RNA–Protein interactions for RNA: ENST00000508502.5

SEC31A-227, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC31A, Length 3,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-227ENST00000508502 GDPD2Q9HCC8 539 aa11.79□□□□□ -0.52
SEC31A-227ENST00000508502 GPATCH3Q96I76 525 aa11.78□□□□□ -0.52
SEC31A-227ENST00000508502 TTC14Q96N46 770 aa11.78□□□□□ -0.52
SEC31A-227ENST00000508502 HYPKQ9NX55 129 aa11.78□□□□□ -0.52
SEC31A-227ENST00000508502 HDAC5Q9UQL6 1122 aa11.78□□□□□ -0.52
SEC31A-227ENST00000508502 PHRF1Q9P1Y6 1649 aaKnown RBP11.78□□□□□ -0.52
SEC31A-227ENST00000508502 ERC1Q8IUD2 1116 aa11.78□□□□□ -0.52
SEC31A-227ENST00000508502 RUFY2Q8WXA3 655 aa11.78□□□□□ -0.52
SEC31A-227ENST00000508502 AACSQ86V21 672 aa11.78□□□□□ -0.52
SEC31A-227ENST00000508502 CPA1P15085 419 aa11.77□□□□□ -0.52
SEC31A-227ENST00000508502 RUFY3Q7L099 469 aa11.77□□□□□ -0.52
SEC31A-227ENST00000508502 ZSCAN30Q86W11 494 aa11.77□□□□□ -0.52
SEC31A-227ENST00000508502 LIMCH1Q9UPQ0 1083 aa11.77□□□□□ -0.52
SEC31A-227ENST00000508502 HEG1Q9ULI3 1381 aa11.77□□□□□ -0.52
SEC31A-227ENST00000508502 GRM8O00222 908 aa11.77□□□□□ -0.53
SEC31A-227ENST00000508502 CASTP20810 708 aaKnown RBP11.77□□□□□ -0.53
SEC31A-227ENST00000508502 PTH1RQ03431 593 aa11.77□□□□□ -0.53
SEC31A-227ENST00000508502 LINS1Q8NG48 757 aa11.77□□□□□ -0.53
SEC31A-227ENST00000508502 SUCLG2Q96I99 432 aa11.77□□□□□ -0.53
SEC31A-227ENST00000508502 DDX58O95786 925 aaKnown RBP11.77□□□□□ -0.53
SEC31A-227ENST00000508502 OVOS2A0A0G2JMS6 1433 aa11.77□□□□□ -0.53
SEC31A-227ENST00000508502 GADD45BO75293 160 aaPredicted RBP11.76□□□□□ -0.53
SEC31A-227ENST00000508502 KRT28Q7Z3Y7 464 aa11.76□□□□□ -0.53
SEC31A-227ENST00000508502 USP48Q86UV5 1035 aa11.76□□□□□ -0.53
SEC31A-227ENST00000508502 DDX21Q9NR30 783 aaKnown RBP eCLIP11.76□□□□□ -0.53
SEC31A-227ENST00000508502 RPAP1Q9BWH6 1393 aaPredicted RBP11.76□□□□□ -0.53
SEC31A-227ENST00000508502 BICC1Q9H694 974 aaKnown RBP11.76□□□□□ -0.53
SEC31A-227ENST00000508502 SLIT3O75094 1523 aa11.76□□□□□ -0.53
SEC31A-227ENST00000508502 ZC3H6P61129 1189 aaKnown RBP11.76□□□□□ -0.53
SEC31A-227ENST00000508502 G3BP1Q13283 466 aaKnown RBP eCLIP11.76□□□□□ -0.532e-7■□□□□ 10.2
SEC31A-227ENST00000508502 PRPF40BQ6NWY9 871 aaKnown RBP11.76□□□□□ -0.53
SEC31A-227ENST00000508502 RNF214Q8ND24 703 aa11.76□□□□□ -0.53
SEC31A-227ENST00000508502 SYAP1Q96A49 352 aaPredicted RBP11.76□□□□□ -0.53
SEC31A-227ENST00000508502 MSNP26038 577 aaKnown RBP11.75□□□□□ -0.53
SEC31A-227ENST00000508502 SLC39A6Q13433 755 aa11.75□□□□□ -0.53
SEC31A-227ENST00000508502 EVI5LQ96CN4 794 aa11.75□□□□□ -0.53
SEC31A-227ENST00000508502 KAZALD1Q96I82 304 aa11.75□□□□□ -0.53
SEC31A-227ENST00000508502 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.75□□□□□ -0.53
SEC31A-227ENST00000508502 RIC3Q7Z5B4 369 aa11.75□□□□□ -0.53
SEC31A-227ENST00000508502 JAKMIP1Q96N16 626 aaKnown RBP11.75□□□□□ -0.53
SEC31A-227ENST00000508502 SMC3Q9UQE7 1217 aa11.75□□□□□ -0.53
SEC31A-227ENST00000508502 SASH1O94885 1247 aa11.75□□□□□ -0.53
SEC31A-227ENST00000508502 PDLIM2Q96JY6 352 aa11.75□□□□□ -0.53
SEC31A-227ENST00000508502 CCDC8Q9H0W5 538 aaPredicted RBP11.75□□□□□ -0.53
SEC31A-227ENST00000508502 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.75□□□□□ -0.53
SEC31A-227ENST00000508502 NPHP4O75161 1426 aaPredicted RBP11.74□□□□□ -0.53
SEC31A-227ENST00000508502 CRYBG1Q9Y4K1 1723 aa11.74□□□□□ -0.53
SEC31A-227ENST00000508502 ZSCAN22P10073 491 aaPredicted RBP11.74□□□□□ -0.53
SEC31A-227ENST00000508502 PDIA6Q15084 440 aa11.74□□□□□ -0.53
SEC31A-227ENST00000508502 ADCK5Q3MIX3 580 aa11.74□□□□□ -0.53
SEC31A-227ENST00000508502 SIL1Q9H173 461 aa11.74□□□□□ -0.53
SEC31A-227ENST00000508502 LARGE1O95461 756 aa11.74□□□□□ -0.53
SEC31A-227ENST00000508502 MYL6BP14649 208 aa11.74□□□□□ -0.53
SEC31A-227ENST00000508502 SYT1P21579 422 aa11.74□□□□□ -0.53
SEC31A-227ENST00000508502 TPRNQ4KMQ1 711 aa11.74□□□□□ -0.53
SEC31A-227ENST00000508502 EAF2Q96CJ1 260 aaPredicted RBP11.74□□□□□ -0.53
SEC31A-227ENST00000508502 PDRG1Q9NUG6 133 aa11.74□□□□□ -0.53
SEC31A-227ENST00000508502 STX6O43752 255 aa11.74□□□□□ -0.53
SEC31A-227ENST00000508502 DDX54Q8TDD1 881 aaKnown RBP11.74□□□□□ -0.53
SEC31A-227ENST00000508502 RAPGEF4Q8WZA2 1011 aa11.74□□□□□ -0.53
SEC31A-227ENST00000508502 TSPY26PQ9H489 355 aa11.74□□□□□ -0.53
SEC31A-227ENST00000508502 IGKV5-2P06315 115 aa11.73□□□□□ -0.53
SEC31A-227ENST00000508502 KCNJ4P48050 445 aa11.73□□□□□ -0.53
SEC31A-227ENST00000508502 ZNF790Q6PG37 636 aa11.73□□□□□ -0.53
SEC31A-227ENST00000508502 PROSER2Q86WR7 435 aaPredicted RBP11.73□□□□□ -0.53
SEC31A-227ENST00000508502 CCDC83Q8IWF9 413 aa11.73□□□□□ -0.53
SEC31A-227ENST00000508502 NLRP2Q9NX02 1062 aa11.73□□□□□ -0.53
SEC31A-227ENST00000508502 CNPY2Q9Y2B0 182 aa11.73□□□□□ -0.53
SEC31A-227ENST00000508502 UTYO14607 1347 aa11.73□□□□□ -0.53
SEC31A-227ENST00000508502 ERBB3P21860 1342 aa11.73□□□□□ -0.53
SEC31A-227ENST00000508502 DTNBO60941 627 aa11.73□□□□□ -0.53
SEC31A-227ENST00000508502 HS1BP3Q53T59 392 aa11.73□□□□□ -0.53
SEC31A-227ENST00000508502 FAM227BQ96M60 508 aa11.73□□□□□ -0.53
SEC31A-227ENST00000508502 CYP46A1Q9Y6A2 500 aa11.73□□□□□ -0.53
SEC31A-227ENST00000508502 ZNF142P52746 1687 aaPredicted RBP11.73□□□□□ -0.53
SEC31A-227ENST00000508502 CCDC171Q6TFL3 1326 aa11.73□□□□□ -0.53
SEC31A-227ENST00000508502 TLR7Q9NYK1 1049 aaKnown RBP11.73□□□□□ -0.53
SEC31A-227ENST00000508502 NEXNQ0ZGT2 675 aa11.72□□□□□ -0.53
SEC31A-227ENST00000508502 VPS53Q5VIR6 699 aa11.72□□□□□ -0.53
SEC31A-227ENST00000508502 LARP1Q6PKG0 1096 aaKnown RBP11.72□□□□□ -0.53
SEC31A-227ENST00000508502 KLHDC4Q8TBB5 520 aa11.72□□□□□ -0.53
SEC31A-227ENST00000508502 PHF14O94880 888 aa11.72□□□□□ -0.53
SEC31A-227ENST00000508502 ZKSCAN1P17029 563 aaPredicted RBP11.72□□□□□ -0.53
SEC31A-227ENST00000508502 NMIQ13287 307 aaPredicted RBP11.72□□□□□ -0.53
SEC31A-227ENST00000508502 NECTIN1Q15223 517 aa11.72□□□□□ -0.53
SEC31A-227ENST00000508502 NFATC2IPQ8NCF5 419 aa11.72□□□□□ -0.53
SEC31A-227ENST00000508502 BOLA2Q9H3K6 86 aa11.72□□□□□ -0.53
SEC31A-227ENST00000508502 ZSWIM6Q9HCJ5 1215 aa11.72□□□□□ -0.53
SEC31A-227ENST00000508502 RBM8AQ9Y5S9 174 aaKnown RBP11.72□□□□□ -0.53
SEC31A-227ENST00000508502 XAGE3Q8WTP9 111 aa11.72□□□□□ -0.53
SEC31A-227ENST00000508502 TM6SF1Q9BZW5 370 aa11.72□□□□□ -0.53
SEC31A-227ENST00000508502 SLC52A2Q9HAB3 445 aa11.72□□□□□ -0.53
SEC31A-227ENST00000508502 F13A1P00488 732 aa11.71□□□□□ -0.53
SEC31A-227ENST00000508502 GJB2P29033 226 aa11.71□□□□□ -0.53
SEC31A-227ENST00000508502 COPS6Q7L5N1 327 aa11.71□□□□□ -0.53
SEC31A-227ENST00000508502 TMEM87AQ8NBN3 555 aa11.71□□□□□ -0.53
SEC31A-227ENST00000508502 NPHP3Q7Z494 1330 aa11.71□□□□□ -0.53
SEC31A-227ENST00000508502 NEURL1BA8MQ27 555 aa11.71□□□□□ -0.53
SEC31A-227ENST00000508502 HIP1O00291 1037 aa11.71□□□□□ -0.53
SEC31A-227ENST00000508502 CREB3L3Q68CJ9 461 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms