RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 SCN11AQ9UI33 1791 aa5.91□□□□□ -1.46
PDLIM5-214ENST00000510099 EIF5BO60841 1220 aaKnown RBP5.91□□□□□ -1.46
PDLIM5-214ENST00000510099 UBTFL1P0CB47 393 aaPredicted RBP5.91□□□□□ -1.46
PDLIM5-214ENST00000510099 CSB-PGBD3P0DP91 1061 aa5.91□□□□□ -1.46
PDLIM5-214ENST00000510099 ATP8B2P98198 1209 aa5.91□□□□□ -1.46
PDLIM5-214ENST00000510099 CHRNA2Q15822 529 aa5.91□□□□□ -1.46
PDLIM5-214ENST00000510099 BEND3Q5T5X7 828 aa5.91□□□□□ -1.46
PDLIM5-214ENST00000510099 CABLES1Q8TDN4 633 aa5.91□□□□□ -1.46
PDLIM5-214ENST00000510099 OTUD7AQ8TE49 926 aaPredicted RBP5.91□□□□□ -1.46
PDLIM5-214ENST00000510099 DNAAF4Q8WXU2 420 aa5.91□□□□□ -1.46
PDLIM5-214ENST00000510099 RNF166Q96A37 237 aaPredicted RBP5.91□□□□□ -1.46
PDLIM5-214ENST00000510099 SRCIN1Q9C0H9 1055 aa5.91□□□□□ -1.46
PDLIM5-214ENST00000510099 USP44Q9H0E7 712 aa5.91□□□□□ -1.46
PDLIM5-214ENST00000510099 OSBPL3Q9H4L5 887 aa5.91□□□□□ -1.46
PDLIM5-214ENST00000510099 PHAXQ9H814 394 aaKnown RBP5.91□□□□□ -1.46
PDLIM5-214ENST00000510099 DBF4Q9UBU7 674 aaPredicted RBP5.91□□□□□ -1.46
PDLIM5-214ENST00000510099 LRRFIP2Q9Y608 721 aaKnown RBP5.91□□□□□ -1.46
PDLIM5-214ENST00000510099 WDR17Q8IZU2 1322 aa5.91□□□□□ -1.46
PDLIM5-214ENST00000510099 PNMA6EA0A0J9YXQ4 647 aa5.9□□□□□ -1.46
PDLIM5-214ENST00000510099 CYP27B1O15528 508 aa5.9□□□□□ -1.46
PDLIM5-214ENST00000510099 SMARCA5O60264 1052 aaPredicted RBP5.9□□□□□ -1.46
PDLIM5-214ENST00000510099 ALDH1L1O75891 902 aa5.9□□□□□ -1.46
PDLIM5-214ENST00000510099 HSP90AB1P08238 724 aaKnown RBP5.9□□□□□ -1.46
PDLIM5-214ENST00000510099 EIF2S2P20042 333 aaKnown RBP5.9□□□□□ -1.46
PDLIM5-214ENST00000510099 NBR1Q14596 966 aa5.9□□□□□ -1.46
PDLIM5-214ENST00000510099 PROSER3Q2NL68 480 aa5.9□□□□□ -1.46
PDLIM5-214ENST00000510099 RTL5Q5HYW3 569 aaPredicted RBP5.9□□□□□ -1.46
PDLIM5-214ENST00000510099 ZNF790Q6PG37 636 aa5.9□□□□□ -1.46
PDLIM5-214ENST00000510099 IFNL2Q8IZJ0 200 aa5.9□□□□□ -1.46
PDLIM5-214ENST00000510099 SSH3Q8TE77 659 aa5.9□□□□□ -1.46
PDLIM5-214ENST00000510099 DCAF5Q96JK2 942 aa5.9□□□□□ -1.46
PDLIM5-214ENST00000510099 TBC1D2Q9BYX2 928 aa5.9□□□□□ -1.46
PDLIM5-214ENST00000510099 PRDM11Q9NQV5 511 aa5.9□□□□□ -1.46
PDLIM5-214ENST00000510099 SLAIN2Q9P270 581 aa5.9□□□□□ -1.46
PDLIM5-214ENST00000510099 USP35Q9P2H5 1018 aa5.9□□□□□ -1.46
PDLIM5-214ENST00000510099 FBXO3Q9UK99 471 aa5.9□□□□□ -1.46
PDLIM5-214ENST00000510099 BOLA1Q9Y3E2 137 aa5.9□□□□□ -1.46
PDLIM5-214ENST00000510099 C5P01031 1676 aa5.9□□□□□ -1.47
PDLIM5-214ENST00000510099 AOX1Q06278 1338 aa5.9□□□□□ -1.47
PDLIM5-214ENST00000510099 TNS2Q63HR2 1409 aa5.9□□□□□ -1.47
PDLIM5-214ENST00000510099 PAPPAQ13219 1627 aa5.89□□□□□ -1.47
PDLIM5-214ENST00000510099 PI4KAP2A4QPH2 592 aa5.89□□□□□ -1.47
PDLIM5-214ENST00000510099 ANXA1P04083 346 aa5.89□□□□□ -1.47
PDLIM5-214ENST00000510099 HOXB3P14651 431 aaPredicted RBP5.89□□□□□ -1.47
PDLIM5-214ENST00000510099 MTX1Q13505 466 aa5.89□□□□□ -1.47
PDLIM5-214ENST00000510099 PDIA6Q15084 440 aa5.89□□□□□ -1.47
PDLIM5-214ENST00000510099 KSR2Q6VAB6 950 aa5.89□□□□□ -1.47
PDLIM5-214ENST00000510099 C16orf71Q8IYS4 520 aaPredicted RBP5.89□□□□□ -1.47
PDLIM5-214ENST00000510099 PI4KAP1Q8N8J0 262 aa5.89□□□□□ -1.47
PDLIM5-214ENST00000510099 SNX21Q969T3 373 aa5.89□□□□□ -1.47
PDLIM5-214ENST00000510099 LRRCC1Q9C099 1032 aa5.89□□□□□ -1.47
PDLIM5-214ENST00000510099 ANTXR1Q9H6X2 564 aa5.89□□□□□ -1.47
PDLIM5-214ENST00000510099 DDX21Q9NR30 783 aaKnown RBP eCLIP5.89□□□□□ -1.47
PDLIM5-214ENST00000510099 HYPKQ9NX55 129 aa5.89□□□□□ -1.47
PDLIM5-214ENST00000510099 EXOC6BQ9Y2D4 811 aa5.89□□□□□ -1.47
PDLIM5-214ENST00000510099 PCDH11XQ9BZA7 1347 aa5.89□□□□□ -1.47
PDLIM5-214ENST00000510099 PCDH11YQ9BZA8 1340 aa5.89□□□□□ -1.47
PDLIM5-214ENST00000510099 AHDC1Q5TGY3 1603 aaPredicted RBP5.88□□□□□ -1.47
PDLIM5-214ENST00000510099 LAMB4A4D0S4 1761 aa5.88□□□□□ -1.47
PDLIM5-214ENST00000510099 PRAMEF22A3QJZ6 481 aa5.88□□□□□ -1.47
PDLIM5-214ENST00000510099 RAB11FIP3O75154 756 aa5.88□□□□□ -1.47
PDLIM5-214ENST00000510099 HOXB1P14653 301 aaPredicted RBP5.88□□□□□ -1.47
PDLIM5-214ENST00000510099 SDSP20132 328 aa5.88□□□□□ -1.47
PDLIM5-214ENST00000510099 MX1P20591 662 aa5.88□□□□□ -1.47
PDLIM5-214ENST00000510099 PDE1AP54750 535 aa5.88□□□□□ -1.47
PDLIM5-214ENST00000510099 PDAP1Q13442 181 aaKnown RBP5.88□□□□□ -1.47
PDLIM5-214ENST00000510099 DOK7Q18PE1 504 aa5.88□□□□□ -1.47
PDLIM5-214ENST00000510099 LRP10Q7Z4F1 713 aa5.88□□□□□ -1.47
PDLIM5-214ENST00000510099 PPP1R42Q7Z4L9 355 aa5.88□□□□□ -1.47
PDLIM5-214ENST00000510099 ZNF496Q96IT1 587 aaPredicted RBP5.88□□□□□ -1.47
PDLIM5-214ENST00000510099 KIF2CQ99661 725 aa5.88□□□□□ -1.47
PDLIM5-214ENST00000510099 CARD10Q9BWT7 1032 aa5.88□□□□□ -1.47
PDLIM5-214ENST00000510099 STAP2Q9UGK3 403 aa5.88□□□□□ -1.47
PDLIM5-214ENST00000510099 MAP3K2Q9Y2U5 619 aa5.88□□□□□ -1.47
PDLIM5-214ENST00000510099 UTYO14607 1347 aa5.88□□□□□ -1.47
PDLIM5-214ENST00000510099 KCPQ6ZWJ8 1503 aa5.88□□□□□ -1.47
PDLIM5-214ENST00000510099 SHANK3Q9BYB0 1731 aa5.88□□□□□ -1.47
PDLIM5-214ENST00000510099 APBB1O00213 710 aa5.87□□□□□ -1.47
PDLIM5-214ENST00000510099 DDX58O95786 925 aaKnown RBP5.87□□□□□ -1.47
PDLIM5-214ENST00000510099 SNRPA1P09661 255 aaKnown RBP5.87□□□□□ -1.47
PDLIM5-214ENST00000510099 NBPF7P0C2Y1 421 aaPredicted RBP5.87□□□□□ -1.47
PDLIM5-214ENST00000510099 SLC39A6Q13433 755 aa5.87□□□□□ -1.47
PDLIM5-214ENST00000510099 NKX1-1Q15270 411 aaPredicted RBP5.87□□□□□ -1.47
PDLIM5-214ENST00000510099 NFKBIBQ15653 356 aa5.87□□□□□ -1.47
PDLIM5-214ENST00000510099 VARS2Q5ST30 1063 aaKnown RBP5.87□□□□□ -1.47
PDLIM5-214ENST00000510099 CASC1Q6TDU7 716 aa5.87□□□□□ -1.47
PDLIM5-214ENST00000510099 HSCBQ8IWL3 235 aa5.87□□□□□ -1.47
PDLIM5-214ENST00000510099 LINS1Q8NG48 757 aa5.87□□□□□ -1.47
PDLIM5-214ENST00000510099 FMNL2Q96PY5 1086 aa5.87□□□□□ -1.47
PDLIM5-214ENST00000510099 ERBB4Q15303 1308 aa5.87□□□□□ -1.47
PDLIM5-214ENST00000510099 USP42Q9H9J4 1324 aaKnown RBP5.87□□□□□ -1.47
PDLIM5-214ENST00000510099 COL15A1P39059 1388 aa5.87□□□□□ -1.47
PDLIM5-214ENST00000510099 DISP2A7MBM2 1401 aa5.87□□□□□ -1.47
PDLIM5-214ENST00000510099 COL22A1Q8NFW1 1626 aaPredicted RBP5.87□□□□□ -1.47
PDLIM5-214ENST00000510099 UBR2Q8IWV8 1755 aa5.87□□□□□ -1.47
PDLIM5-214ENST00000510099 TUBGCP6Q96RT7 1819 aa5.87□□□□□ -1.47
PDLIM5-214ENST00000510099 PLCH1Q4KWH8 1693 aa5.86□□□□□ -1.47
PDLIM5-214ENST00000510099 GRM8O00222 908 aa5.86□□□□□ -1.47
PDLIM5-214ENST00000510099 RIMBP2O15034 1052 aa5.86□□□□□ -1.47
PDLIM5-214ENST00000510099 SRGAP3O43295 1099 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms