RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 KDM2BQ8NHM5 1336 aa27.45■■□□□ 1.99
CLDND1-216ENST00000507944 RIPK4P57078 832 aa27.45■■□□□ 1.98
CLDND1-216ENST00000507944 NIP7Q9Y221 180 aaKnown RBP eCLIP27.45■■□□□ 1.98
CLDND1-216ENST00000507944 MYBBP1AQ9BQG0 1328 aaKnown RBP27.44■■□□□ 1.98
CLDND1-216ENST00000507944 PRELPP51888 382 aa27.44■■□□□ 1.98
CLDND1-216ENST00000507944 ZNF219Q9P2Y4 722 aaPredicted RBP27.44■■□□□ 1.98
CLDND1-216ENST00000507944 LAMB4A4D0S4 1761 aa27.44■■□□□ 1.98
CLDND1-216ENST00000507944 CCDC88AQ3V6T2 1871 aa27.44■■□□□ 1.98
CLDND1-216ENST00000507944 C21orf2O43822 256 aa27.43■■□□□ 1.98
CLDND1-216ENST00000507944 SRGNP10124 158 aa27.43■■□□□ 1.98
CLDND1-216ENST00000507944 HLFQ16534 295 aa27.43■■□□□ 1.98
CLDND1-216ENST00000507944 STYK1Q6J9G0 422 aa27.43■■□□□ 1.98
CLDND1-216ENST00000507944 TPTE2Q6XPS3 522 aa27.43■■□□□ 1.98
CLDND1-216ENST00000507944 NGEFQ8N5V2 710 aa27.43■■□□□ 1.98
CLDND1-216ENST00000507944 CNKSR1Q969H4 720 aa27.43■■□□□ 1.98
CLDND1-216ENST00000507944 COL11A2P13942 1736 aaPredicted RBP27.43■■□□□ 1.98
CLDND1-216ENST00000507944 NFKBIEO00221 500 aa27.42■■□□□ 1.98
CLDND1-216ENST00000507944 RRP7AQ9Y3A4 280 aaKnown RBP27.42■■□□□ 1.98
CLDND1-216ENST00000507944 ZC3H4Q9UPT8 1303 aaKnown RBP27.41■■□□□ 1.98
CLDND1-216ENST00000507944 TMPOP42166 694 aaKnown RBP27.41■■□□□ 1.98
CLDND1-216ENST00000507944 MASTLQ96GX5 879 aa27.41■■□□□ 1.98
CLDND1-216ENST00000507944 C16orf71Q8IYS4 520 aaPredicted RBP27.4■■□□□ 1.98
CLDND1-216ENST00000507944 RRAGCQ9HB90 399 aa27.4■■□□□ 1.98
CLDND1-216ENST00000507944 TSPYL4Q9UJ04 414 aa27.4■■□□□ 1.98
CLDND1-216ENST00000507944 FAM177BA6PVY3 158 aa27.39■■□□□ 1.98
CLDND1-216ENST00000507944 SLX4Q8IY92 1834 aa27.39■■□□□ 1.97
CLDND1-216ENST00000507944 CEP350Q5VT06 3117 aa27.38■■□□□ 1.97
CLDND1-216ENST00000507944 ERVV-1B6SEH8 477 aa27.38■■□□□ 1.97
CLDND1-216ENST00000507944 MYL6BP14649 208 aa27.38■■□□□ 1.97
CLDND1-216ENST00000507944 LMOD3Q0VAK6 560 aa27.37■■□□□ 1.97
CLDND1-216ENST00000507944 PRPF40BQ6NWY9 871 aaKnown RBP27.37■■□□□ 1.97
CLDND1-216ENST00000507944 RBM46Q8TBY0 533 aaKnown RBP27.37■■□□□ 1.97
CLDND1-216ENST00000507944 FER1L6Q2WGJ9 1857 aa27.36■■□□□ 1.97
CLDND1-216ENST00000507944 TTLL7Q6ZT98 887 aa27.36■■□□□ 1.97
CLDND1-216ENST00000507944 CCDC146Q8IYE0 955 aa27.36■■□□□ 1.97
CLDND1-216ENST00000507944 BABAM1Q9NWV8 329 aa27.36■■□□□ 1.97
CLDND1-216ENST00000507944 MAP3K15Q6ZN16 1313 aa27.36■■□□□ 1.97
CLDND1-216ENST00000507944 KLRG2A4D1S0 409 aaPredicted RBP27.35■■□□□ 1.97
CLDND1-216ENST00000507944 GLTPD2A6NH11 291 aa27.35■■□□□ 1.97
CLDND1-216ENST00000507944 GTF2E1P29083 439 aaPredicted RBP27.35■■□□□ 1.97
CLDND1-216ENST00000507944 KIF6Q6ZMV9 814 aa27.35■■□□□ 1.97
CLDND1-216ENST00000507944 CACNA1SQ13698 1873 aa27.35■■□□□ 1.97
CLDND1-216ENST00000507944 NUP98P52948 1817 aa27.34■■□□□ 1.97
CLDND1-216ENST00000507944 NPR1P16066 1061 aa27.34■■□□□ 1.97
CLDND1-216ENST00000507944 WDR43Q15061 677 aaKnown RBP eCLIP27.34■■□□□ 1.97
CLDND1-216ENST00000507944 NEUROD2Q15784 382 aa27.34■■□□□ 1.97
CLDND1-216ENST00000507944 SOGA3Q5TF21 947 aa27.33■■□□□ 1.97
CLDND1-216ENST00000507944 TAOK3Q9H2K8 898 aa27.33■■□□□ 1.97
CLDND1-216ENST00000507944 ERBB4Q15303 1308 aa27.33■■□□□ 1.97
CLDND1-216ENST00000507944 APLP1P51693 650 aa27.32■■□□□ 1.96
CLDND1-216ENST00000507944 RUNDC1Q96C34 613 aa27.32■■□□□ 1.96
CLDND1-216ENST00000507944 TNRC6CQ9HCJ0 1690 aaKnown RBP27.32■■□□□ 1.96
CLDND1-216ENST00000507944 LTBP3Q9NS15 1303 aa27.32■■□□□ 1.96
CLDND1-216ENST00000507944 ARFGEF2Q9Y6D5 1785 aa27.31■■□□□ 1.96
CLDND1-216ENST00000507944 EIF2S2P20042 333 aaKnown RBP27.31■■□□□ 1.96
CLDND1-216ENST00000507944 ERFEQ4G0M1 354 aa27.31■■□□□ 1.96
CLDND1-216ENST00000507944 C7orf43Q8WVR3 580 aa27.31■■□□□ 1.96
CLDND1-216ENST00000507944 NYXQ9GZU5 481 aa27.31■■□□□ 1.96
CLDND1-216ENST00000507944 ZBTB3Q9H5J0 574 aa27.31■■□□□ 1.96
CLDND1-216ENST00000507944 DICER1Q9UPY3 1922 aaKnown RBP27.31■■□□□ 1.96
CLDND1-216ENST00000507944 TIAM2Q8IVF5 1701 aa27.3■■□□□ 1.96
CLDND1-216ENST00000507944 VEGFAP15692 232 aaPredicted RBP27.29■■□□□ 1.96
CLDND1-216ENST00000507944 FSTL1Q12841 308 aa27.29■■□□□ 1.96
CLDND1-216ENST00000507944 DPY19L2Q6NUT2 758 aa27.29■■□□□ 1.96
CLDND1-216ENST00000507944 PRKRIP1Q9H875 184 aaPredicted RBP27.29■■□□□ 1.96
CLDND1-216ENST00000507944 ADAMTS8Q9UP79 889 aa27.29■■□□□ 1.96
CLDND1-216ENST00000507944 GPTP24298 496 aa27.28■■□□□ 1.96
CLDND1-216ENST00000507944 PDIA6Q15084 440 aa27.28■■□□□ 1.96
CLDND1-216ENST00000507944 NUTM1Q86Y26 1132 aa27.28■■□□□ 1.96
CLDND1-216ENST00000507944 GIGYF2Q6Y7W6 1299 aaKnown RBP27.27■■□□□ 1.96
CLDND1-216ENST00000507944 TRIM35Q9UPQ4 493 aa27.27■■□□□ 1.96
CLDND1-216ENST00000507944 ALDH1B1P30837 517 aa27.26■■□□□ 1.95
CLDND1-216ENST00000507944 CCDC93Q567U6 631 aa27.26■■□□□ 1.95
CLDND1-216ENST00000507944 LRP10Q7Z4F1 713 aa27.26■■□□□ 1.95
CLDND1-216ENST00000507944 ZNF34Q8IZ26 560 aa27.26■■□□□ 1.95
CLDND1-216ENST00000507944 UBN2Q6ZU65 1347 aa27.25■■□□□ 1.95
CLDND1-216ENST00000507944 CHL1O00533 1208 aa27.25■■□□□ 1.95
CLDND1-216ENST00000507944 SUSD4Q5VX71 490 aa27.25■■□□□ 1.95
CLDND1-216ENST00000507944 ABCC12Q96J65 1359 aa27.24■■□□□ 1.95
CLDND1-216ENST00000507944 ANXA1P04083 346 aa27.24■■□□□ 1.95
CLDND1-216ENST00000507944 PROSER3Q2NL68 480 aa27.24■■□□□ 1.95
CLDND1-216ENST00000507944 SMC1BQ8NDV3 1235 aa27.24■■□□□ 1.95
CLDND1-216ENST00000507944 LAS1LQ9Y4W2 734 aaKnown RBP27.24■■□□□ 1.95
CLDND1-216ENST00000507944 CRY2Q49AN0 593 aa27.23■■□□□ 1.95
CLDND1-216ENST00000507944 IBTKQ9P2D0 1353 aaPredicted RBP27.22■■□□□ 1.95
CLDND1-216ENST00000507944 OLFM4Q6UX06 510 aa27.22■■□□□ 1.95
CLDND1-216ENST00000507944 NECTIN2Q92692 538 aa27.22■■□□□ 1.95
CLDND1-216ENST00000507944 POTECB2RU33 542 aa27.21■■□□□ 1.95
CLDND1-216ENST00000507944 FKBP4Q02790 459 aaKnown RBP eCLIP27.21■■□□□ 1.95
CLDND1-216ENST00000507944 RTKN2Q8IZC4 609 aa27.21■■□□□ 1.95
CLDND1-216ENST00000507944 KRT24Q2M2I5 525 aa27.2■■□□□ 1.94
CLDND1-216ENST00000507944 PARP10Q53GL7 1025 aa27.2■■□□□ 1.94
CLDND1-216ENST00000507944 PPP1R42Q7Z4L9 355 aa27.2■■□□□ 1.94
CLDND1-216ENST00000507944 DNAJC5GQ8N7S2 189 aa27.2■■□□□ 1.94
CLDND1-216ENST00000507944 NTSR2O95665 410 aa27.19■■□□□ 1.94
CLDND1-216ENST00000507944 COPS6Q7L5N1 327 aa27.19■■□□□ 1.94
CLDND1-216ENST00000507944 WDR90Q96KV7 1748 aa27.19■■□□□ 1.94
CLDND1-216ENST00000507944 AIMP1Q12904 312 aaKnown RBP27.18■■□□□ 1.94
CLDND1-216ENST00000507944 RPGRQ92834 1020 aaKnown RBP27.18■■□□□ 1.94
CLDND1-216ENST00000507944 ZNF277Q9NRM2 450 aaPredicted RBP27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms