RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 CACNA1FO60840 1977 aa19.33■□□□□ 0.68
RNF4-210ENST00000508235 NUP98P52948 1817 aa19.32■□□□□ 0.68
RNF4-210ENST00000508235 PROSER3Q2NL68 480 aa19.32■□□□□ 0.68
RNF4-210ENST00000508235 LRP10Q7Z4F1 713 aa19.32■□□□□ 0.68
RNF4-210ENST00000508235 SETDB2Q96T68 719 aa19.32■□□□□ 0.68
RNF4-210ENST00000508235 SYT17Q9BSW7 474 aa19.32■□□□□ 0.68
RNF4-210ENST00000508235 STK31Q9BXU1 1019 aa19.32■□□□□ 0.68
RNF4-210ENST00000508235 SPINK5Q9NQ38 1064 aaPredicted RBP19.32■□□□□ 0.68
RNF4-210ENST00000508235 CARMIL3Q8ND23 1372 aa19.32■□□□□ 0.68
RNF4-210ENST00000508235 KIF13BQ9NQT8 1826 aa19.31■□□□□ 0.68
RNF4-210ENST00000508235 POLRMTO00411 1230 aaKnown RBP19.31■□□□□ 0.68
RNF4-210ENST00000508235 EXOSC9Q06265 439 aaKnown RBP19.31■□□□□ 0.68
RNF4-210ENST00000508235 TBC1D9BQ66K14 1250 aa19.31■□□□□ 0.68
RNF4-210ENST00000508235 COPS6Q7L5N1 327 aa19.31■□□□□ 0.68
RNF4-210ENST00000508235 AFDNP55196 1824 aaKnown RBP19.3■□□□□ 0.68
RNF4-210ENST00000508235 ANXA1P04083 346 aa19.3■□□□□ 0.68
RNF4-210ENST00000508235 HNRNPUQ00839 825 aaKnown RBP eCLIP19.3■□□□□ 0.68
RNF4-210ENST00000508235 DDR1Q08345 913 aa19.3■□□□□ 0.68
RNF4-210ENST00000508235 SLFN5Q08AF3 891 aa19.3■□□□□ 0.68
RNF4-210ENST00000508235 BICDL1Q6ZP65 573 aa19.3■□□□□ 0.68
RNF4-210ENST00000508235 TTLL7Q6ZT98 887 aa19.3■□□□□ 0.68
RNF4-210ENST00000508235 XAGE3Q8WTP9 111 aa19.3■□□□□ 0.68
RNF4-210ENST00000508235 NRXN2Q9P2S2 1712 aa19.3■□□□□ 0.68
RNF4-210ENST00000508235 AIMP1Q12904 312 aaKnown RBP19.29■□□□□ 0.68
RNF4-210ENST00000508235 VAMP4O75379 141 aa19.28■□□□□ 0.68
RNF4-210ENST00000508235 SERPINB2P05120 415 aa19.28■□□□□ 0.68
RNF4-210ENST00000508235 GIGYF2Q6Y7W6 1299 aaKnown RBP19.28■□□□□ 0.68
RNF4-210ENST00000508235 ZBTB3Q9H5J0 574 aa19.28■□□□□ 0.68
RNF4-210ENST00000508235 C10orf71Q711Q0 1435 aa19.27■□□□□ 0.68
RNF4-210ENST00000508235 ATP10DQ9P241 1426 aa19.27■□□□□ 0.68
RNF4-210ENST00000508235 HLFQ16534 295 aa19.27■□□□□ 0.68
RNF4-210ENST00000508235 HSP90AB3PQ58FF7 597 aa19.27■□□□□ 0.68
RNF4-210ENST00000508235 PLBD2Q8NHP8 589 aa19.27■□□□□ 0.68
RNF4-210ENST00000508235 NIP7Q9Y221 180 aaKnown RBP eCLIP19.27■□□□□ 0.68
RNF4-210ENST00000508235 DCAF8L1A6NGE4 600 aa19.26■□□□□ 0.67
RNF4-210ENST00000508235 NPHP1O15259 732 aa19.26■□□□□ 0.67
RNF4-210ENST00000508235 ANKRD13DQ6ZTN6 518 aa19.26■□□□□ 0.67
RNF4-210ENST00000508235 ANKRD36CQ5JPF3 1778 aa19.26■□□□□ 0.67
RNF4-210ENST00000508235 DDX58O95786 925 aaKnown RBP19.25■□□□□ 0.67
RNF4-210ENST00000508235 TGFB2P61812 414 aa19.25■□□□□ 0.67
RNF4-210ENST00000508235 TPTE2Q6XPS3 522 aa19.24■□□□□ 0.67
RNF4-210ENST00000508235 NBPF5PQ86XG9 351 aaPredicted RBP19.24■□□□□ 0.67
RNF4-210ENST00000508235 CNBD1Q8NA66 436 aa19.24■□□□□ 0.67
RNF4-210ENST00000508235 ZNF428Q96B54 188 aa19.24■□□□□ 0.67
RNF4-210ENST00000508235 CDCA7LQ96GN5 454 aa19.24■□□□□ 0.67
RNF4-210ENST00000508235 SLC4A2P04920 1241 aa19.23■□□□□ 0.67
RNF4-210ENST00000508235 ST5P78524 1137 aa19.23■□□□□ 0.67
RNF4-210ENST00000508235 PARP10Q53GL7 1025 aa19.23■□□□□ 0.67
RNF4-210ENST00000508235 TRMT2AQ8IZ69 625 aaKnown RBP19.23■□□□□ 0.67
RNF4-210ENST00000508235 NYXQ9GZU5 481 aa19.23■□□□□ 0.67
RNF4-210ENST00000508235 PHAXQ9H814 394 aaKnown RBP19.23■□□□□ 0.67
RNF4-210ENST00000508235 ARFGEF2Q9Y6D5 1785 aa19.23■□□□□ 0.67
RNF4-210ENST00000508235 TCIRG1Q13488 830 aa19.22■□□□□ 0.67
RNF4-210ENST00000508235 RIC3Q7Z5B4 369 aa19.22■□□□□ 0.67
RNF4-210ENST00000508235 ZNF34Q8IZ26 560 aa19.22■□□□□ 0.67
RNF4-210ENST00000508235 NLGN2Q8NFZ4 835 aa19.22■□□□□ 0.67
RNF4-210ENST00000508235 ZBED9Q6R2W3 1325 aa19.22■□□□□ 0.67
RNF4-210ENST00000508235 IBTKQ9P2D0 1353 aaPredicted RBP19.21■□□□□ 0.67
RNF4-210ENST00000508235 TCERG1O14776 1098 aaKnown RBP19.21■□□□□ 0.67
RNF4-210ENST00000508235 CT47B1P0C2W7 299 aaPredicted RBP19.21■□□□□ 0.67
RNF4-210ENST00000508235 PRR5LQ6MZQ0 368 aa19.21■□□□□ 0.67
RNF4-210ENST00000508235 PPP1R42Q7Z4L9 355 aa19.21■□□□□ 0.67
RNF4-210ENST00000508235 PDZRN3Q9UPQ7 1066 aa19.21■□□□□ 0.67
RNF4-210ENST00000508235 N4BP2Q86UW6 1770 aaPredicted RBP19.2■□□□□ 0.66
RNF4-210ENST00000508235 GPTP24298 496 aa19.2■□□□□ 0.66
RNF4-210ENST00000508235 GTF2E1P29083 439 aaPredicted RBP19.2■□□□□ 0.66
RNF4-210ENST00000508235 BRIP1Q9BX63 1249 aa19.2■□□□□ 0.66
RNF4-210ENST00000508235 PXDNLA1KZ92 1463 aa19.2■□□□□ 0.66
RNF4-210ENST00000508235 KIAA1551Q9HCM1 1747 aa19.2■□□□□ 0.66
RNF4-210ENST00000508235 PDE6BP35913 854 aa19.19■□□□□ 0.66
RNF4-210ENST00000508235 FLIIQ13045 1269 aa19.18■□□□□ 0.66
RNF4-210ENST00000508235 KSR2Q6VAB6 950 aa19.18■□□□□ 0.66
RNF4-210ENST00000508235 RNF123Q5XPI4 1314 aa19.18■□□□□ 0.66
RNF4-210ENST00000508235 UBN2Q6ZU65 1347 aa19.18■□□□□ 0.66
RNF4-210ENST00000508235 ANKRD31Q8N7Z5 1873 aa19.18■□□□□ 0.66
RNF4-210ENST00000508235 FAM177BA6PVY3 158 aa19.17■□□□□ 0.66
RNF4-210ENST00000508235 SUSD4Q5VX71 490 aa19.17■□□□□ 0.66
RNF4-210ENST00000508235 UTP14AQ9BVJ6 771 aaKnown RBP19.17■□□□□ 0.66
RNF4-210ENST00000508235 DLEC1Q9Y238 1755 aa19.16■□□□□ 0.66
RNF4-210ENST00000508235 BRCA1P38398 1863 aaKnown RBP19.16■□□□□ 0.66
RNF4-210ENST00000508235 A0A0G2JLW4 131 aa19.16■□□□□ 0.66
RNF4-210ENST00000508235 DPEP1P16444 411 aa19.16■□□□□ 0.66
RNF4-210ENST00000508235 NEXNQ0ZGT2 675 aa19.16■□□□□ 0.66
RNF4-210ENST00000508235 FKBP5Q13451 457 aaPredicted RBP19.16■□□□□ 0.66
RNF4-210ENST00000508235 GPR162Q16538 588 aa19.16■□□□□ 0.66
RNF4-210ENST00000508235 PI4KAP2A4QPH2 592 aa19.15■□□□□ 0.66
RNF4-210ENST00000508235 H0YIN7 160 aa19.15■□□□□ 0.66
RNF4-210ENST00000508235 TRIM28Q13263 835 aaKnown RBP19.15■□□□□ 0.66
RNF4-210ENST00000508235 ALDH1L2Q3SY69 923 aa19.15■□□□□ 0.66
RNF4-210ENST00000508235 G2E3Q7L622 706 aa19.15■□□□□ 0.66
RNF4-210ENST00000508235 NLRP10Q86W26 655 aa19.15■□□□□ 0.66
RNF4-210ENST00000508235 PI4KAP1Q8N8J0 262 aa19.15■□□□□ 0.66
RNF4-210ENST00000508235 ISCA1Q9BUE6 129 aa19.15■□□□□ 0.66
RNF4-210ENST00000508235 METTL22Q9BUU2 404 aaPredicted RBP19.15■□□□□ 0.66
RNF4-210ENST00000508235 MAP3K2Q9Y2U5 619 aa19.15■□□□□ 0.66
RNF4-210ENST00000508235 SRCAPQ6ZRS2 3230 aa19.14■□□□□ 0.66
RNF4-210ENST00000508235 NTSR2O95665 410 aa19.14■□□□□ 0.65
RNF4-210ENST00000508235 C2CD5Q86YS7 1000 aa19.14■□□□□ 0.65
RNF4-210ENST00000508235 PELP1Q8IZL8 1130 aaKnown RBP19.14■□□□□ 0.65
RNF4-210ENST00000508235 PIM2Q9P1W9 311 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms