RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 PRR5LQ6MZQ0 368 aa16.52■□□□□ 0.24
SMAD5-210ENST00000515005 ZBTB1Q9Y2K1 713 aa16.52■□□□□ 0.24
SMAD5-210ENST00000515005 TRAF5O00463 557 aa16.51■□□□□ 0.23
SMAD5-210ENST00000515005 PLEKHO1Q53GL0 409 aaPredicted RBP16.51■□□□□ 0.23
SMAD5-210ENST00000515005 ZNF277Q9NRM2 450 aaPredicted RBP16.51■□□□□ 0.23
SMAD5-210ENST00000515005 ARFGEF2Q9Y6D5 1785 aa16.51■□□□□ 0.23
SMAD5-210ENST00000515005 EIF4A2Q14240 407 aaKnown RBP16.5■□□□□ 0.23
SMAD5-210ENST00000515005 TBC1D9BQ66K14 1250 aa16.5■□□□□ 0.23
SMAD5-210ENST00000515005 STYK1Q6J9G0 422 aa16.5■□□□□ 0.23
SMAD5-210ENST00000515005 SRGNP10124 158 aa16.49■□□□□ 0.23
SMAD5-210ENST00000515005 BRPF1P55201 1214 aaPredicted RBP16.49■□□□□ 0.23
SMAD5-210ENST00000515005 C7orf43Q8WVR3 580 aa16.49■□□□□ 0.23
SMAD5-210ENST00000515005 CIAPIN1Q6FI81 312 aa16.48■□□□□ 0.23
SMAD5-210ENST00000515005 FZD9O00144 591 aa16.47■□□□□ 0.23
SMAD5-210ENST00000515005 FKBP4Q02790 459 aaKnown RBP eCLIP16.47■□□□□ 0.23
SMAD5-210ENST00000515005 CCDC93Q567U6 631 aa16.47■□□□□ 0.23
SMAD5-210ENST00000515005 SAPCD2Q86UD0 394 aa16.47■□□□□ 0.23
SMAD5-210ENST00000515005 GPC2Q8N158 579 aa16.47■□□□□ 0.23
SMAD5-210ENST00000515005 CARD14Q9BXL6 1004 aa16.47■□□□□ 0.23
SMAD5-210ENST00000515005 POLKQ9UBT6 870 aa16.47■□□□□ 0.23
SMAD5-210ENST00000515005 CANXP27824 592 aaKnown RBP16.46■□□□□ 0.23
SMAD5-210ENST00000515005 MASTLQ96GX5 879 aa16.46■□□□□ 0.23
SMAD5-210ENST00000515005 AMOTQ4VCS5 1084 aa16.45■□□□□ 0.22
SMAD5-210ENST00000515005 C1orf141Q5JVX7 400 aa16.45■□□□□ 0.22
SMAD5-210ENST00000515005 OLFM4Q6UX06 510 aa16.45■□□□□ 0.22
SMAD5-210ENST00000515005 SCN11AQ9UI33 1791 aa16.45■□□□□ 0.22
SMAD5-210ENST00000515005 EPS15P42566 896 aa16.44■□□□□ 0.22
SMAD5-210ENST00000515005 SLC39A6Q13433 755 aa16.44■□□□□ 0.22
SMAD5-210ENST00000515005 ZIC5Q96T25 663 aa16.44■□□□□ 0.22
SMAD5-210ENST00000515005 IARSP41252 1262 aaKnown RBP16.43■□□□□ 0.22
SMAD5-210ENST00000515005 CNBD1Q8NA66 436 aa16.43■□□□□ 0.22
SMAD5-210ENST00000515005 GCC1Q96CN9 775 aa16.43■□□□□ 0.22
SMAD5-210ENST00000515005 GJA3Q9Y6H8 435 aa16.43■□□□□ 0.22
SMAD5-210ENST00000515005 CELF2O95319 508 aaKnown RBP16.42■□□□□ 0.22
SMAD5-210ENST00000515005 LMOD1P29536 600 aaPredicted RBP16.42■□□□□ 0.22
SMAD5-210ENST00000515005 EIF5P55010 431 aaKnown RBP16.42■□□□□ 0.22
SMAD5-210ENST00000515005 HABP4Q5JVS0 413 aaKnown RBP16.42■□□□□ 0.22
SMAD5-210ENST00000515005 NPHP1O15259 732 aa16.41■□□□□ 0.22
SMAD5-210ENST00000515005 SCNN1DP51172 638 aa16.41■□□□□ 0.22
SMAD5-210ENST00000515005 SYNE4Q8N205 404 aa16.41■□□□□ 0.22
SMAD5-210ENST00000515005 HHIPL1Q96JK4 782 aa16.41■□□□□ 0.22
SMAD5-210ENST00000515005 SCN7AQ01118 1682 aa16.4■□□□□ 0.22
SMAD5-210ENST00000515005 A0A087WZG4 1122 aa16.4■□□□□ 0.22
SMAD5-210ENST00000515005 SLC24A1O60721 1099 aa16.4■□□□□ 0.22
SMAD5-210ENST00000515005 ST5P78524 1137 aa16.4■□□□□ 0.22
SMAD5-210ENST00000515005 AEBP1Q8IUX7 1158 aa16.4■□□□□ 0.22
SMAD5-210ENST00000515005 TBC1D2BQ9UPU7 963 aa16.4■□□□□ 0.22
SMAD5-210ENST00000515005 USP50Q70EL3 339 aaPredicted RBP16.39■□□□□ 0.21
SMAD5-210ENST00000515005 RTKN2Q8IZC4 609 aa16.39■□□□□ 0.21
SMAD5-210ENST00000515005 NBPF15Q8N660 670 aa16.39■□□□□ 0.21
SMAD5-210ENST00000515005 SETDB2Q96T68 719 aa16.39■□□□□ 0.21
SMAD5-210ENST00000515005 SLC52A2Q9HAB3 445 aa16.39■□□□□ 0.21
SMAD5-210ENST00000515005 COL4A5P29400 1685 aa16.39■□□□□ 0.21
SMAD5-210ENST00000515005 EIF6P56537 245 aaKnown RBP16.38■□□□□ 0.21
SMAD5-210ENST00000515005 JDP2Q8WYK2 163 aa16.38■□□□□ 0.21
SMAD5-210ENST00000515005 LGR6Q9HBX8 967 aa16.38■□□□□ 0.21
SMAD5-210ENST00000515005 BCORQ6W2J9 1755 aa16.38■□□□□ 0.21
SMAD5-210ENST00000515005 NPR1P16066 1061 aa16.37■□□□□ 0.21
SMAD5-210ENST00000515005 TNNT2P45379 298 aaPredicted RBP16.37■□□□□ 0.21
SMAD5-210ENST00000515005 NOGQ13253 232 aa16.37■□□□□ 0.21
SMAD5-210ENST00000515005 VSIG10Q8N0Z9 540 aa16.36■□□□□ 0.21
SMAD5-210ENST00000515005 GLIS2Q9BZE0 524 aaPredicted RBP16.36■□□□□ 0.21
SMAD5-210ENST00000515005 ZNF408Q9H9D4 720 aa16.36■□□□□ 0.21
SMAD5-210ENST00000515005 ZNF330Q9Y3S2 320 aaPredicted RBP16.36■□□□□ 0.21
SMAD5-210ENST00000515005 STARD3NLO95772 234 aa16.34■□□□□ 0.21
SMAD5-210ENST00000515005 CTU1Q7Z7A3 348 aaKnown RBP16.34■□□□□ 0.21
SMAD5-210ENST00000515005 HPS5Q9UPZ3 1129 aa16.34■□□□□ 0.21
SMAD5-210ENST00000515005 SAGE1Q9NXZ1 904 aa16.33■□□□□ 0.2
SMAD5-210ENST00000515005 SNED1Q8TER0 1413 aa16.33■□□□□ 0.2
SMAD5-210ENST00000515005 MRC1P22897 1456 aa16.33■□□□□ 0.2
SMAD5-210ENST00000515005 AKAP11Q9UKA4 1901 aa16.33■□□□□ 0.2
SMAD5-210ENST00000515005 KLRG2A4D1S0 409 aaPredicted RBP16.32■□□□□ 0.2
SMAD5-210ENST00000515005 TRPA1O75762 1119 aa16.32■□□□□ 0.2
SMAD5-210ENST00000515005 CAMTA2O94983 1202 aa16.32■□□□□ 0.2
SMAD5-210ENST00000515005 FXR1P51114 621 aaKnown RBP eCLIP16.32■□□□□ 0.2
SMAD5-210ENST00000515005 UBR2Q8IWV8 1755 aa16.32■□□□□ 0.2
SMAD5-210ENST00000515005 PSMD1Q99460 953 aa16.32■□□□□ 0.2
SMAD5-210ENST00000515005 RNF186Q9NXI6 227 aa16.32■□□□□ 0.2
SMAD5-210ENST00000515005 RNMTO43148 476 aaKnown RBP16.31■□□□□ 0.2
SMAD5-210ENST00000515005 AKAP4Q5JQC9 854 aa16.31■□□□□ 0.2
SMAD5-210ENST00000515005 SULT6B1Q6IMI4 303 aa16.31■□□□□ 0.2
SMAD5-210ENST00000515005 NBPF5PQ86XG9 351 aaPredicted RBP16.31■□□□□ 0.2
SMAD5-210ENST00000515005 ADARB2Q9NS39 739 aaKnown RBP16.31■□□□□ 0.2
SMAD5-210ENST00000515005 FAM155AB1AL88 458 aaPredicted RBP16.3■□□□□ 0.2
SMAD5-210ENST00000515005 HUNKP57058 714 aa16.3■□□□□ 0.2
SMAD5-210ENST00000515005 GPRC5DQ9NZD1 345 aa16.3■□□□□ 0.2
SMAD5-210ENST00000515005 IL6STP40189 918 aaPredicted RBP16.29■□□□□ 0.2
SMAD5-210ENST00000515005 KIF23Q02241 960 aaPredicted RBP16.29■□□□□ 0.2
SMAD5-210ENST00000515005 LARGE2Q8N3Y3 721 aa16.28■□□□□ 0.2
SMAD5-210ENST00000515005 PGAP2Q9UHJ9 254 aa16.28■□□□□ 0.2
SMAD5-210ENST00000515005 ALDH1B1P30837 517 aa16.27■□□□□ 0.2
SMAD5-210ENST00000515005 DLK2Q6UY11 383 aa16.27■□□□□ 0.2
SMAD5-210ENST00000515005 DLL1O00548 723 aa16.26■□□□□ 0.19
SMAD5-210ENST00000515005 A1BGP04217 495 aa16.26■□□□□ 0.19
SMAD5-210ENST00000515005 CDCA8Q53HL2 280 aa16.26■□□□□ 0.19
SMAD5-210ENST00000515005 RGMBQ6NW40 437 aa16.26■□□□□ 0.19
SMAD5-210ENST00000515005 HIRAP54198 1017 aaPredicted RBP16.25■□□□□ 0.19
SMAD5-210ENST00000515005 CDC37L1Q7L3B6 337 aa16.25■□□□□ 0.19
SMAD5-210ENST00000515005 DZIP3Q86Y13 1208 aaKnown RBP16.25■□□□□ 0.19
SMAD5-210ENST00000515005 ZNF496Q96IT1 587 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms