RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 NRXN2Q9P2S2 1712 aa23.19■■□□□ 1.3
SMN1-204ENST00000506163 A0A0G2JLW4 131 aa23.18■■□□□ 1.3
SMN1-204ENST00000506163 HOXB7P09629 217 aa23.18■■□□□ 1.3
SMN1-204ENST00000506163 TSPYL6Q8N831 410 aa23.18■■□□□ 1.3
SMN1-204ENST00000506163 WWC3Q9ULE0 1092 aa23.18■■□□□ 1.3
SMN1-204ENST00000506163 PXDNLA1KZ92 1463 aa23.18■■□□□ 1.3
SMN1-204ENST00000506163 IL16Q14005 1332 aa23.18■■□□□ 1.3
SMN1-204ENST00000506163 DPEP1P16444 411 aa23.16■■□□□ 1.3
SMN1-204ENST00000506163 KCNA3P22001 575 aa23.16■■□□□ 1.3
SMN1-204ENST00000506163 TGFB2P61812 414 aa23.16■■□□□ 1.3
SMN1-204ENST00000506163 HDGFL1Q5TGJ6 251 aa23.16■■□□□ 1.3
SMN1-204ENST00000506163 WDR63Q8IWG1 891 aa23.16■■□□□ 1.3
SMN1-204ENST00000506163 DDX21Q9NR30 783 aaKnown RBP eCLIP23.16■■□□□ 1.3
SMN1-204ENST00000506163 CHPF2Q9P2E5 772 aa23.16■■□□□ 1.3
SMN1-204ENST00000506163 MAP3K15Q6ZN16 1313 aa23.16■■□□□ 1.3
SMN1-204ENST00000506163 N4BP2Q86UW6 1770 aaPredicted RBP23.16■■□□□ 1.3
SMN1-204ENST00000506163 CARMIL3Q8ND23 1372 aa23.16■■□□□ 1.3
SMN1-204ENST00000506163 ERVV-1B6SEH8 477 aa23.16■■□□□ 1.3
SMN1-204ENST00000506163 GPR162Q16538 588 aa23.16■■□□□ 1.3
SMN1-204ENST00000506163 PELP1Q8IZL8 1130 aaKnown RBP23.16■■□□□ 1.3
SMN1-204ENST00000506163 CCDC24Q8N4L8 307 aa23.16■■□□□ 1.3
SMN1-204ENST00000506163 SETDB2Q96T68 719 aa23.16■■□□□ 1.3
SMN1-204ENST00000506163 ZBTB3Q9H5J0 574 aa23.16■■□□□ 1.3
SMN1-204ENST00000506163 RGL2O15211 777 aa23.14■■□□□ 1.29
SMN1-204ENST00000506163 COPS6Q7L5N1 327 aa23.14■■□□□ 1.29
SMN1-204ENST00000506163 XAGE3Q8WTP9 111 aa23.14■■□□□ 1.29
SMN1-204ENST00000506163 ZNF521Q96K83 1311 aa23.13■■□□□ 1.29
SMN1-204ENST00000506163 CHRNA5P30532 468 aa23.13■■□□□ 1.29
SMN1-204ENST00000506163 PRR5LQ6MZQ0 368 aa23.13■■□□□ 1.29
SMN1-204ENST00000506163 NIP7Q9Y221 180 aaKnown RBP eCLIP23.13■■□□□ 1.29
SMN1-204ENST00000506163 ZNF652Q9Y2D9 606 aa23.13■■□□□ 1.29
SMN1-204ENST00000506163 NUP98P52948 1817 aa23.12■■□□□ 1.29
SMN1-204ENST00000506163 DCAF8L1A6NGE4 600 aa23.12■■□□□ 1.29
SMN1-204ENST00000506163 AIMP1Q12904 312 aaKnown RBP23.12■■□□□ 1.29
SMN1-204ENST00000506163 KIF6Q6ZMV9 814 aa23.12■■□□□ 1.29
SMN1-204ENST00000506163 FANCIQ9NVI1 1328 aa23.12■■□□□ 1.29
SMN1-204ENST00000506163 GIGYF2Q6Y7W6 1299 aaKnown RBP23.1■■□□□ 1.29
SMN1-204ENST00000506163 DBF4Q9UBU7 674 aaPredicted RBP23.1■■□□□ 1.29
SMN1-204ENST00000506163 UBN2Q6ZU65 1347 aa23.09■■□□□ 1.29
SMN1-204ENST00000506163 ZNF34Q8IZ26 560 aa23.08■■□□□ 1.29
SMN1-204ENST00000506163 ANKRD31Q8N7Z5 1873 aa23.08■■□□□ 1.29
SMN1-204ENST00000506163 FAM177BA6PVY3 158 aa23.08■■□□□ 1.28
SMN1-204ENST00000506163 GPTP24298 496 aa23.08■■□□□ 1.28
SMN1-204ENST00000506163 NBPF5PQ86XG9 351 aaPredicted RBP23.08■■□□□ 1.28
SMN1-204ENST00000506163 CNBD1Q8NA66 436 aa23.08■■□□□ 1.28
SMN1-204ENST00000506163 PHAXQ9H814 394 aaKnown RBP23.08■■□□□ 1.28
SMN1-204ENST00000506163 ATP10DQ9P241 1426 aa23.07■■□□□ 1.28
SMN1-204ENST00000506163 BRCA1P38398 1863 aaKnown RBP23.07■■□□□ 1.28
SMN1-204ENST00000506163 TCERG1O14776 1098 aaKnown RBP23.06■■□□□ 1.28
SMN1-204ENST00000506163 TWISTNBQ3B726 338 aaPredicted RBP23.06■■□□□ 1.28
SMN1-204ENST00000506163 BRIP1Q9BX63 1249 aa23.06■■□□□ 1.28
SMN1-204ENST00000506163 HYPKQ9NX55 129 aa23.06■■□□□ 1.28
SMN1-204ENST00000506163 EXOSC9Q06265 439 aaKnown RBP23.05■■□□□ 1.28
SMN1-204ENST00000506163 SUSD4Q5VX71 490 aa23.05■■□□□ 1.28
SMN1-204ENST00000506163 VAMP4O75379 141 aa23.04■■□□□ 1.28
SMN1-204ENST00000506163 C2CD5Q86YS7 1000 aa23.04■■□□□ 1.28
SMN1-204ENST00000506163 PIM2Q9P1W9 311 aa23.04■■□□□ 1.28
SMN1-204ENST00000506163 BCS1LQ9Y276 419 aa23.04■■□□□ 1.28
SMN1-204ENST00000506163 GRIN3BO60391 1043 aa23.03■■□□□ 1.28
SMN1-204ENST00000506163 GOLGA2Q08379 1002 aa23.03■■□□□ 1.28
SMN1-204ENST00000506163 CCDC30Q5VVM6 783 aa23.03■■□□□ 1.28
SMN1-204ENST00000506163 TPTE2Q6XPS3 522 aa23.03■■□□□ 1.28
SMN1-204ENST00000506163 ANKRD13DQ6ZTN6 518 aa23.03■■□□□ 1.28
SMN1-204ENST00000506163 NUTM1Q86Y26 1132 aa23.03■■□□□ 1.28
SMN1-204ENST00000506163 TCIRG1Q13488 830 aa23.02■■□□□ 1.28
SMN1-204ENST00000506163 PLBD2Q8NHP8 589 aa23.02■■□□□ 1.28
SMN1-204ENST00000506163 NPHP1O15259 732 aa23■■□□□ 1.27
SMN1-204ENST00000506163 NTSR2O95665 410 aa23■■□□□ 1.27
SMN1-204ENST00000506163 PDE6BP35913 854 aa23■■□□□ 1.27
SMN1-204ENST00000506163 ST5P78524 1137 aa23■■□□□ 1.27
SMN1-204ENST00000506163 ERFEQ4G0M1 354 aa23■■□□□ 1.27
SMN1-204ENST00000506163 CDCA7LQ96GN5 454 aa23■■□□□ 1.27
SMN1-204ENST00000506163 MYH16Q9H6N6 1097 aa23■■□□□ 1.27
SMN1-204ENST00000506163 ABCC12Q96J65 1359 aa23■■□□□ 1.27
SMN1-204ENST00000506163 KLRG2A4D1S0 409 aaPredicted RBP22.99■■□□□ 1.27
SMN1-204ENST00000506163 H0YIN7 160 aa22.99■■□□□ 1.27
SMN1-204ENST00000506163 DALRD3Q5D0E6 543 aaKnown RBP22.99■■□□□ 1.27
SMN1-204ENST00000506163 G2E3Q7L622 706 aa22.99■■□□□ 1.27
SMN1-204ENST00000506163 ZNF428Q96B54 188 aa22.99■■□□□ 1.27
SMN1-204ENST00000506163 COL11A2P13942 1736 aaPredicted RBP22.99■■□□□ 1.27
SMN1-204ENST00000506163 NLRP10Q86W26 655 aa22.99■■□□□ 1.27
SMN1-204ENST00000506163 CHD4Q14839 1912 aa22.98■■□□□ 1.27
SMN1-204ENST00000506163 SRGNP10124 158 aa22.98■■□□□ 1.27
SMN1-204ENST00000506163 YY1P25490 414 aa22.98■■□□□ 1.27
SMN1-204ENST00000506163 PARP10Q53GL7 1025 aa22.98■■□□□ 1.27
SMN1-204ENST00000506163 SYNE4Q8N205 404 aa22.98■■□□□ 1.27
SMN1-204ENST00000506163 DLEC1Q9Y238 1755 aa22.98■■□□□ 1.27
SMN1-204ENST00000506163 SLC4A2P04920 1241 aa22.97■■□□□ 1.27
SMN1-204ENST00000506163 SLFN5Q08AF3 891 aa22.97■■□□□ 1.27
SMN1-204ENST00000506163 ISCA1Q9BUE6 129 aa22.97■■□□□ 1.27
SMN1-204ENST00000506163 NYXQ9GZU5 481 aa22.97■■□□□ 1.27
SMN1-204ENST00000506163 IBTKQ9P2D0 1353 aaPredicted RBP22.97■■□□□ 1.27
SMN1-204ENST00000506163 ATP5J2-PTCD1G3V325 749 aa22.96■■□□□ 1.27
SMN1-204ENST00000506163 GTF2E1P29083 439 aaPredicted RBP22.96■■□□□ 1.27
SMN1-204ENST00000506163 HSP90AB3PQ58FF7 597 aa22.96■■□□□ 1.27
SMN1-204ENST00000506163 C3orf67Q6ZVT6 689 aa22.96■■□□□ 1.27
SMN1-204ENST00000506163 TTLL6Q8N841 843 aa22.96■■□□□ 1.27
SMN1-204ENST00000506163 ZNF622Q969S3 477 aaKnown RBP eCLIP22.96■■□□□ 1.27
SMN1-204ENST00000506163 ANKRD36CQ5JPF3 1778 aa22.95■■□□□ 1.26
SMN1-204ENST00000506163 PPP1R42Q7Z4L9 355 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms