
CSGALNACT1-204ENST00000517494 IQCA1LA6NCM1 817 aa20.29■□□□□ 0.84
CSGALNACT1-204ENST00000517494 GTF2E1P29083 439 aaPredicted RBP20.29■□□□□ 0.84
CSGALNACT1-204ENST00000517494 TPTE2Q6XPS3 522 aa20.29■□□□□ 0.84
CSGALNACT1-204ENST00000517494 ZNF277Q9NRM2 450 aaPredicted RBP20.29■□□□□ 0.84
CSGALNACT1-204ENST00000517494 CREBZFQ9NS37 354 aa20.29■□□□□ 0.84
CSGALNACT1-204ENST00000517494 CACNA1SQ13698 1873 aa20.28■□□□□ 0.84
CSGALNACT1-204ENST00000517494 NBPF26B4DH59 902 aa20.28■□□□□ 0.84
CSGALNACT1-204ENST00000517494 PPP2R1AP30153 589 aa20.28■□□□□ 0.84
CSGALNACT1-204ENST00000517494 NBPF10Q6P3W6 841 aaKnown RBP20.28■□□□□ 0.84
CSGALNACT1-204ENST00000517494 OLFM4Q6UX06 510 aa20.28■□□□□ 0.84
CSGALNACT1-204ENST00000517494 NBPF15Q8N660 670 aa20.28■□□□□ 0.84
CSGALNACT1-204ENST00000517494 MIS18AQ9NYP9 233 aa20.28■□□□□ 0.84
CSGALNACT1-204ENST00000517494 FKBP4Q02790 459 aaKnown RBP eCLIP20.27■□□□□ 0.84
CSGALNACT1-204ENST00000517494 EAPPQ56P03 285 aaPredicted RBP20.27■□□□□ 0.84
CSGALNACT1-204ENST00000517494 NGEFQ8N5V2 710 aa20.27■□□□□ 0.84
CSGALNACT1-204ENST00000517494 LDHDQ86WU2 507 aa20.26■□□□□ 0.83
CSGALNACT1-204ENST00000517494 C7orf43Q8WVR3 580 aa20.26■□□□□ 0.83
CSGALNACT1-204ENST00000517494 ZNF541Q9H0D2 1346 aa20.26■□□□□ 0.83
CSGALNACT1-204ENST00000517494 DICER1Q9UPY3 1922 aaKnown RBP20.25■□□□□ 0.83
CSGALNACT1-204ENST00000517494 HLFQ16534 295 aa20.25■□□□□ 0.83
CSGALNACT1-204ENST00000517494 TAF1DQ9H5J8 278 aaPredicted RBP20.25■□□□□ 0.83
CSGALNACT1-204ENST00000517494 CLEC11AQ9Y240 323 aa20.25■□□□□ 0.83
CSGALNACT1-204ENST00000517494 TAF7Q15545 349 aaPredicted RBP20.24■□□□□ 0.83
CSGALNACT1-204ENST00000517494 NEFMP07197 916 aa20.23■□□□□ 0.83
CSGALNACT1-204ENST00000517494 RTKN2Q8IZC4 609 aa20.23■□□□□ 0.83
CSGALNACT1-204ENST00000517494 L3MBTL3Q96JM7 780 aaPredicted RBP20.23■□□□□ 0.83
CSGALNACT1-204ENST00000517494 ARFGEF2Q9Y6D5 1785 aa20.23■□□□□ 0.83
CSGALNACT1-204ENST00000517494 KLRG2A4D1S0 409 aaPredicted RBP20.22■□□□□ 0.83
CSGALNACT1-204ENST00000517494 HTATSF1O43719 755 aaKnown RBP20.22■□□□□ 0.83
CSGALNACT1-204ENST00000517494 HACL1Q9UJ83 578 aa20.22■□□□□ 0.83
CSGALNACT1-204ENST00000517494 ALDH1B1P30837 517 aa20.21■□□□□ 0.83
CSGALNACT1-204ENST00000517494 IARSP41252 1262 aaKnown RBP20.21■□□□□ 0.83
CSGALNACT1-204ENST00000517494 NUTM1Q86Y26 1132 aa20.21■□□□□ 0.83
CSGALNACT1-204ENST00000517494 SYNE4Q8N205 404 aa20.21■□□□□ 0.83
CSGALNACT1-204ENST00000517494 RNF123Q5XPI4 1314 aa20.21■□□□□ 0.83
CSGALNACT1-204ENST00000517494 CNTNAP1P78357 1384 aa20.21■□□□□ 0.83
CSGALNACT1-204ENST00000517494 EPHX2P34913 555 aa20.2■□□□□ 0.82
CSGALNACT1-204ENST00000517494 KIF6Q6ZMV9 814 aa20.2■□□□□ 0.82
CSGALNACT1-204ENST00000517494 RRP7AQ9Y3A4 280 aaKnown RBP20.2■□□□□ 0.82
CSGALNACT1-204ENST00000517494 PASKQ96RG2 1323 aa20.2■□□□□ 0.82
CSGALNACT1-204ENST00000517494 ABCC12Q96J65 1359 aa20.2■□□□□ 0.82
CSGALNACT1-204ENST00000517494 RGL2O15211 777 aa20.19■□□□□ 0.82
CSGALNACT1-204ENST00000517494 GPTP24298 496 aa20.19■□□□□ 0.82
CSGALNACT1-204ENST00000517494 NYXQ9GZU5 481 aa20.19■□□□□ 0.82
CSGALNACT1-204ENST00000517494 TMEM88BA6NKF7 163 aa20.18■□□□□ 0.82
CSGALNACT1-204ENST00000517494 MYL6BP14649 208 aa20.18■□□□□ 0.82
CSGALNACT1-204ENST00000517494 JDP2Q8WYK2 163 aa20.18■□□□□ 0.82
CSGALNACT1-204ENST00000517494 RPGRQ92834 1020 aaKnown RBP20.18■□□□□ 0.82
CSGALNACT1-204ENST00000517494 AIDAQ96BJ3 306 aa20.18■□□□□ 0.82
CSGALNACT1-204ENST00000517494 GJA3Q9Y6H8 435 aa20.18■□□□□ 0.82
CSGALNACT1-204ENST00000517494 FOXN1O15353 648 aa20.17■□□□□ 0.82
CSGALNACT1-204ENST00000517494 MAP1SQ66K74 1059 aaPredicted RBP20.17■□□□□ 0.82
CSGALNACT1-204ENST00000517494 TTLL7Q6ZT98 887 aa20.17■□□□□ 0.82
CSGALNACT1-204ENST00000517494 PNISRQ8TF01 805 aaKnown RBP20.17■□□□□ 0.82
CSGALNACT1-204ENST00000517494 THUMPD2Q9BTF0 503 aaKnown RBP20.17■□□□□ 0.82
CSGALNACT1-204ENST00000517494 ZBTB3Q9H5J0 574 aa20.17■□□□□ 0.82
CSGALNACT1-204ENST00000517494 TCERG1O14776 1098 aaKnown RBP20.16■□□□□ 0.82
CSGALNACT1-204ENST00000517494 VEGFBP49765 207 aa20.16■□□□□ 0.82
CSGALNACT1-204ENST00000517494 PNMA8AQ86V59 439 aaPredicted RBP20.16■□□□□ 0.82
CSGALNACT1-204ENST00000517494 MAP3K15Q6ZN16 1313 aa20.16■□□□□ 0.82
CSGALNACT1-204ENST00000517494 ERVV-1B6SEH8 477 aa20.15■□□□□ 0.82
CSGALNACT1-204ENST00000517494 FZD9O00144 591 aa20.15■□□□□ 0.82
CSGALNACT1-204ENST00000517494 ITGBL1O95965 494 aaPredicted RBP20.15■□□□□ 0.82
CSGALNACT1-204ENST00000517494 EIF6P56537 245 aaKnown RBP20.15■□□□□ 0.82
CSGALNACT1-204ENST00000517494 GPC2Q8N158 579 aa20.15■□□□□ 0.82
CSGALNACT1-204ENST00000517494 SCN4AP35499 1836 aa20.15■□□□□ 0.82
CSGALNACT1-204ENST00000517494 EIF4A1P60842 406 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms