RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 NBPF5PQ86XG9 351 aaPredicted RBP16.67■□□□□ 0.26
KDM3B-206ENST00000509468 CCDC24Q8N4L8 307 aa16.66■□□□□ 0.26
KDM3B-206ENST00000509468 RBM46Q8TBY0 533 aaKnown RBP16.66■□□□□ 0.26
KDM3B-206ENST00000509468 MASTLQ96GX5 879 aa16.66■□□□□ 0.26
KDM3B-206ENST00000509468 RRAGCQ9HB90 399 aa16.66■□□□□ 0.26
KDM3B-206ENST00000509468 C21orf2O43822 256 aa16.65■□□□□ 0.26
KDM3B-206ENST00000509468 SRGNP10124 158 aa16.65■□□□□ 0.26
KDM3B-206ENST00000509468 APLP1P51693 650 aa16.65■□□□□ 0.26
KDM3B-206ENST00000509468 EIF4A1P60842 406 aaKnown RBP16.65■□□□□ 0.26
KDM3B-206ENST00000509468 RASSF7Q02833 373 aa16.65■□□□□ 0.26
KDM3B-206ENST00000509468 DDX10Q13206 875 aaKnown RBP16.65■□□□□ 0.26
KDM3B-206ENST00000509468 SOGA3Q5TF21 947 aa16.65■□□□□ 0.26
KDM3B-206ENST00000509468 NIP7Q9Y221 180 aaKnown RBP eCLIP16.65■□□□□ 0.26
KDM3B-206ENST00000509468 RIPK4P57078 832 aa16.64■□□□□ 0.25
KDM3B-206ENST00000509468 KDM3BQ7LBC6 1761 aa16.64■□□□□ 0.25
KDM3B-206ENST00000509468 GLTPD2A6NH11 291 aa16.63■□□□□ 0.25
KDM3B-206ENST00000509468 ERVV-1B6SEH8 477 aa16.63■□□□□ 0.25
KDM3B-206ENST00000509468 FSTL1Q12841 308 aa16.63■□□□□ 0.25
KDM3B-206ENST00000509468 DPY19L2Q6NUT2 758 aa16.63■□□□□ 0.25
KDM3B-206ENST00000509468 BABAM1Q9NWV8 329 aa16.63■□□□□ 0.25
KDM3B-206ENST00000509468 RRP7AQ9Y3A4 280 aaKnown RBP16.63■□□□□ 0.25
KDM3B-206ENST00000509468 LAMB4A4D0S4 1761 aa16.62■□□□□ 0.25
KDM3B-206ENST00000509468 GTF2E1P29083 439 aaPredicted RBP16.62■□□□□ 0.25
KDM3B-206ENST00000509468 LMOD3Q0VAK6 560 aa16.62■□□□□ 0.25
KDM3B-206ENST00000509468 KIF6Q6ZMV9 814 aa16.62■□□□□ 0.25
KDM3B-206ENST00000509468 NGEFQ8N5V2 710 aa16.62■□□□□ 0.25
KDM3B-206ENST00000509468 THUMPD2Q9BTF0 503 aaKnown RBP16.62■□□□□ 0.25
KDM3B-206ENST00000509468 ZNF219Q9P2Y4 722 aaPredicted RBP16.62■□□□□ 0.25
KDM3B-206ENST00000509468 TNRC6CQ9HCJ0 1690 aaKnown RBP16.62■□□□□ 0.25
KDM3B-206ENST00000509468 FER1L6Q2WGJ9 1857 aa16.61■□□□□ 0.25
KDM3B-206ENST00000509468 KLRG2A4D1S0 409 aaPredicted RBP16.61■□□□□ 0.25
KDM3B-206ENST00000509468 NFKBIEO00221 500 aa16.61■□□□□ 0.25
KDM3B-206ENST00000509468 VEGFAP15692 232 aaPredicted RBP16.61■□□□□ 0.25
KDM3B-206ENST00000509468 NPR1P16066 1061 aa16.61■□□□□ 0.25
KDM3B-206ENST00000509468 PRELPP51888 382 aa16.61■□□□□ 0.25
KDM3B-206ENST00000509468 HLFQ16534 295 aa16.61■□□□□ 0.25
KDM3B-206ENST00000509468 NYXQ9GZU5 481 aa16.61■□□□□ 0.25
KDM3B-206ENST00000509468 SLX4Q8IY92 1834 aa16.61■□□□□ 0.25
KDM3B-206ENST00000509468 DICER1Q9UPY3 1922 aaKnown RBP16.6■□□□□ 0.25
KDM3B-206ENST00000509468 COL11A2P13942 1736 aaPredicted RBP16.6■□□□□ 0.25
KDM3B-206ENST00000509468 ALDH1B1P30837 517 aa16.6■□□□□ 0.25
KDM3B-206ENST00000509468 TMPOP42166 694 aaKnown RBP16.6■□□□□ 0.25
KDM3B-206ENST00000509468 ERFEQ4G0M1 354 aa16.6■□□□□ 0.25
KDM3B-206ENST00000509468 PRPF40BQ6NWY9 871 aaKnown RBP16.6■□□□□ 0.25
KDM3B-206ENST00000509468 TAOK3Q9H2K8 898 aa16.6■□□□□ 0.25
KDM3B-206ENST00000509468 TSPYL4Q9UJ04 414 aa16.6■□□□□ 0.25
KDM3B-206ENST00000509468 MYBBP1AQ9BQG0 1328 aaKnown RBP16.6■□□□□ 0.25
KDM3B-206ENST00000509468 LTBP3Q9NS15 1303 aa16.6■□□□□ 0.25
KDM3B-206ENST00000509468 NUP98P52948 1817 aa16.59■□□□□ 0.25
KDM3B-206ENST00000509468 CACNA1SQ13698 1873 aa16.59■□□□□ 0.25
KDM3B-206ENST00000509468 MYL6BP14649 208 aa16.59■□□□□ 0.25
KDM3B-206ENST00000509468 ERBB4Q15303 1308 aa16.59■□□□□ 0.25
KDM3B-206ENST00000509468 MAP3K15Q6ZN16 1313 aa16.59■□□□□ 0.25
KDM3B-206ENST00000509468 ARFGEF2Q9Y6D5 1785 aa16.59■□□□□ 0.25
KDM3B-206ENST00000509468 CEP350Q5VT06 3117 aa16.59■□□□□ 0.25
KDM3B-206ENST00000509468 FAM177BA6PVY3 158 aa16.58■□□□□ 0.24
KDM3B-206ENST00000509468 SMC1BQ8NDV3 1235 aa16.58■□□□□ 0.24
KDM3B-206ENST00000509468 WDR43Q15061 677 aaKnown RBP eCLIP16.57■□□□□ 0.24
KDM3B-206ENST00000509468 RUNDC1Q96C34 613 aa16.57■□□□□ 0.24
KDM3B-206ENST00000509468 TIAM2Q8IVF5 1701 aa16.56■□□□□ 0.24
KDM3B-206ENST00000509468 CCDC93Q567U6 631 aa16.56■□□□□ 0.24
KDM3B-206ENST00000509468 TTLL7Q6ZT98 887 aa16.56■□□□□ 0.24
KDM3B-206ENST00000509468 RTKN2Q8IZC4 609 aa16.56■□□□□ 0.24
KDM3B-206ENST00000509468 C7orf43Q8WVR3 580 aa16.56■□□□□ 0.24
KDM3B-206ENST00000509468 EIF2S2P20042 333 aaKnown RBP16.55■□□□□ 0.24
KDM3B-206ENST00000509468 DNAJC5GQ8N7S2 189 aa16.55■□□□□ 0.24
KDM3B-206ENST00000509468 NEUROD2Q15784 382 aa16.54■□□□□ 0.24
KDM3B-206ENST00000509468 GIGYF2Q6Y7W6 1299 aaKnown RBP16.54■□□□□ 0.24
KDM3B-206ENST00000509468 PPP1R42Q7Z4L9 355 aa16.54■□□□□ 0.24
KDM3B-206ENST00000509468 ZNF34Q8IZ26 560 aa16.54■□□□□ 0.24
KDM3B-206ENST00000509468 ZBTB3Q9H5J0 574 aa16.54■□□□□ 0.24
KDM3B-206ENST00000509468 CCDC146Q8IYE0 955 aa16.53■□□□□ 0.24
KDM3B-206ENST00000509468 GPTP24298 496 aa16.52■□□□□ 0.24
KDM3B-206ENST00000509468 FKBP4Q02790 459 aaKnown RBP eCLIP16.52■□□□□ 0.24
KDM3B-206ENST00000509468 CRY2Q49AN0 593 aa16.52■□□□□ 0.24
KDM3B-206ENST00000509468 GRIPAP1Q4V328 841 aa16.52■□□□□ 0.24
KDM3B-206ENST00000509468 PARP10Q53GL7 1025 aa16.52■□□□□ 0.24
KDM3B-206ENST00000509468 SUSD4Q5VX71 490 aa16.52■□□□□ 0.24
KDM3B-206ENST00000509468 CC2D2BQ6DHV5 1058 aa16.52■□□□□ 0.24
KDM3B-206ENST00000509468 NUTM1Q86Y26 1132 aa16.52■□□□□ 0.24
KDM3B-206ENST00000509468 RPGRQ92834 1020 aaKnown RBP16.52■□□□□ 0.24
KDM3B-206ENST00000509468 ADAMTS8Q9UP79 889 aa16.52■□□□□ 0.24
KDM3B-206ENST00000509468 WDR90Q96KV7 1748 aa16.52■□□□□ 0.24
KDM3B-206ENST00000509468 IBTKQ9P2D0 1353 aaPredicted RBP16.51■□□□□ 0.23
KDM3B-206ENST00000509468 POTECB2RU33 542 aa16.51■□□□□ 0.23
KDM3B-206ENST00000509468 CHL1O00533 1208 aa16.51■□□□□ 0.23
KDM3B-206ENST00000509468 HOXA10P31260 410 aaPredicted RBP16.51■□□□□ 0.23
KDM3B-206ENST00000509468 PDIA6Q15084 440 aa16.51■□□□□ 0.23
KDM3B-206ENST00000509468 HSP90AB3PQ58FF7 597 aa16.5■□□□□ 0.23
KDM3B-206ENST00000509468 RBM17Q96I25 401 aaKnown RBP16.5■□□□□ 0.23
KDM3B-206ENST00000509468 PRKRIP1Q9H875 184 aaPredicted RBP16.5■□□□□ 0.23
KDM3B-206ENST00000509468 TRIM35Q9UPQ4 493 aa16.5■□□□□ 0.23
KDM3B-206ENST00000509468 LAS1LQ9Y4W2 734 aaKnown RBP16.5■□□□□ 0.23
KDM3B-206ENST00000509468 DDNO94850 711 aaPredicted RBP16.49■□□□□ 0.23
KDM3B-206ENST00000509468 COPS6Q7L5N1 327 aa16.49■□□□□ 0.23
KDM3B-206ENST00000509468 LRP10Q7Z4F1 713 aa16.49■□□□□ 0.23
KDM3B-206ENST00000509468 SYNE4Q8N205 404 aa16.49■□□□□ 0.23
KDM3B-206ENST00000509468 NLRP3Q96P20 1036 aa16.49■□□□□ 0.23
KDM3B-206ENST00000509468 CRAMP1Q96RY5 1269 aa16.49■□□□□ 0.23
KDM3B-206ENST00000509468 UTP14AQ9BVJ6 771 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms