RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 TIAM2Q8IVF5 1701 aa21.45■■□□□ 1.02
LMNA-222ENST00000508500 MYBBP1AQ9BQG0 1328 aaKnown RBP21.45■■□□□ 1.02
LMNA-222ENST00000508500 MAPK8IP3Q9UPT6 1336 aa21.45■■□□□ 1.02
LMNA-222ENST00000508500 NPM2Q86SE8 214 aaKnown RBP21.44■■□□□ 1.02
LMNA-222ENST00000508500 TTLL6Q8N841 843 aa21.44■■□□□ 1.02
LMNA-222ENST00000508500 RBM46Q8TBY0 533 aaKnown RBP21.44■■□□□ 1.02
LMNA-222ENST00000508500 PNISRQ8TF01 805 aaKnown RBP21.44■■□□□ 1.02
LMNA-222ENST00000508500 PNNQ9H307 717 aaKnown RBP21.44■■□□□ 1.02
LMNA-222ENST00000508500 HLFQ16534 295 aa21.43■■□□□ 1.02
LMNA-222ENST00000508500 CLEC4GQ6UXB4 293 aa21.43■■□□□ 1.02
LMNA-222ENST00000508500 RIPK4P57078 832 aa21.42■■□□□ 1.02
LMNA-222ENST00000508500 RNF181Q9P0P0 153 aa21.42■■□□□ 1.02
LMNA-222ENST00000508500 PDE6BP35913 854 aa21.41■■□□□ 1.02
LMNA-222ENST00000508500 TMPOP42166 694 aaKnown RBP21.41■■□□□ 1.02
LMNA-222ENST00000508500 CNBD1Q8NA66 436 aa21.41■■□□□ 1.02
LMNA-222ENST00000508500 ZC3H4Q9UPT8 1303 aaKnown RBP21.39■■□□□ 1.01
LMNA-222ENST00000508500 NFKBIEO00221 500 aa21.39■■□□□ 1.01
LMNA-222ENST00000508500 CCDC146Q8IYE0 955 aa21.39■■□□□ 1.01
LMNA-222ENST00000508500 ZNF622Q969S3 477 aaKnown RBP eCLIP21.39■■□□□ 1.016e-15■□□□□ 8.5
LMNA-222ENST00000508500 RRP7AQ9Y3A4 280 aaKnown RBP21.39■■□□□ 1.01
LMNA-222ENST00000508500 RGL2O15211 777 aa21.38■■□□□ 1.01
LMNA-222ENST00000508500 NGEFQ8N5V2 710 aa21.38■■□□□ 1.01
LMNA-222ENST00000508500 KDM2BQ8NHM5 1336 aa21.37■■□□□ 1.01
LMNA-222ENST00000508500 SRGNP10124 158 aa21.37■■□□□ 1.01
LMNA-222ENST00000508500 FSTL1Q12841 308 aa21.37■■□□□ 1.01
LMNA-222ENST00000508500 TTLL7Q6ZT98 887 aa21.37■■□□□ 1.01
LMNA-222ENST00000508500 PDZRN3Q9UPQ7 1066 aa21.37■■□□□ 1.01
LMNA-222ENST00000508500 NIP7Q9Y221 180 aaKnown RBP eCLIP21.37■■□□□ 1.01
LMNA-222ENST00000508500 ZNF652Q9Y2D9 606 aa21.37■■□□□ 1.01
LMNA-222ENST00000508500 C21orf2O43822 256 aa21.36■■□□□ 1.01
LMNA-222ENST00000508500 ST5P78524 1137 aa21.36■■□□□ 1.01
LMNA-222ENST00000508500 NBPF5PQ86XG9 351 aaPredicted RBP21.36■■□□□ 1.01
LMNA-222ENST00000508500 PRKRIP1Q9H875 184 aaPredicted RBP21.36■■□□□ 1.01
LMNA-222ENST00000508500 ZNF219Q9P2Y4 722 aaPredicted RBP21.36■■□□□ 1.01
LMNA-222ENST00000508500 TSPYL4Q9UJ04 414 aa21.36■■□□□ 1.01
LMNA-222ENST00000508500 MYL6BP14649 208 aa21.35■■□□□ 1.01
LMNA-222ENST00000508500 LMNB1P20700 586 aa21.35■■□□□ 1.01
LMNA-222ENST00000508500 LRP10Q7Z4F1 713 aa21.35■■□□□ 1.01
LMNA-222ENST00000508500 ADAMTS8Q9UP79 889 aa21.35■■□□□ 1.01
LMNA-222ENST00000508500 TRIM35Q9UPQ4 493 aa21.35■■□□□ 1.01
LMNA-222ENST00000508500 KLRG2A4D1S0 409 aaPredicted RBP21.34■■□□□ 1.01
LMNA-222ENST00000508500 FAM177BA6PVY3 158 aa21.34■■□□□ 1.01
LMNA-222ENST00000508500 PDIA6Q15084 440 aa21.34■■□□□ 1.01
LMNA-222ENST00000508500 STYK1Q6J9G0 422 aa21.34■■□□□ 1.01
LMNA-222ENST00000508500 RRAGCQ9HB90 399 aa21.34■■□□□ 1.01
LMNA-222ENST00000508500 MAP3K15Q6ZN16 1313 aa21.33■■□□□ 1.01
LMNA-222ENST00000508500 NPHP1O15259 732 aa21.33■■□□□ 1.01
LMNA-222ENST00000508500 NEUROD2Q15784 382 aa21.33■■□□□ 1.01
LMNA-222ENST00000508500 JMYQ8N9B5 988 aa21.33■■□□□ 1.01
LMNA-222ENST00000508500 RUNDC1Q96C34 613 aa21.33■■□□□ 1.01
LMNA-222ENST00000508500 MASTLQ96GX5 879 aa21.33■■□□□ 1.01
LMNA-222ENST00000508500 ANKRD36CQ5JPF3 1778 aa21.33■■□□□ 1
LMNA-222ENST00000508500 ERVV-1B6SEH8 477 aa21.32■■□□□ 1
LMNA-222ENST00000508500 TPTE2Q6XPS3 522 aa21.32■■□□□ 1
LMNA-222ENST00000508500 BABAM1Q9NWV8 329 aa21.32■■□□□ 1
LMNA-222ENST00000508500 HTRA3P83110 453 aa21.31■■□□□ 1
LMNA-222ENST00000508500 PRPF40BQ6NWY9 871 aaKnown RBP21.31■■□□□ 1
LMNA-222ENST00000508500 C7orf43Q8WVR3 580 aa21.31■■□□□ 1
LMNA-222ENST00000508500 CNKSR1Q969H4 720 aa21.31■■□□□ 1
LMNA-222ENST00000508500 UBN2Q6ZU65 1347 aa21.3■■□□□ 1
LMNA-222ENST00000508500 PCNTO95613 3336 aa21.3■■□□□ 1
LMNA-222ENST00000508500 GLTPD2A6NH11 291 aa21.3■■□□□ 1
LMNA-222ENST00000508500 LMOD3Q0VAK6 560 aa21.3■■□□□ 1
LMNA-222ENST00000508500 KRT24Q2M2I5 525 aa21.3■■□□□ 1
LMNA-222ENST00000508500 PROSER3Q2NL68 480 aa21.3■■□□□ 1
LMNA-222ENST00000508500 KLRG1Q96E93 195 aa21.3■■□□□ 1
LMNA-222ENST00000508500 ZBTB3Q9H5J0 574 aa21.3■■□□□ 1
LMNA-222ENST00000508500 ABCC12Q96J65 1359 aa21.3■■□□□ 1
LMNA-222ENST00000508500 ERBB4Q15303 1308 aa21.29■■□□□ 1
LMNA-222ENST00000508500 POTECB2RU33 542 aa21.29■■□□□ 1
LMNA-222ENST00000508500 CHL1O00533 1208 aa21.29■■□□□ 1
LMNA-222ENST00000508500 ANXA1P04083 346 aa21.29■■□□□ 1
LMNA-222ENST00000508500 EIF2S2P20042 333 aaKnown RBP21.29■■□□□ 1
LMNA-222ENST00000508500 WDR43Q15061 677 aaKnown RBP eCLIP21.29■■□□□ 1
LMNA-222ENST00000508500 NPR1P16066 1061 aa21.28■■□□□ 1
LMNA-222ENST00000508500 GPTP24298 496 aa21.28■■□□□ 1
LMNA-222ENST00000508500 NUTM1Q86Y26 1132 aa21.28■■□□□ 1
LMNA-222ENST00000508500 C16orf71Q8IYS4 520 aaPredicted RBP21.28■■□□□ 1
LMNA-222ENST00000508500 ZNF34Q8IZ26 560 aa21.28■■□□□ 1
LMNA-222ENST00000508500 LAMB2P55268 1798 aa21.28■■□□□ 1
LMNA-222ENST00000508500 LTBP3Q9NS15 1303 aa21.28■■□□□ 1
LMNA-222ENST00000508500 OLFM4Q6UX06 510 aa21.27■■□□□ 1
LMNA-222ENST00000508500 KIF6Q6ZMV9 814 aa21.27■■□□□ 1
LMNA-222ENST00000508500 ERFEQ4G0M1 354 aa21.26■□□□□ 0.99
LMNA-222ENST00000508500 SUSD4Q5VX71 490 aa21.26■□□□□ 0.99
LMNA-222ENST00000508500 GIGYF2Q6Y7W6 1299 aaKnown RBP21.26■□□□□ 0.99
LMNA-222ENST00000508500 SMC1BQ8NDV3 1235 aa21.26■□□□□ 0.99
LMNA-222ENST00000508500 NECTIN2Q92692 538 aa21.25■□□□□ 0.99
LMNA-222ENST00000508500 TAOK3Q9H2K8 898 aa21.25■□□□□ 0.99
LMNA-222ENST00000508500 VEGFAP15692 232 aaPredicted RBP21.24■□□□□ 0.99
LMNA-222ENST00000508500 CRY2Q49AN0 593 aa21.24■□□□□ 0.99
LMNA-222ENST00000508500 IBTKQ9P2D0 1353 aaPredicted RBP21.23■□□□□ 0.99
LMNA-222ENST00000508500 RIC1Q4ADV7 1423 aa21.23■□□□□ 0.99
LMNA-222ENST00000508500 SNED1Q8TER0 1413 aa21.23■□□□□ 0.99
LMNA-222ENST00000508500 NTSR2O95665 410 aa21.23■□□□□ 0.99
LMNA-222ENST00000508500 GTF2E1P29083 439 aaPredicted RBP21.23■□□□□ 0.99
LMNA-222ENST00000508500 CCDC184Q52MB2 194 aa21.23■□□□□ 0.99
LMNA-222ENST00000508500 NYXQ9GZU5 481 aa21.23■□□□□ 0.99
LMNA-222ENST00000508500 LAS1LQ9Y4W2 734 aaKnown RBP21.23■□□□□ 0.99
LMNA-222ENST00000508500 TAF1P21675 1872 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms