RNA–Protein interactions for RNA: ENST00000509535.5

RACK1-222, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-222	ENST00000509535	ECE1	P42892	770 aa		11.78	□□□□□ -0.52
RACK1-222	ENST00000509535	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.78	□□□□□ -0.52
RACK1-222	ENST00000509535	SOGA3	Q5TF21	947 aa		11.78	□□□□□ -0.52
RACK1-222	ENST00000509535	PRPF40B	Q6NWY9	871 aa	Known RBP	11.78	□□□□□ -0.52
RACK1-222	ENST00000509535	PNMA8A	Q86V59	439 aa	Predicted RBP	11.78	□□□□□ -0.52
RACK1-222	ENST00000509535	CNKSR1	Q969H4	720 aa		11.78	□□□□□ -0.52
RACK1-222	ENST00000509535	GPR101	Q96P66	508 aa	Predicted RBP	11.78	□□□□□ -0.52
RACK1-222	ENST00000509535	RNF123	Q5XPI4	1314 aa		11.78	□□□□□ -0.52
RACK1-222	ENST00000509535	PRR5L	Q6MZQ0	368 aa		11.77	□□□□□ -0.53
RACK1-222	ENST00000509535	CYP4F22	Q6NT55	531 aa		11.77	□□□□□ -0.53
RACK1-222	ENST00000509535	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.77	□□□□□ -0.53
RACK1-222	ENST00000509535	BCOR	Q6W2J9	1755 aa		11.77	□□□□□ -0.53
RACK1-222	ENST00000509535	HSPA5	P11021	654 aa	Known RBP	11.76	□□□□□ -0.53
RACK1-222	ENST00000509535	TNNT2	P45379	298 aa	Predicted RBP	11.76	□□□□□ -0.53
RACK1-222	ENST00000509535	TBC1D9B	Q66K14	1250 aa		11.76	□□□□□ -0.53
RACK1-222	ENST00000509535	CANX	P27824	592 aa	Known RBP	11.75	□□□□□ -0.53
RACK1-222	ENST00000509535	FMR1	Q06787	632 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
RACK1-222	ENST00000509535	SLC39A6	Q13433	755 aa		11.75	□□□□□ -0.53
RACK1-222	ENST00000509535	DGKZ	Q13574	1117 aa		11.75	□□□□□ -0.53
RACK1-222	ENST00000509535	STYK1	Q6J9G0	422 aa		11.75	□□□□□ -0.53
RACK1-222	ENST00000509535	AEBP1	Q8IUX7	1158 aa		11.75	□□□□□ -0.53
RACK1-222	ENST00000509535	SLC52A2	Q9HAB3	445 aa		11.75	□□□□□ -0.53
RACK1-222	ENST00000509535	MRC1	P22897	1456 aa		11.75	□□□□□ -0.53
RACK1-222	ENST00000509535	AKAP11	Q9UKA4	1901 aa		11.74	□□□□□ -0.53
RACK1-222	ENST00000509535	AOC2	O75106	756 aa		11.74	□□□□□ -0.53
RACK1-222	ENST00000509535	SRGN	P10124	158 aa		11.74	□□□□□ -0.53
RACK1-222	ENST00000509535	CDCA8	Q53HL2	280 aa		11.74	□□□□□ -0.53
RACK1-222	ENST00000509535	CCDC93	Q567U6	631 aa		11.74	□□□□□ -0.53
RACK1-222	ENST00000509535	MASTL	Q96GX5	879 aa		11.74	□□□□□ -0.53
RACK1-222	ENST00000509535	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.74	□□□□□ -0.53
RACK1-222	ENST00000509535	NPHP1	O15259	732 aa		11.73	□□□□□ -0.53
RACK1-222	ENST00000509535	CA12	O43570	354 aa		11.73	□□□□□ -0.53
RACK1-222	ENST00000509535	MAP2K2	P36507	400 aa		11.73	□□□□□ -0.53
RACK1-222	ENST00000509535	EIF5	P55010	431 aa	Known RBP	11.73	□□□□□ -0.53
RACK1-222	ENST00000509535	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
RACK1-222	ENST00000509535	CNBD1	Q8NA66	436 aa		11.73	□□□□□ -0.53
RACK1-222	ENST00000509535	C7orf43	Q8WVR3	580 aa		11.73	□□□□□ -0.53
RACK1-222	ENST00000509535		A0A087WZG4	1122 aa		11.72	□□□□□ -0.53
RACK1-222	ENST00000509535	CST9	Q5W186	159 aa		11.72	□□□□□ -0.53
RACK1-222	ENST00000509535	GPC2	Q8N158	579 aa		11.72	□□□□□ -0.53
RACK1-222	ENST00000509535	TLL2	Q9Y6L7	1015 aa		11.72	□□□□□ -0.53
RACK1-222	ENST00000509535	FZD9	O00144	591 aa		11.71	□□□□□ -0.53
RACK1-222	ENST00000509535	ST5	P78524	1137 aa		11.71	□□□□□ -0.53
RACK1-222	ENST00000509535	PRPF38B	Q5VTL8	546 aa	Known RBP	11.71	□□□□□ -0.53
RACK1-222	ENST00000509535	VSIG10	Q8N0Z9	540 aa		11.71	□□□□□ -0.53
RACK1-222	ENST00000509535	LGR6	Q9HBX8	967 aa		11.71	□□□□□ -0.53
RACK1-222	ENST00000509535	TBC1D2B	Q9UPU7	963 aa		11.71	□□□□□ -0.53
RACK1-222	ENST00000509535	TRAF5	O00463	557 aa		11.7	□□□□□ -0.54
RACK1-222	ENST00000509535	STARD3NL	O95772	234 aa		11.7	□□□□□ -0.54
RACK1-222	ENST00000509535	IARS	P41252	1262 aa	Known RBP	11.7	□□□□□ -0.54
RACK1-222	ENST00000509535	SOX10	P56693	466 aa		11.7	□□□□□ -0.54
RACK1-222	ENST00000509535	AKAP4	Q5JQC9	854 aa		11.7	□□□□□ -0.54
RACK1-222	ENST00000509535	OLFM4	Q6UX06	510 aa		11.7	□□□□□ -0.54
RACK1-222	ENST00000509535	SETDB2	Q96T68	719 aa		11.7	□□□□□ -0.54
RACK1-222	ENST00000509535	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.7	□□□□□ -0.54
RACK1-222	ENST00000509535	SIPA1L3	O60292	1781 aa	Predicted RBP	11.69	□□□□□ -0.54
RACK1-222	ENST00000509535	POLR2A	P24928	1970 aa	Known RBP	11.69	□□□□□ -0.54
RACK1-222	ENST00000509535	LMOD1	P29536	600 aa	Predicted RBP	11.69	□□□□□ -0.54
RACK1-222	ENST00000509535	SULT6B1	Q6IMI4	303 aa		11.69	□□□□□ -0.54
RACK1-222	ENST00000509535	GJA3	Q9Y6H8	435 aa		11.69	□□□□□ -0.54
RACK1-222	ENST00000509535	COL4A5	P29400	1685 aa		11.68	□□□□□ -0.54
RACK1-222	ENST00000509535	RNMT	O43148	476 aa	Known RBP	11.68	□□□□□ -0.54
RACK1-222	ENST00000509535	BRPF1	P55201	1214 aa	Predicted RBP	11.68	□□□□□ -0.54
RACK1-222	ENST00000509535	RTKN2	Q8IZC4	609 aa		11.68	□□□□□ -0.54
RACK1-222	ENST00000509535	NPR1	P16066	1061 aa		11.67	□□□□□ -0.54
RACK1-222	ENST00000509535	EPS15	P42566	896 aa		11.67	□□□□□ -0.54
RACK1-222	ENST00000509535	CIAPIN1	Q6FI81	312 aa		11.67	□□□□□ -0.54
RACK1-222	ENST00000509535	SAPCD2	Q86UD0	394 aa		11.67	□□□□□ -0.54
RACK1-222	ENST00000509535	SYNE4	Q8N205	404 aa		11.67	□□□□□ -0.54
RACK1-222	ENST00000509535	JDP2	Q8WYK2	163 aa		11.67	□□□□□ -0.54
RACK1-222	ENST00000509535	CAMTA2	O94983	1202 aa		11.66	□□□□□ -0.54
RACK1-222	ENST00000509535	SCNN1D	P51172	638 aa		11.66	□□□□□ -0.54
RACK1-222	ENST00000509535	EIF6	P56537	245 aa	Known RBP	11.66	□□□□□ -0.54
RACK1-222	ENST00000509535	USP50	Q70EL3	339 aa	Predicted RBP	11.66	□□□□□ -0.54
RACK1-222	ENST00000509535	CELF2	O95319	508 aa	Known RBP	11.65	□□□□□ -0.54
RACK1-222	ENST00000509535	IL6ST	P40189	918 aa	Predicted RBP	11.65	□□□□□ -0.54
RACK1-222	ENST00000509535	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.65	□□□□□ -0.54
RACK1-222	ENST00000509535	TTC5	Q8N0Z6	440 aa		11.65	□□□□□ -0.54
RACK1-222	ENST00000509535	HHIPL1	Q96JK4	782 aa		11.65	□□□□□ -0.54
RACK1-222	ENST00000509535	SNED1	Q8TER0	1413 aa		11.64	□□□□□ -0.55
RACK1-222	ENST00000509535	NPM2	Q86SE8	214 aa	Known RBP	11.64	□□□□□ -0.55
RACK1-222	ENST00000509535	HEG1	Q9ULI3	1381 aa		11.64	□□□□□ -0.55
RACK1-222	ENST00000509535	KIF7	Q2M1P5	1343 aa		11.63	□□□□□ -0.55
RACK1-222	ENST00000509535	KLRG2	A4D1S0	409 aa	Predicted RBP	11.63	□□□□□ -0.55
RACK1-222	ENST00000509535	ZNF496	Q96IT1	587 aa	Predicted RBP	11.63	□□□□□ -0.55
RACK1-222	ENST00000509535	ZIC5	Q96T25	663 aa		11.63	□□□□□ -0.55
RACK1-222	ENST00000509535	PSMD1	Q99460	953 aa		11.63	□□□□□ -0.55
RACK1-222	ENST00000509535	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.63	□□□□□ -0.55
RACK1-222	ENST00000509535	A1BG	P04217	495 aa		11.62	□□□□□ -0.55
RACK1-222	ENST00000509535	ALDH1B1	P30837	517 aa		11.62	□□□□□ -0.55
RACK1-222	ENST00000509535	NOG	Q13253	232 aa		11.62	□□□□□ -0.55
RACK1-222	ENST00000509535	DZIP3	Q86Y13	1208 aa	Known RBP	11.62	□□□□□ -0.55
RACK1-222	ENST00000509535	NUP98	P52948	1817 aa		11.62	□□□□□ -0.55
RACK1-222	ENST00000509535	IL13	P35225	146 aa		11.61	□□□□□ -0.55
RACK1-222	ENST00000509535	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.61	□□□□□ -0.55
RACK1-222	ENST00000509535	ZNF408	Q9H9D4	720 aa		11.61	□□□□□ -0.55
RACK1-222	ENST00000509535	ZNF790	Q6PG37	636 aa		11.6	□□□□□ -0.55
RACK1-222	ENST00000509535	TPTE2	Q6XPS3	522 aa		11.6	□□□□□ -0.55
RACK1-222	ENST00000509535	LARGE2	Q8N3Y3	721 aa		11.6	□□□□□ -0.55
RACK1-222	ENST00000509535	ADARB2	Q9NS39	739 aa	Known RBP	11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms