RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 ST5P78524 1137 aa16.22■□□□□ 0.19
SNHG4-208ENST00000514110 DNAJC5GQ8N7S2 189 aa16.22■□□□□ 0.19
SNHG4-208ENST00000514110 GLTPD2A6NH11 291 aa16.21■□□□□ 0.19
SNHG4-208ENST00000514110 CLEC4GQ6UXB4 293 aa16.21■□□□□ 0.19
SNHG4-208ENST00000514110 WDR90Q96KV7 1748 aa16.2■□□□□ 0.18
SNHG4-208ENST00000514110 SLX4Q8IY92 1834 aa16.2■□□□□ 0.18
SNHG4-208ENST00000514110 SRGNP10124 158 aa16.2■□□□□ 0.18
SNHG4-208ENST00000514110 FSTL1Q12841 308 aa16.2■□□□□ 0.18
SNHG4-208ENST00000514110 NBPF5PQ86XG9 351 aaPredicted RBP16.2■□□□□ 0.18
SNHG4-208ENST00000514110 ZNF652Q9Y2D9 606 aa16.2■□□□□ 0.18
SNHG4-208ENST00000514110 LAMB4A4D0S4 1761 aa16.2■□□□□ 0.18
SNHG4-208ENST00000514110 KDM3BQ7LBC6 1761 aa16.2■□□□□ 0.18
SNHG4-208ENST00000514110 FER1L6Q2WGJ9 1857 aa16.2■□□□□ 0.18
SNHG4-208ENST00000514110 CACNA1SQ13698 1873 aa16.19■□□□□ 0.18
SNHG4-208ENST00000514110 NEFMP07197 916 aa16.19■□□□□ 0.18
SNHG4-208ENST00000514110 NFE2L2Q16236 605 aa16.19■□□□□ 0.18
SNHG4-208ENST00000514110 STYK1Q6J9G0 422 aa16.19■□□□□ 0.18
SNHG4-208ENST00000514110 THUMPD2Q9BTF0 503 aaKnown RBP16.19■□□□□ 0.18
SNHG4-208ENST00000514110 HTRA3P83110 453 aa16.18■□□□□ 0.18
SNHG4-208ENST00000514110 HLFQ16534 295 aa16.18■□□□□ 0.18
SNHG4-208ENST00000514110 PRPF40BQ6NWY9 871 aaKnown RBP16.18■□□□□ 0.18
SNHG4-208ENST00000514110 CNKSR1Q969H4 720 aa16.18■□□□□ 0.18
SNHG4-208ENST00000514110 MASTLQ96GX5 879 aa16.18■□□□□ 0.18
SNHG4-208ENST00000514110 NIP7Q9Y221 180 aaKnown RBP eCLIP16.18■□□□□ 0.181e-323■■□□□ 14.4
SNHG4-208ENST00000514110 ARFGEF2Q9Y6D5 1785 aa16.18■□□□□ 0.18
SNHG4-208ENST00000514110 VEGFAP15692 232 aaPredicted RBP16.17■□□□□ 0.18
SNHG4-208ENST00000514110 EIF4A1P60842 406 aaKnown RBP16.17■□□□□ 0.18
SNHG4-208ENST00000514110 PNISRQ8TF01 805 aaKnown RBP16.17■□□□□ 0.18
SNHG4-208ENST00000514110 DICER1Q9UPY3 1922 aaKnown RBP16.16■□□□□ 0.18
SNHG4-208ENST00000514110 FAM177BA6PVY3 158 aa16.16■□□□□ 0.18
SNHG4-208ENST00000514110 RGL2O15211 777 aa16.16■□□□□ 0.18
SNHG4-208ENST00000514110 ERFEQ4G0M1 354 aa16.16■□□□□ 0.18
SNHG4-208ENST00000514110 SMC1BQ8NDV3 1235 aa16.16■□□□□ 0.18
SNHG4-208ENST00000514110 TAOK3Q9H2K8 898 aa16.16■□□□□ 0.18
SNHG4-208ENST00000514110 LTBP3Q9NS15 1303 aa16.16■□□□□ 0.18
SNHG4-208ENST00000514110 KLRG2A4D1S0 409 aaPredicted RBP16.15■□□□□ 0.18
SNHG4-208ENST00000514110 POTECB2RU33 542 aa16.15■□□□□ 0.18
SNHG4-208ENST00000514110 TPTE2Q6XPS3 522 aa16.15■□□□□ 0.18
SNHG4-208ENST00000514110 NGEFQ8N5V2 710 aa16.15■□□□□ 0.18
SNHG4-208ENST00000514110 MAPK8IP3Q9UPT6 1336 aa16.15■□□□□ 0.18
SNHG4-208ENST00000514110 NPR1P16066 1061 aa16.14■□□□□ 0.17
SNHG4-208ENST00000514110 IFFO2Q5TF58 517 aa16.14■□□□□ 0.17
SNHG4-208ENST00000514110 DPY19L2Q6NUT2 758 aa16.14■□□□□ 0.17
SNHG4-208ENST00000514110 C7orf43Q8WVR3 580 aa16.14■□□□□ 0.17
SNHG4-208ENST00000514110 RRP7AQ9Y3A4 280 aaKnown RBP16.14■□□□□ 0.17
SNHG4-208ENST00000514110 SOGA3Q5TF21 947 aa16.13■□□□□ 0.17
SNHG4-208ENST00000514110 TTLL7Q6ZT98 887 aa16.13■□□□□ 0.17
SNHG4-208ENST00000514110 PNNQ9H307 717 aaKnown RBP16.13■□□□□ 0.17
SNHG4-208ENST00000514110 ERVV-1B6SEH8 477 aa16.12■□□□□ 0.17
SNHG4-208ENST00000514110 MYL6BP14649 208 aa16.12■□□□□ 0.17
SNHG4-208ENST00000514110 OLFM4Q6UX06 510 aa16.12■□□□□ 0.17
SNHG4-208ENST00000514110 KLRG1Q96E93 195 aa16.12■□□□□ 0.17
SNHG4-208ENST00000514110 MAP3K15Q6ZN16 1313 aa16.12■□□□□ 0.17
SNHG4-208ENST00000514110 NUP98P52948 1817 aa16.12■□□□□ 0.17
SNHG4-208ENST00000514110 RALBP1Q15311 655 aa16.11■□□□□ 0.17
SNHG4-208ENST00000514110 DDNO94850 711 aaPredicted RBP16.1■□□□□ 0.17
SNHG4-208ENST00000514110 GTF2E1P29083 439 aaPredicted RBP16.1■□□□□ 0.17
SNHG4-208ENST00000514110 RIPK4P57078 832 aa16.1■□□□□ 0.17
SNHG4-208ENST00000514110 CCDC93Q567U6 631 aa16.1■□□□□ 0.17
SNHG4-208ENST00000514110 KIF6Q6ZMV9 814 aa16.1■□□□□ 0.17
SNHG4-208ENST00000514110 NUTM1Q86Y26 1132 aa16.1■□□□□ 0.17
SNHG4-208ENST00000514110 ABCC12Q96J65 1359 aa16.1■□□□□ 0.17
SNHG4-208ENST00000514110 ZBTB3Q9H5J0 574 aa16.09■□□□□ 0.17
SNHG4-208ENST00000514110 TSPYL4Q9UJ04 414 aa16.09■□□□□ 0.17
SNHG4-208ENST00000514110 UBN2Q6ZU65 1347 aa16.09■□□□□ 0.17
SNHG4-208ENST00000514110 GPTP24298 496 aa16.08■□□□□ 0.16
SNHG4-208ENST00000514110 ALDH1B1P30837 517 aa16.08■□□□□ 0.16
SNHG4-208ENST00000514110 FKBP4Q02790 459 aaKnown RBP eCLIP16.08■□□□□ 0.16
SNHG4-208ENST00000514110 DDX10Q13206 875 aaKnown RBP16.08■□□□□ 0.16
SNHG4-208ENST00000514110 JMYQ8N9B5 988 aa16.08■□□□□ 0.16
SNHG4-208ENST00000514110 NYXQ9GZU5 481 aa16.08■□□□□ 0.16
SNHG4-208ENST00000514110 ZNF277Q9NRM2 450 aaPredicted RBP16.08■□□□□ 0.16
SNHG4-208ENST00000514110 TMPOP42166 694 aaKnown RBP16.07■□□□□ 0.16
SNHG4-208ENST00000514110 PDIA6Q15084 440 aa16.07■□□□□ 0.16
SNHG4-208ENST00000514110 CRY2Q49AN0 593 aa16.07■□□□□ 0.16
SNHG4-208ENST00000514110 SUSD4Q5VX71 490 aa16.07■□□□□ 0.16
SNHG4-208ENST00000514110 LRP10Q7Z4F1 713 aa16.07■□□□□ 0.16
SNHG4-208ENST00000514110 ZNF34Q8IZ26 560 aa16.07■□□□□ 0.16
SNHG4-208ENST00000514110 IBTKQ9P2D0 1353 aaPredicted RBP16.06■□□□□ 0.16
SNHG4-208ENST00000514110 ERBB4Q15303 1308 aa16.06■□□□□ 0.16
SNHG4-208ENST00000514110 POTEIP0CG38 1075 aa16.06■□□□□ 0.16
SNHG4-208ENST00000514110 POTEJP0CG39 1038 aa16.06■□□□□ 0.16
SNHG4-208ENST00000514110 EIF2S2P20042 333 aaKnown RBP16.06■□□□□ 0.16
SNHG4-208ENST00000514110 RTKN2Q8IZC4 609 aa16.06■□□□□ 0.16
SNHG4-208ENST00000514110 SNED1Q8TER0 1413 aa16.05■□□□□ 0.16
SNHG4-208ENST00000514110 MYBBP1AQ9BQG0 1328 aaKnown RBP16.05■□□□□ 0.16
SNHG4-208ENST00000514110 ZNF541Q9H0D2 1346 aa16.05■□□□□ 0.16
SNHG4-208ENST00000514110 PROSER3Q2NL68 480 aa16.05■□□□□ 0.16
SNHG4-208ENST00000514110 GIGYF2Q6Y7W6 1299 aaKnown RBP16.05■□□□□ 0.16
SNHG4-208ENST00000514110 CCDC146Q8IYE0 955 aa16.05■□□□□ 0.16
SNHG4-208ENST00000514110 RIC1Q4ADV7 1423 aa16.04■□□□□ 0.16
SNHG4-208ENST00000514110 NTSR2O95665 410 aa16.04■□□□□ 0.16
SNHG4-208ENST00000514110 ANXA1P04083 346 aa16.04■□□□□ 0.16
SNHG4-208ENST00000514110 SYNE4Q8N205 404 aa16.04■□□□□ 0.16
SNHG4-208ENST00000514110 L3MBTL3Q96JM7 780 aaPredicted RBP16.04■□□□□ 0.16
SNHG4-208ENST00000514110 BABAM1Q9NWV8 329 aa16.04■□□□□ 0.16
SNHG4-208ENST00000514110 HOXA10P31260 410 aaPredicted RBP16.03■□□□□ 0.16
SNHG4-208ENST00000514110 IARSP41252 1262 aaKnown RBP16.03■□□□□ 0.16
SNHG4-208ENST00000514110 LMOD3Q0VAK6 560 aa16.03■□□□□ 0.16
SNHG4-208ENST00000514110 NEUROD2Q15784 382 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms