RNA–Protein interactions for RNA: ENST00000516483.1

RN7SKP238-201, Transcript of RNA, 7SK small nuclear pseudogene 238, humanhuman

BASIC

Gene RN7SKP238, Length 249 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP238-201ENST00000516483 ZBTB3Q9H5J0 574 aa8.01□□□□□ -1.13
RN7SKP238-201ENST00000516483 NMRK2Q9NPI5 230 aa8.01□□□□□ -1.13
RN7SKP238-201ENST00000516483 NIP7Q9Y221 180 aaKnown RBP eCLIP8.01□□□□□ -1.13
RN7SKP238-201ENST00000516483 BCORQ6W2J9 1755 aa8.01□□□□□ -1.13
RN7SKP238-201ENST00000516483 NRXN2Q9P2S2 1712 aa8□□□□□ -1.13
RN7SKP238-201ENST00000516483 LAMB4A4D0S4 1761 aa8□□□□□ -1.13
RN7SKP238-201ENST00000516483 KDM3BQ7LBC6 1761 aa8□□□□□ -1.13
RN7SKP238-201ENST00000516483 C21orf2O43822 256 aa8□□□□□ -1.13
RN7SKP238-201ENST00000516483 TMPOP42166 694 aaKnown RBP8□□□□□ -1.13
RN7SKP238-201ENST00000516483 EIF4A1P60842 406 aaKnown RBP8□□□□□ -1.13
RN7SKP238-201ENST00000516483 ST5P78524 1137 aa8□□□□□ -1.13
RN7SKP238-201ENST00000516483 PROSER3Q2NL68 480 aa8□□□□□ -1.13
RN7SKP238-201ENST00000516483 OLFM4Q6UX06 510 aa8□□□□□ -1.13
RN7SKP238-201ENST00000516483 TTLL7Q6ZT98 887 aa8□□□□□ -1.13
RN7SKP238-201ENST00000516483 NUTM1Q86Y26 1132 aa8□□□□□ -1.13
RN7SKP238-201ENST00000516483 TTLL6Q8N841 843 aa8□□□□□ -1.13
RN7SKP238-201ENST00000516483 ARFGEF1Q9Y6D6 1849 aa8□□□□□ -1.13
RN7SKP238-201ENST00000516483 GTF2E1P29083 439 aaPredicted RBP7.99□□□□□ -1.13
RN7SKP238-201ENST00000516483 PRELPP51888 382 aa7.99□□□□□ -1.13
RN7SKP238-201ENST00000516483 KIF6Q6ZMV9 814 aa7.99□□□□□ -1.13
RN7SKP238-201ENST00000516483 SLC51AQ86UW1 340 aa7.99□□□□□ -1.13
RN7SKP238-201ENST00000516483 PNNQ9H307 717 aaKnown RBP7.99□□□□□ -1.13
RN7SKP238-201ENST00000516483 PRKRIP1Q9H875 184 aaPredicted RBP7.99□□□□□ -1.13
RN7SKP238-201ENST00000516483 ADAMTS8Q9UP79 889 aa7.99□□□□□ -1.13
RN7SKP238-201ENST00000516483 ZNF652Q9Y2D9 606 aa7.99□□□□□ -1.13
RN7SKP238-201ENST00000516483 TCERG1O14776 1098 aaKnown RBP7.98□□□□□ -1.13
RN7SKP238-201ENST00000516483 KIF3CO14782 793 aa7.98□□□□□ -1.13
RN7SKP238-201ENST00000516483 PDE6BP35913 854 aa7.98□□□□□ -1.13
RN7SKP238-201ENST00000516483 AIMP1Q12904 312 aaKnown RBP7.98□□□□□ -1.13
RN7SKP238-201ENST00000516483 CCDC184Q52MB2 194 aa7.98□□□□□ -1.13
RN7SKP238-201ENST00000516483 PNISRQ8TF01 805 aaKnown RBP7.98□□□□□ -1.13
RN7SKP238-201ENST00000516483 BRIP1Q9BX63 1249 aa7.98□□□□□ -1.13
RN7SKP238-201ENST00000516483 ABCC12Q96J65 1359 aa7.97□□□□□ -1.13
RN7SKP238-201ENST00000516483 DLEC1Q9Y238 1755 aa7.97□□□□□ -1.13
RN7SKP238-201ENST00000516483 NFKBIEO00221 500 aa7.97□□□□□ -1.13
RN7SKP238-201ENST00000516483 PRPF40BQ6NWY9 871 aaKnown RBP7.97□□□□□ -1.13
RN7SKP238-201ENST00000516483 RUNDC1Q96C34 613 aa7.97□□□□□ -1.13
RN7SKP238-201ENST00000516483 RRAGCQ9HB90 399 aa7.97□□□□□ -1.13
RN7SKP238-201ENST00000516483 TRIM35Q9UPQ4 493 aa7.97□□□□□ -1.13
RN7SKP238-201ENST00000516483 TNRC6CQ9HCJ0 1690 aaKnown RBP7.97□□□□□ -1.13
RN7SKP238-201ENST00000516483 SLX4Q8IY92 1834 aa7.96□□□□□ -1.13
RN7SKP238-201ENST00000516483 SBF1O95248 1867 aa7.96□□□□□ -1.13
RN7SKP238-201ENST00000516483 APAF1O14727 1248 aa7.96□□□□□ -1.14
RN7SKP238-201ENST00000516483 HTRA3P83110 453 aa7.96□□□□□ -1.14
RN7SKP238-201ENST00000516483 LMOD3Q0VAK6 560 aa7.96□□□□□ -1.14
RN7SKP238-201ENST00000516483 ERFEQ4G0M1 354 aa7.96□□□□□ -1.14
RN7SKP238-201ENST00000516483 C16orf71Q8IYS4 520 aaPredicted RBP7.96□□□□□ -1.14
RN7SKP238-201ENST00000516483 MAP3K15Q6ZN16 1313 aa7.96□□□□□ -1.14
RN7SKP238-201ENST00000516483 UBN2Q6ZU65 1347 aa7.96□□□□□ -1.14
RN7SKP238-201ENST00000516483 CCDC88AQ3V6T2 1871 aa7.96□□□□□ -1.14
RN7SKP238-201ENST00000516483 TIAM2Q8IVF5 1701 aa7.95□□□□□ -1.14
RN7SKP238-201ENST00000516483 ELL2O00472 640 aaPredicted RBP7.95□□□□□ -1.14
RN7SKP238-201ENST00000516483 SRGNP10124 158 aa7.95□□□□□ -1.14
RN7SKP238-201ENST00000516483 LMNB1P20700 586 aa7.95□□□□□ -1.14
RN7SKP238-201ENST00000516483 CLEC4GQ6UXB4 293 aa7.95□□□□□ -1.14
RN7SKP238-201ENST00000516483 TPTE2Q6XPS3 522 aa7.95□□□□□ -1.14
RN7SKP238-201ENST00000516483 C3orf67Q6ZVT6 689 aa7.95□□□□□ -1.14
RN7SKP238-201ENST00000516483 XAGE3Q8WTP9 111 aa7.95□□□□□ -1.14
RN7SKP238-201ENST00000516483 MASTLQ96GX5 879 aa7.95□□□□□ -1.14
RN7SKP238-201ENST00000516483 TAOK3Q9H2K8 898 aa7.95□□□□□ -1.14
RN7SKP238-201ENST00000516483 CHPF2Q9P2E5 772 aa7.95□□□□□ -1.14
RN7SKP238-201ENST00000516483 SALL2Q9Y467 1007 aaPredicted RBP7.95□□□□□ -1.14
RN7SKP238-201ENST00000516483 NUP98P52948 1817 aa7.94□□□□□ -1.14
RN7SKP238-201ENST00000516483 PDIA6Q15084 440 aa7.94□□□□□ -1.14
RN7SKP238-201ENST00000516483 RTL5Q5HYW3 569 aaPredicted RBP7.94□□□□□ -1.14
RN7SKP238-201ENST00000516483 HDGFL1Q5TGJ6 251 aa7.94□□□□□ -1.14
RN7SKP238-201ENST00000516483 SUSD4Q5VX71 490 aa7.94□□□□□ -1.14
RN7SKP238-201ENST00000516483 COPS6Q7L5N1 327 aa7.94□□□□□ -1.14
RN7SKP238-201ENST00000516483 SYNE4Q8N205 404 aa7.94□□□□□ -1.14
RN7SKP238-201ENST00000516483 RPGRQ92834 1020 aaKnown RBP7.94□□□□□ -1.14
RN7SKP238-201ENST00000516483 CNKSR1Q969H4 720 aa7.94□□□□□ -1.14
RN7SKP238-201ENST00000516483 ZNF277Q9NRM2 450 aaPredicted RBP7.94□□□□□ -1.14
RN7SKP238-201ENST00000516483 KDM2BQ8NHM5 1336 aa7.94□□□□□ -1.14
RN7SKP238-201ENST00000516483 NPR1P16066 1061 aa7.93□□□□□ -1.14
RN7SKP238-201ENST00000516483 HSPA6P17066 643 aa7.93□□□□□ -1.14
RN7SKP238-201ENST00000516483 STYK1Q6J9G0 422 aa7.93□□□□□ -1.14
RN7SKP238-201ENST00000516483 MBIPQ9NS73 344 aa7.93□□□□□ -1.14
RN7SKP238-201ENST00000516483 ERVV-1B6SEH8 477 aa7.92□□□□□ -1.14
RN7SKP238-201ENST00000516483 ATP5J2-PTCD1G3V325 749 aa7.92□□□□□ -1.14
RN7SKP238-201ENST00000516483 CHL1O00533 1208 aa7.92□□□□□ -1.14
RN7SKP238-201ENST00000516483 TOMM70O94826 608 aa7.92□□□□□ -1.14
RN7SKP238-201ENST00000516483 HCLS1P14317 486 aaPredicted RBP7.92□□□□□ -1.14
RN7SKP238-201ENST00000516483 CCDC93Q567U6 631 aa7.92□□□□□ -1.14
RN7SKP238-201ENST00000516483 DUSP27Q5VZP5 1158 aa7.92□□□□□ -1.14
RN7SKP238-201ENST00000516483 LRP10Q7Z4F1 713 aa7.92□□□□□ -1.14
RN7SKP238-201ENST00000516483 TSR2Q969E8 191 aaKnown RBP7.92□□□□□ -1.14
RN7SKP238-201ENST00000516483 NYXQ9GZU5 481 aa7.92□□□□□ -1.14
RN7SKP238-201ENST00000516483 MRS2Q9HD23 443 aa7.92□□□□□ -1.14
RN7SKP238-201ENST00000516483 FER1L6Q2WGJ9 1857 aa7.92□□□□□ -1.14
RN7SKP238-201ENST00000516483 ZNF316A6NFI3 1004 aaPredicted RBP7.91□□□□□ -1.14
RN7SKP238-201ENST00000516483 DDNO94850 711 aaPredicted RBP7.91□□□□□ -1.14
RN7SKP238-201ENST00000516483 NTSR2O95665 410 aa7.91□□□□□ -1.14
RN7SKP238-201ENST00000516483 ZEB1P37275 1124 aaPredicted RBP7.91□□□□□ -1.14
RN7SKP238-201ENST00000516483 GIGYF2Q6Y7W6 1299 aaKnown RBP7.91□□□□□ -1.14
RN7SKP238-201ENST00000516483 ZNF34Q8IZ26 560 aa7.91□□□□□ -1.14
RN7SKP238-201ENST00000516483 UTP14AQ9BVJ6 771 aaKnown RBP7.91□□□□□ -1.14
RN7SKP238-201ENST00000516483 ZNF541Q9H0D2 1346 aa7.91□□□□□ -1.14
RN7SKP238-201ENST00000516483 ARFGEF2Q9Y6D5 1785 aa7.9□□□□□ -1.14
RN7SKP238-201ENST00000516483 ERBB4Q15303 1308 aa7.9□□□□□ -1.14
RN7SKP238-201ENST00000516483 GLTPD2A6NH11 291 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms