RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 GLTPD2A6NH11 291 aa12.58□□□□□ -0.4
PTPN20-216ENST00000506080 SLC39A6Q13433 755 aa12.58□□□□□ -0.4
PTPN20-216ENST00000506080 NFIXQ14938 502 aa12.58□□□□□ -0.4
PTPN20-216ENST00000506080 PANK3Q9H999 370 aa12.58□□□□□ -0.4
PTPN20-216ENST00000506080 ADAMTS7Q9UKP4 1686 aa12.58□□□□□ -0.4
PTPN20-216ENST00000506080 HSPA1AP0DMV8 641 aaKnown RBP12.57□□□□□ -0.4
PTPN20-216ENST00000506080 HSPA1BP0DMV9 641 aaKnown RBP12.57□□□□□ -0.4
PTPN20-216ENST00000506080 VEGFAP15692 232 aaPredicted RBP12.57□□□□□ -0.4
PTPN20-216ENST00000506080 LMNB1P20700 586 aa12.57□□□□□ -0.4
PTPN20-216ENST00000506080 MORC1Q86VD1 984 aa12.57□□□□□ -0.4
PTPN20-216ENST00000506080 OCEL1Q9H607 264 aa12.57□□□□□ -0.4
PTPN20-216ENST00000506080 LGR6Q9HBX8 967 aa12.57□□□□□ -0.4
PTPN20-216ENST00000506080 SERPINB2P05120 415 aa12.56□□□□□ -0.4
PTPN20-216ENST00000506080 CYP19A1P11511 503 aaPredicted RBP12.56□□□□□ -0.4
PTPN20-216ENST00000506080 AKAP4Q5JQC9 854 aa12.56□□□□□ -0.4
PTPN20-216ENST00000506080 C2CD5Q86YS7 1000 aa12.56□□□□□ -0.4
PTPN20-216ENST00000506080 SLC52A2Q9HAB3 445 aa12.56□□□□□ -0.4
PTPN20-216ENST00000506080 NARFQ9UHQ1 456 aa12.56□□□□□ -0.4
PTPN20-216ENST00000506080 ZBTB1Q9Y2K1 713 aa12.56□□□□□ -0.4
PTPN20-216ENST00000506080 ZC3H4Q9UPT8 1303 aaKnown RBP12.56□□□□□ -0.4
PTPN20-216ENST00000506080 COL15A1P39059 1388 aa12.56□□□□□ -0.4
PTPN20-216ENST00000506080 AFDNP55196 1824 aaKnown RBP12.56□□□□□ -0.4
PTPN20-216ENST00000506080 TTLL6Q8N841 843 aa12.55□□□□□ -0.4
PTPN20-216ENST00000506080 BCL2L12Q9HB09 334 aa12.55□□□□□ -0.4
PTPN20-216ENST00000506080 SCN11AQ9UI33 1791 aa12.55□□□□□ -0.4
PTPN20-216ENST00000506080 NFKBIEO00221 500 aa12.54□□□□□ -0.4
PTPN20-216ENST00000506080 IL13P35225 146 aa12.54□□□□□ -0.4
PTPN20-216ENST00000506080 BICDL1Q6ZP65 573 aa12.54□□□□□ -0.4
PTPN20-216ENST00000506080 CARMIL3Q8ND23 1372 aa12.54□□□□□ -0.4
PTPN20-216ENST00000506080 POTECB2RU33 542 aa12.54□□□□□ -0.4
PTPN20-216ENST00000506080 H0YIN7 160 aa12.54□□□□□ -0.4
PTPN20-216ENST00000506080 RNMTO43148 476 aaKnown RBP12.54□□□□□ -0.4
PTPN20-216ENST00000506080 CANXP27824 592 aaKnown RBP12.54□□□□□ -0.4
PTPN20-216ENST00000506080 PDAP1Q13442 181 aaKnown RBP12.54□□□□□ -0.4
PTPN20-216ENST00000506080 NRXN2Q9P2S2 1712 aa12.53□□□□□ -0.4
PTPN20-216ENST00000506080 PCNTO95613 3336 aa12.53□□□□□ -0.4
PTPN20-216ENST00000506080 ZNF622Q969S3 477 aaKnown RBP eCLIP12.53□□□□□ -0.4
PTPN20-216ENST00000506080 TIAM2Q8IVF5 1701 aa12.53□□□□□ -0.4
PTPN20-216ENST00000506080 CCDC88AQ3V6T2 1871 aa12.52□□□□□ -0.4
PTPN20-216ENST00000506080 DLEC1Q9Y238 1755 aa12.52□□□□□ -0.41
PTPN20-216ENST00000506080 HMOX1P09601 288 aa12.52□□□□□ -0.41
PTPN20-216ENST00000506080 HSPA5P11021 654 aaKnown RBP12.52□□□□□ -0.41
PTPN20-216ENST00000506080 GOLGA2Q08379 1002 aa12.52□□□□□ -0.41
PTPN20-216ENST00000506080 C21orf2O43822 256 aa12.51□□□□□ -0.41
PTPN20-216ENST00000506080 DPY19L2Q6NUT2 758 aa12.51□□□□□ -0.41
PTPN20-216ENST00000506080 CCDC24Q8N4L8 307 aa12.51□□□□□ -0.41
PTPN20-216ENST00000506080 FAM163AQ96GL9 167 aaPredicted RBP12.51□□□□□ -0.41
PTPN20-216ENST00000506080 TIMELESSQ9UNS1 1208 aa12.51□□□□□ -0.41
PTPN20-216ENST00000506080 MRC1P22897 1456 aa12.51□□□□□ -0.41
PTPN20-216ENST00000506080 EIF4G2P78344 907 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTPN20-216ENST00000506080 MKRN3Q13064 507 aaKnown RBP12.5□□□□□ -0.41
PTPN20-216ENST00000506080 ERFEQ4G0M1 354 aa12.5□□□□□ -0.41
PTPN20-216ENST00000506080 LCE2DQ5TA82 110 aaPredicted RBP12.5□□□□□ -0.41
PTPN20-216ENST00000506080 TBC1D9BQ66K14 1250 aa12.5□□□□□ -0.41
PTPN20-216ENST00000506080 POTEMA6NI47 508 aa12.49□□□□□ -0.41
PTPN20-216ENST00000506080 MTHFSDQ2M296 383 aaKnown RBP12.49□□□□□ -0.41
PTPN20-216ENST00000506080 VSIG10Q8N0Z9 540 aa12.49□□□□□ -0.41
PTPN20-216ENST00000506080 PDCD7Q8N8D1 485 aaKnown RBP12.49□□□□□ -0.41
PTPN20-216ENST00000506080 MKRN1Q9UHC7 482 aaKnown RBP12.49□□□□□ -0.41
PTPN20-216ENST00000506080 ZNF330Q9Y3S2 320 aaPredicted RBP12.49□□□□□ -0.41
PTPN20-216ENST00000506080 KNSTRNQ9Y448 316 aa12.49□□□□□ -0.41
PTPN20-216ENST00000506080 EIF5P55010 431 aaKnown RBP12.48□□□□□ -0.41
PTPN20-216ENST00000506080 SLAIN1Q8ND83 568 aa12.48□□□□□ -0.41
PTPN20-216ENST00000506080 A0A087WZG4 1122 aa12.47□□□□□ -0.41
PTPN20-216ENST00000506080 DDNO94850 711 aaPredicted RBP12.47□□□□□ -0.41
PTPN20-216ENST00000506080 STARD3NLO95772 234 aa12.47□□□□□ -0.41
PTPN20-216ENST00000506080 PDE6BP35913 854 aa12.47□□□□□ -0.41
PTPN20-216ENST00000506080 PRR5LQ6MZQ0 368 aa12.47□□□□□ -0.41
PTPN20-216ENST00000506080 POTEGQ6S5H5 508 aa12.47□□□□□ -0.41
PTPN20-216ENST00000506080 TTC5Q8N0Z6 440 aa12.47□□□□□ -0.41
PTPN20-216ENST00000506080 ANKRD31Q8N7Z5 1873 aa12.47□□□□□ -0.41
PTPN20-216ENST00000506080 BRIP1Q9BX63 1249 aa12.47□□□□□ -0.41
PTPN20-216ENST00000506080 TBC1D2BQ9UPU7 963 aa12.47□□□□□ -0.41
PTPN20-216ENST00000506080 VIRMAQ69YN4 1812 aaKnown RBP12.47□□□□□ -0.41
PTPN20-216ENST00000506080 TRIM26Q12899 539 aaPredicted RBP12.46□□□□□ -0.41
PTPN20-216ENST00000506080 NPHP1O15259 732 aa12.45□□□□□ -0.42
PTPN20-216ENST00000506080 ZNF496Q96IT1 587 aaPredicted RBP12.45□□□□□ -0.42
PTPN20-216ENST00000506080 TAOK3Q9H2K8 898 aa12.45□□□□□ -0.42
PTPN20-216ENST00000506080 PDZRN3Q9UPQ7 1066 aa12.45□□□□□ -0.42
PTPN20-216ENST00000506080 COL11A2P13942 1736 aaPredicted RBP12.45□□□□□ -0.42
PTPN20-216ENST00000506080 FOXN1O15353 648 aa12.45□□□□□ -0.42
PTPN20-216ENST00000506080 AMER1Q5JTC6 1135 aaPredicted RBP12.45□□□□□ -0.42
PTPN20-216ENST00000506080 UBR2Q8IWV8 1755 aa12.44□□□□□ -0.42
PTPN20-216ENST00000506080 FER1L6Q2WGJ9 1857 aa12.44□□□□□ -0.42
PTPN20-216ENST00000506080 LTBP3Q9NS15 1303 aa12.44□□□□□ -0.42
PTPN20-216ENST00000506080 DICER1Q9UPY3 1922 aaKnown RBP12.44□□□□□ -0.42
PTPN20-216ENST00000506080 DIAPH1O60610 1272 aaKnown RBP12.44□□□□□ -0.42
PTPN20-216ENST00000506080 TEFQ10587 303 aa12.44□□□□□ -0.42
PTPN20-216ENST00000506080 PRPF40BQ6NWY9 871 aaKnown RBP12.44□□□□□ -0.42
PTPN20-216ENST00000506080 CNBD1Q8NA66 436 aa12.44□□□□□ -0.42
PTPN20-216ENST00000506080 CNKSR1Q969H4 720 aa12.44□□□□□ -0.42
PTPN20-216ENST00000506080 PCGF6Q9BYE7 350 aa12.44□□□□□ -0.42
PTPN20-216ENST00000506080 HEG1Q9ULI3 1381 aa12.44□□□□□ -0.42
PTPN20-216ENST00000506080 SCN7AQ01118 1682 aa12.43□□□□□ -0.42
PTPN20-216ENST00000506080 A1BGP04217 495 aa12.43□□□□□ -0.42
PTPN20-216ENST00000506080 ZNF790Q6PG37 636 aa12.43□□□□□ -0.42
PTPN20-216ENST00000506080 NPM2Q86SE8 214 aaKnown RBP12.43□□□□□ -0.42
PTPN20-216ENST00000506080 SETDB2Q96T68 719 aa12.43□□□□□ -0.42
PTPN20-216ENST00000506080 SLX4Q8IY92 1834 aa12.42□□□□□ -0.42
PTPN20-216ENST00000506080 CNTNAP1P78357 1384 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms