RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 SLU7O95391 586 aaKnown RBP9.61□□□□□ -0.87
HTT-208ENST00000510626 KRT83P78385 493 aa9.61□□□□□ -0.87
HTT-208ENST00000510626 ANKRD62A6NC57 917 aa9.61□□□□□ -0.87
HTT-208ENST00000510626 TDRD9Q8NDG6 1382 aaKnown RBP9.61□□□□□ -0.87
HTT-208ENST00000510626 NBPF7P0C2Y1 421 aaPredicted RBP9.61□□□□□ -0.87
HTT-208ENST00000510626 KIF5BP33176 963 aa9.61□□□□□ -0.87
HTT-208ENST00000510626 RARSP54136 660 aaKnown RBP9.61□□□□□ -0.87
HTT-208ENST00000510626 SKILP12757 684 aa9.6□□□□□ -0.87
HTT-208ENST00000510626 CEBPZQ03701 1054 aaKnown RBP9.6□□□□□ -0.87
HTT-208ENST00000510626 GBP6Q6ZN66 633 aa9.6□□□□□ -0.87
HTT-208ENST00000510626 FAM76AQ8TAV0 307 aa9.6□□□□□ -0.87
HTT-208ENST00000510626 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.6□□□□□ -0.87
HTT-208ENST00000510626 HDGFL1Q5TGJ6 251 aa9.6□□□□□ -0.87
HTT-208ENST00000510626 RAI14Q9P0K7 980 aa9.6□□□□□ -0.87
HTT-208ENST00000510626 CCDC110Q8TBZ0 833 aa9.6□□□□□ -0.87
HTT-208ENST00000510626 KIF4AO95239 1232 aa9.6□□□□□ -0.87
HTT-208ENST00000510626 HOMEZQ8IX15 550 aa9.6□□□□□ -0.87
HTT-208ENST00000510626 FERP16591 822 aa9.6□□□□□ -0.87
HTT-208ENST00000510626 EIF2AK4Q9P2K8 1649 aaKnown RBP9.6□□□□□ -0.87
HTT-208ENST00000510626 GSTTP1A0A1W2PQM5 241 aa9.6□□□□□ -0.87
HTT-208ENST00000510626 NBPF11Q86T75 865 aa9.6□□□□□ -0.87
HTT-208ENST00000510626 EIF3DO15371 548 aaKnown RBP eCLIP9.6□□□□□ -0.872e-7■□□□□ 8.2
HTT-208ENST00000510626 CYLC1P35663 651 aaPredicted RBP9.6□□□□□ -0.87
HTT-208ENST00000510626 SEPT14Q6ZU15 432 aa9.6□□□□□ -0.87
HTT-208ENST00000510626 TTC21AQ8NDW8 1320 aa9.6□□□□□ -0.87
HTT-208ENST00000510626 GNG11P61952 73 aa9.6□□□□□ -0.87
HTT-208ENST00000510626 EVI5LQ96CN4 794 aa9.6□□□□□ -0.87
HTT-208ENST00000510626 CUL7Q14999 1698 aa9.6□□□□□ -0.87
HTT-208ENST00000510626 GPATCH11Q8N954 259 aa9.6□□□□□ -0.87
HTT-208ENST00000510626 CAPN2P17655 700 aa9.59□□□□□ -0.87
HTT-208ENST00000510626 CCDC129Q6ZRS4 1044 aa9.59□□□□□ -0.87
HTT-208ENST00000510626 RNF168Q8IYW5 571 aaPredicted RBP9.59□□□□□ -0.87
HTT-208ENST00000510626 SLC52A1Q9NWF4 448 aa9.59□□□□□ -0.87
HTT-208ENST00000510626 NAP1L3Q99457 506 aaPredicted RBP9.59□□□□□ -0.87
HTT-208ENST00000510626 TACC1O75410 805 aa9.59□□□□□ -0.87
HTT-208ENST00000510626 TMC6Q7Z403 805 aa9.59□□□□□ -0.87
HTT-208ENST00000510626 FAM177A1Q8N128 213 aaPredicted RBP9.59□□□□□ -0.87
HTT-208ENST00000510626 TRIM14Q14142 442 aa9.59□□□□□ -0.87
HTT-208ENST00000510626 RAB3GAP1Q15042 981 aa9.59□□□□□ -0.87
HTT-208ENST00000510626 TMEM266Q2M3C6 531 aa9.59□□□□□ -0.87
HTT-208ENST00000510626 SPECC1Q5M775 1068 aa9.59□□□□□ -0.87
HTT-208ENST00000510626 OTUD6BQ8N6M0 293 aa9.59□□□□□ -0.87
HTT-208ENST00000510626 ERO1AQ96HE7 468 aa9.59□□□□□ -0.87
HTT-208ENST00000510626 MYCBPQ99417 103 aaPredicted RBP9.59□□□□□ -0.87
HTT-208ENST00000510626 ZFYP08048 801 aaPredicted RBP9.59□□□□□ -0.87
HTT-208ENST00000510626 TNIP1Q15025 636 aa9.59□□□□□ -0.87
HTT-208ENST00000510626 CAMK4Q16566 473 aa9.59□□□□□ -0.87
HTT-208ENST00000510626 BCCIPQ9P287 314 aaKnown RBP eCLIP9.59□□□□□ -0.87
HTT-208ENST00000510626 PSME1Q06323 249 aa9.59□□□□□ -0.87
HTT-208ENST00000510626 NFE2L2Q16236 605 aa9.59□□□□□ -0.87
HTT-208ENST00000510626 VCXQ9H320 206 aa9.59□□□□□ -0.87
HTT-208ENST00000510626 RASSF2P50749 326 aa9.59□□□□□ -0.87
HTT-208ENST00000510626 PPP2R5EQ16537 467 aa9.59□□□□□ -0.87
HTT-208ENST00000510626 IKBKGQ9Y6K9 419 aa9.58□□□□□ -0.88
HTT-208ENST00000510626 FANCD2Q9BXW9 1451 aa9.58□□□□□ -0.88
HTT-208ENST00000510626 NUCB1Q02818 461 aa9.58□□□□□ -0.88
HTT-208ENST00000510626 FBF1Q8TES7 1133 aa9.58□□□□□ -0.88
HTT-208ENST00000510626 MINK1Q8N4C8 1332 aaPredicted RBP9.58□□□□□ -0.88
HTT-208ENST00000510626 TOP2BQ02880 1626 aa9.58□□□□□ -0.88
HTT-208ENST00000510626 IPO4Q8TEX9 1081 aaKnown RBP9.58□□□□□ -0.88
HTT-208ENST00000510626 ANKRD24Q8TF21 1146 aa9.58□□□□□ -0.88
HTT-208ENST00000510626 TICAM2Q86XR7 235 aa9.58□□□□□ -0.88
HTT-208ENST00000510626 EVA1CP58658 441 aa9.58□□□□□ -0.88
HTT-208ENST00000510626 LMNTD2Q8IXW0 634 aa9.58□□□□□ -0.88
HTT-208ENST00000510626 ZNF526Q8TF50 670 aaPredicted RBP9.58□□□□□ -0.88
HTT-208ENST00000510626 IMPACTQ9P2X3 320 aa9.58□□□□□ -0.88
HTT-208ENST00000510626 BCAR3O75815 825 aa9.58□□□□□ -0.88
HTT-208ENST00000510626 MAATS1Q7Z4T9 603 aa9.58□□□□□ -0.88
HTT-208ENST00000510626 SAMD15Q9P1V8 674 aa9.58□□□□□ -0.88
HTT-208ENST00000510626 PPP1R1BQ9UD71 204 aaPredicted RBP9.58□□□□□ -0.88
HTT-208ENST00000510626 KIF21AQ7Z4S6 1674 aa9.58□□□□□ -0.88
HTT-208ENST00000510626 CWC27Q6UX04 472 aaKnown RBP9.58□□□□□ -0.88
HTT-208ENST00000510626 LACTBP83111 547 aaPredicted RBP9.58□□□□□ -0.88
HTT-208ENST00000510626 PPP1R2P41236 205 aa9.57□□□□□ -0.88
HTT-208ENST00000510626 RBM27Q9P2N5 1060 aaKnown RBP9.57□□□□□ -0.88
HTT-208ENST00000510626 NOL3O60936 208 aaKnown RBP9.57□□□□□ -0.88
HTT-208ENST00000510626 MAP3K9P80192 1104 aa9.57□□□□□ -0.88
HTT-208ENST00000510626 TTC22Q5TAA0 569 aa9.57□□□□□ -0.88
HTT-208ENST00000510626 CACNA2D4Q7Z3S7 1137 aa9.57□□□□□ -0.88
HTT-208ENST00000510626 HLTFQ14527 1009 aaKnown RBP eCLIP9.57□□□□□ -0.88
HTT-208ENST00000510626 RPAINQ86UA6 219 aa9.57□□□□□ -0.88
HTT-208ENST00000510626 RSPH14Q9UHP6 348 aa9.57□□□□□ -0.88
HTT-208ENST00000510626 SLC8A1P32418 973 aa9.57□□□□□ -0.88
HTT-208ENST00000510626 TMPOP42166 694 aaKnown RBP9.57□□□□□ -0.88
HTT-208ENST00000510626 FAM114A2Q9NRY5 505 aa9.57□□□□□ -0.88
HTT-208ENST00000510626 CEP126Q9P2H0 1117 aa9.57□□□□□ -0.88
HTT-208ENST00000510626 HDAC9Q9UKV0 1011 aa9.57□□□□□ -0.88
HTT-208ENST00000510626 ERCC3P19447 782 aa9.57□□□□□ -0.88
HTT-208ENST00000510626 TTF1Q15361 905 aaPredicted RBP9.57□□□□□ -0.88
HTT-208ENST00000510626 TSNAXIP1Q2TAA8 658 aa9.57□□□□□ -0.88
HTT-208ENST00000510626 CNNM3Q8NE01 707 aa9.57□□□□□ -0.88
HTT-208ENST00000510626 SETDB1Q15047 1291 aa9.57□□□□□ -0.88
HTT-208ENST00000510626 SKIDA1Q1XH10 827 aa9.57□□□□□ -0.88
HTT-208ENST00000510626 TBC1D9Q6ZT07 1266 aa9.57□□□□□ -0.88
HTT-208ENST00000510626 USP37Q86T82 979 aa9.57□□□□□ -0.88
HTT-208ENST00000510626 FSIP1Q8NA03 581 aa9.57□□□□□ -0.88
HTT-208ENST00000510626 MYRIPQ8NFW9 859 aa9.57□□□□□ -0.88
HTT-208ENST00000510626 GBP1P32455 592 aa9.57□□□□□ -0.88
HTT-208ENST00000510626 STRN4Q9NRL3 753 aa9.57□□□□□ -0.88
HTT-208ENST00000510626 ATP11AP98196 1134 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms