RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 C16orf46Q6P387 395 aa9.53□□□□□ -0.88
GYPA-205ENST00000508337 HSH2DQ96JZ2 352 aa9.53□□□□□ -0.88
GYPA-205ENST00000508337 NFX1Q12986 1120 aaKnown RBP9.52□□□□□ -0.89
GYPA-205ENST00000508337 COL26A1Q96A83 441 aa9.52□□□□□ -0.89
GYPA-205ENST00000508337 CEP63Q96MT8 703 aa9.52□□□□□ -0.89
GYPA-205ENST00000508337 PCDHGC4Q9Y5F7 938 aa9.52□□□□□ -0.89
GYPA-205ENST00000508337 VSIG8P0DPA2 414 aa9.51□□□□□ -0.89
GYPA-205ENST00000508337 PDIA4P13667 645 aaKnown RBP9.51□□□□□ -0.89
GYPA-205ENST00000508337 POTEAQ6S8J7 498 aa9.51□□□□□ -0.89
GYPA-205ENST00000508337 TREML4Q6UXN2 200 aa9.51□□□□□ -0.89
GYPA-205ENST00000508337 ABHD17AQ96GS6 310 aa9.51□□□□□ -0.89
GYPA-205ENST00000508337 SUSD3Q96L08 255 aa9.51□□□□□ -0.89
GYPA-205ENST00000508337 ZCCHC2Q9C0B9 1178 aaKnown RBP9.51□□□□□ -0.89
GYPA-205ENST00000508337 QTRT2Q9H974 415 aaKnown RBP9.51□□□□□ -0.89
GYPA-205ENST00000508337 KLK14Q9P0G3 267 aa9.51□□□□□ -0.89
GYPA-205ENST00000508337 ATXN7L1Q9ULK2 861 aaPredicted RBP9.51□□□□□ -0.89
GYPA-205ENST00000508337 ABL1P00519 1130 aa9.5□□□□□ -0.89
GYPA-205ENST00000508337 EPB42P16452 691 aa9.5□□□□□ -0.89
GYPA-205ENST00000508337 SSFA2P28290 1259 aa9.5□□□□□ -0.89
GYPA-205ENST00000508337 ERBB4Q15303 1308 aa9.5□□□□□ -0.89
GYPA-205ENST00000508337 TGFBR3LH3BV60 316 aa9.49□□□□□ -0.89
GYPA-205ENST00000508337 MX2P20592 715 aa9.49□□□□□ -0.89
GYPA-205ENST00000508337 C11orf91Q3C1V1 193 aa9.49□□□□□ -0.89
GYPA-205ENST00000508337 MYO19Q96H55 970 aa9.49□□□□□ -0.89
GYPA-205ENST00000508337 COL25A1Q9BXS0 654 aaPredicted RBP9.49□□□□□ -0.89
GYPA-205ENST00000508337 SLAIN2Q9P270 581 aa9.49□□□□□ -0.89
GYPA-205ENST00000508337 FAM157BP0CG42 384 aa9.48□□□□□ -0.89
GYPA-205ENST00000508337 FGFR3P22607 806 aa9.48□□□□□ -0.89
GYPA-205ENST00000508337 ABTB2Q8N961 1025 aa9.48□□□□□ -0.89
GYPA-205ENST00000508337 CFHR5Q9BXR6 569 aa9.48□□□□□ -0.89
GYPA-205ENST00000508337 BMP4P12644 408 aa9.47□□□□□ -0.89
GYPA-205ENST00000508337 BRD2P25440 801 aaKnown RBP9.47□□□□□ -0.89
GYPA-205ENST00000508337 GMPRP36959 345 aa9.47□□□□□ -0.89
GYPA-205ENST00000508337 SAMD5Q5TGI4 173 aa9.47□□□□□ -0.89
GYPA-205ENST00000508337 CCER1Q8TC90 406 aaPredicted RBP9.47□□□□□ -0.89
GYPA-205ENST00000508337 IFT43Q96FT9 208 aa9.47□□□□□ -0.89
GYPA-205ENST00000508337 CNTNAP3BQ96NU0 1288 aa9.47□□□□□ -0.89
GYPA-205ENST00000508337 CNTNAP3Q9BZ76 1288 aa9.47□□□□□ -0.89
GYPA-205ENST00000508337 BRD7Q9NPI1 651 aa9.47□□□□□ -0.89
GYPA-205ENST00000508337 MBIPQ9NS73 344 aa9.47□□□□□ -0.89
GYPA-205ENST00000508337 SEPT3Q9UH03 358 aa9.47□□□□□ -0.89
GYPA-205ENST00000508337 ARID4AP29374 1257 aaPredicted RBP9.46□□□□□ -0.9
GYPA-205ENST00000508337 NEUROD1Q13562 356 aa9.46□□□□□ -0.9
GYPA-205ENST00000508337 COX20Q5RI15 118 aa9.46□□□□□ -0.9
GYPA-205ENST00000508337 BTLAQ7Z6A9 289 aa9.46□□□□□ -0.9
GYPA-205ENST00000508337 ZNF280CQ8ND82 737 aa9.46□□□□□ -0.9
GYPA-205ENST00000508337 BNIP3LO60238 219 aa9.45□□□□□ -0.9
GYPA-205ENST00000508337 BRD1O95696 1058 aa9.45□□□□□ -0.9
GYPA-205ENST00000508337 MAPTP10636 758 aaKnown RBP9.45□□□□□ -0.9
GYPA-205ENST00000508337 CD33P20138 364 aa9.45□□□□□ -0.9
GYPA-205ENST00000508337 IDH3AP50213 366 aa9.45□□□□□ -0.9
GYPA-205ENST00000508337 AAMPQ13685 434 aa9.45□□□□□ -0.9
GYPA-205ENST00000508337 IER5Q5VY09 327 aa9.45□□□□□ -0.9
GYPA-205ENST00000508337 GTF3C2Q8WUA4 911 aaPredicted RBP9.45□□□□□ -0.9
GYPA-205ENST00000508337 FAM13BQ9NYF5 915 aa9.45□□□□□ -0.9
GYPA-205ENST00000508337 MARK1Q9P0L2 795 aa9.45□□□□□ -0.9
GYPA-205ENST00000508337 PRR12Q9ULL5 1215 aa9.45□□□□□ -0.9
GYPA-205ENST00000508337 PATL2C9JE40 543 aaKnown RBP9.44□□□□□ -0.9
GYPA-205ENST00000508337 ARSDP51689 593 aa9.44□□□□□ -0.9
GYPA-205ENST00000508337 TYRO3Q06418 890 aa9.44□□□□□ -0.9
GYPA-205ENST00000508337 CAPN12Q6ZSI9 719 aa9.44□□□□□ -0.9
GYPA-205ENST00000508337 HOMEZQ8IX15 550 aa9.44□□□□□ -0.9
GYPA-205ENST00000508337 GPR161Q8N6U8 529 aaKnown RBP9.44□□□□□ -0.9
GYPA-205ENST00000508337 HELQQ8TDG4 1101 aa9.44□□□□□ -0.9
GYPA-205ENST00000508337 SAP130Q9H0E3 1048 aa9.44□□□□□ -0.9
GYPA-205ENST00000508337 STIM2Q9P246 746 aa9.44□□□□□ -0.9
GYPA-205ENST00000508337 SCNN1AP37088 669 aa9.43□□□□□ -0.9
GYPA-205ENST00000508337 MAP2K3P46734 347 aa9.43□□□□□ -0.9
GYPA-205ENST00000508337 ZNF211Q13398 564 aaPredicted RBP9.43□□□□□ -0.9
GYPA-205ENST00000508337 LAMC2Q13753 1193 aa9.43□□□□□ -0.9
GYPA-205ENST00000508337 TREML1Q86YW5 311 aa9.43□□□□□ -0.9
GYPA-205ENST00000508337 TTC16Q8NEE8 873 aa9.43□□□□□ -0.9
GYPA-205ENST00000508337 PNMA5Q96PV4 448 aa9.43□□□□□ -0.9
GYPA-205ENST00000508337 LRFN2Q9ULH4 789 aa9.43□□□□□ -0.9
GYPA-205ENST00000508337 KCNH4Q9UQ05 1017 aa9.43□□□□□ -0.9
GYPA-205ENST00000508337 MICAL2O94851 1124 aa9.42□□□□□ -0.9
GYPA-205ENST00000508337 THBS1P07996 1170 aa9.42□□□□□ -0.9
GYPA-205ENST00000508337 TNP2Q05952 138 aa9.42□□□□□ -0.9
GYPA-205ENST00000508337 GLYCTKQ8IVS8 523 aa9.42□□□□□ -0.9
GYPA-205ENST00000508337 H3BRB1 525 aa9.41□□□□□ -0.9
GYPA-205ENST00000508337 PCSK2P16519 638 aa9.41□□□□□ -0.9
GYPA-205ENST00000508337 AEBP1Q8IUX7 1158 aa9.41□□□□□ -0.9
GYPA-205ENST00000508337 TRAIPQ9BWF2 469 aa9.41□□□□□ -0.9
GYPA-205ENST00000508337 TUT1Q9H6E5 874 aaKnown RBP9.41□□□□□ -0.9
GYPA-205ENST00000508337 ANO2Q9NQ90 1003 aa9.41□□□□□ -0.9
GYPA-205ENST00000508337 IGF1RP08069 1367 aa9.4□□□□□ -0.9
GYPA-205ENST00000508337 SF3B2Q13435 895 aaKnown RBP9.4□□□□□ -0.9
GYPA-205ENST00000508337 GAS6Q14393 721 aa9.4□□□□□ -0.9
GYPA-205ENST00000508337 RNFT1Q5M7Z0 435 aa9.4□□□□□ -0.9
GYPA-205ENST00000508337 RGL4Q8IZJ4 473 aa9.4□□□□□ -0.9
GYPA-205ENST00000508337 FAM13AO94988 1023 aa9.39□□□□□ -0.91
GYPA-205ENST00000508337 ADAMTS2O95450 1211 aa9.39□□□□□ -0.91
GYPA-205ENST00000508337 ZAP70P43403 619 aa9.39□□□□□ -0.91
GYPA-205ENST00000508337 SERPINB4P48594 390 aa9.39□□□□□ -0.91
GYPA-205ENST00000508337 MAP3K10Q02779 954 aa9.39□□□□□ -0.91
GYPA-205ENST00000508337 SRSF11Q05519 484 aaKnown RBP9.39□□□□□ -0.91
GYPA-205ENST00000508337 KCNA1Q09470 495 aa9.39□□□□□ -0.91
GYPA-205ENST00000508337 UBAP2LQ14157 1087 aaKnown RBP9.39□□□□□ -0.91
GYPA-205ENST00000508337 ALKBH2Q6NS38 261 aa9.39□□□□□ -0.91
GYPA-205ENST00000508337 KLRG1Q96E93 195 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms