RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 PRR5LQ6MZQ0 368 aa17.95■□□□□ 0.46
HOXC6-203ENST00000504315 PDZRN3Q9UPQ7 1066 aa17.95■□□□□ 0.46
HOXC6-203ENST00000504315 CHL1O00533 1208 aa17.94■□□□□ 0.46
HOXC6-203ENST00000504315 BRIP1Q9BX63 1249 aa17.94■□□□□ 0.46
HOXC6-203ENST00000504315 NEUROD2Q15784 382 aa17.93■□□□□ 0.46
HOXC6-203ENST00000504315 CNBD1Q8NA66 436 aa17.93■□□□□ 0.46
HOXC6-203ENST00000504315 ERVV-1B6SEH8 477 aa17.92■□□□□ 0.46
HOXC6-203ENST00000504315 LRP10Q7Z4F1 713 aa17.92■□□□□ 0.46
HOXC6-203ENST00000504315 TNRC6CQ9HCJ0 1690 aaKnown RBP17.91■□□□□ 0.46
HOXC6-203ENST00000504315 H0YIN7 160 aa17.91■□□□□ 0.46
HOXC6-203ENST00000504315 PDE6BP35913 854 aa17.91■□□□□ 0.46
HOXC6-203ENST00000504315 HLFQ16534 295 aa17.91■□□□□ 0.46
HOXC6-203ENST00000504315 ARHGAP27Q6ZUM4 889 aa17.91■□□□□ 0.46
HOXC6-203ENST00000504315 C2CD5Q86YS7 1000 aa17.91■□□□□ 0.46
HOXC6-203ENST00000504315 MAP3K15Q6ZN16 1313 aa17.91■□□□□ 0.46
HOXC6-203ENST00000504315 TIAM2Q8IVF5 1701 aa17.9■□□□□ 0.46
HOXC6-203ENST00000504315 TTLL6Q8N841 843 aa17.9■□□□□ 0.46
HOXC6-203ENST00000504315 APAF1O14727 1248 aa17.89■□□□□ 0.45
HOXC6-203ENST00000504315 ST5P78524 1137 aa17.89■□□□□ 0.45
HOXC6-203ENST00000504315 PDIA6Q15084 440 aa17.89■□□□□ 0.45
HOXC6-203ENST00000504315 CCDC184Q52MB2 194 aa17.89■□□□□ 0.45
HOXC6-203ENST00000504315 TTLL7Q6ZT98 887 aa17.89■□□□□ 0.45
HOXC6-203ENST00000504315 NBPF5PQ86XG9 351 aaPredicted RBP17.89■□□□□ 0.45
HOXC6-203ENST00000504315 NIP7Q9Y221 180 aaKnown RBP eCLIP17.89■□□□□ 0.45
HOXC6-203ENST00000504315 IBTKQ9P2D0 1353 aaPredicted RBP17.89■□□□□ 0.45
HOXC6-203ENST00000504315 CCDC24Q8N4L8 307 aa17.88■□□□□ 0.45
HOXC6-203ENST00000504315 CFAP44Q96MT7 982 aa17.88■□□□□ 0.45
HOXC6-203ENST00000504315 CACNA1FO60840 1977 aa17.88■□□□□ 0.45
HOXC6-203ENST00000504315 KLRG2A4D1S0 409 aaPredicted RBP17.87■□□□□ 0.45
HOXC6-203ENST00000504315 HOXB7P09629 217 aa17.87■□□□□ 0.45
HOXC6-203ENST00000504315 ZNF853P0CG23 659 aa17.87■□□□□ 0.45
HOXC6-203ENST00000504315 MYL6BP14649 208 aa17.87■□□□□ 0.45
HOXC6-203ENST00000504315 KIF6Q6ZMV9 814 aa17.87■□□□□ 0.45
HOXC6-203ENST00000504315 RIC1Q4ADV7 1423 aa17.87■□□□□ 0.45
HOXC6-203ENST00000504315 LAMB2P55268 1798 aa17.86■□□□□ 0.45
HOXC6-203ENST00000504315 SRGNP10124 158 aa17.86■□□□□ 0.45
HOXC6-203ENST00000504315 EIF2S2P20042 333 aaKnown RBP17.86■□□□□ 0.45
HOXC6-203ENST00000504315 TPTE2Q6XPS3 522 aa17.86■□□□□ 0.45
HOXC6-203ENST00000504315 NGEFQ8N5V2 710 aa17.86■□□□□ 0.45
HOXC6-203ENST00000504315 GPBP1L1Q9HC44 474 aaPredicted RBP17.86■□□□□ 0.45
HOXC6-203ENST00000504315 NPHP1O15259 732 aa17.85■□□□□ 0.45
HOXC6-203ENST00000504315 C1QTNF8P60827 252 aa17.85■□□□□ 0.45
HOXC6-203ENST00000504315 KRT24Q2M2I5 525 aa17.85■□□□□ 0.45
HOXC6-203ENST00000504315 PROSER3Q2NL68 480 aa17.85■□□□□ 0.45
HOXC6-203ENST00000504315 STYK1Q6J9G0 422 aa17.85■□□□□ 0.45
HOXC6-203ENST00000504315 GIGYF2Q6Y7W6 1299 aaKnown RBP17.85■□□□□ 0.45
HOXC6-203ENST00000504315 UBN2Q6ZU65 1347 aa17.84■□□□□ 0.45
HOXC6-203ENST00000504315 ANP32CO43423 234 aa17.84■□□□□ 0.45
HOXC6-203ENST00000504315 C9orf131Q5VYM1 1079 aa17.84■□□□□ 0.45
HOXC6-203ENST00000504315 ZNF34Q8IZ26 560 aa17.84■□□□□ 0.45
HOXC6-203ENST00000504315 CNKSR1Q969H4 720 aa17.84■□□□□ 0.45
HOXC6-203ENST00000504315 ZNF622Q969S3 477 aaKnown RBP eCLIP17.84■□□□□ 0.45
HOXC6-203ENST00000504315 MASTLQ96GX5 879 aa17.84■□□□□ 0.45
HOXC6-203ENST00000504315 MBIPQ9NS73 344 aa17.84■□□□□ 0.45
HOXC6-203ENST00000504315 IFT57Q9NWB7 429 aa17.84■□□□□ 0.45
HOXC6-203ENST00000504315 ZC3H4Q9UPT8 1303 aaKnown RBP17.83■□□□□ 0.44
HOXC6-203ENST00000504315 CALD1Q05682 793 aaKnown RBP17.83■□□□□ 0.44
HOXC6-203ENST00000504315 NYXQ9GZU5 481 aa17.83■□□□□ 0.44
HOXC6-203ENST00000504315 ZBTB3Q9H5J0 574 aa17.83■□□□□ 0.44
HOXC6-203ENST00000504315 DDX21Q9NR30 783 aaKnown RBP eCLIP17.83■□□□□ 0.44
HOXC6-203ENST00000504315 LAS1LQ9Y4W2 734 aaKnown RBP17.83■□□□□ 0.44
HOXC6-203ENST00000504315 ABCC12Q96J65 1359 aa17.82■□□□□ 0.44
HOXC6-203ENST00000504315 ANXA1P04083 346 aa17.82■□□□□ 0.44
HOXC6-203ENST00000504315 NFKBIEO00221 500 aa17.81■□□□□ 0.44
HOXC6-203ENST00000504315 PRELPP51888 382 aa17.81■□□□□ 0.44
HOXC6-203ENST00000504315 RASSF7Q02833 373 aa17.81■□□□□ 0.44
HOXC6-203ENST00000504315 CCDC27Q2M243 656 aa17.81■□□□□ 0.44
HOXC6-203ENST00000504315 NCBP3Q53F19 620 aaKnown RBP17.81■□□□□ 0.44
HOXC6-203ENST00000504315 RNF181Q9P0P0 153 aa17.81■□□□□ 0.44
HOXC6-203ENST00000504315 LTBP3Q9NS15 1303 aa17.8■□□□□ 0.44
HOXC6-203ENST00000504315 KIF3CO14782 793 aa17.8■□□□□ 0.44
HOXC6-203ENST00000504315 NPR1P16066 1061 aa17.8■□□□□ 0.44
HOXC6-203ENST00000504315 LMNB1P20700 586 aa17.8■□□□□ 0.44
HOXC6-203ENST00000504315 GNAI1P63096 354 aa17.8■□□□□ 0.44
HOXC6-203ENST00000504315 CRY2Q49AN0 593 aa17.8■□□□□ 0.44
HOXC6-203ENST00000504315 PRPF40BQ6NWY9 871 aaKnown RBP17.8■□□□□ 0.44
HOXC6-203ENST00000504315 ZNF526Q8TF50 670 aaPredicted RBP17.8■□□□□ 0.44
HOXC6-203ENST00000504315 MRS2Q9HD23 443 aa17.8■□□□□ 0.44
HOXC6-203ENST00000504315 DDX60Q8IY21 1712 aaKnown RBP17.8■□□□□ 0.44
HOXC6-203ENST00000504315 NTSR2O95665 410 aa17.79■□□□□ 0.44
HOXC6-203ENST00000504315 PARP10Q53GL7 1025 aa17.79■□□□□ 0.44
HOXC6-203ENST00000504315 HDGFL1Q5TGJ6 251 aa17.79■□□□□ 0.44
HOXC6-203ENST00000504315 SUSD4Q5VX71 490 aa17.79■□□□□ 0.44
HOXC6-203ENST00000504315 DUSP27Q5VZP5 1158 aa17.79■□□□□ 0.44
HOXC6-203ENST00000504315 COPS6Q7L5N1 327 aa17.79■□□□□ 0.44
HOXC6-203ENST00000504315 C7orf43Q8WVR3 580 aa17.79■□□□□ 0.44
HOXC6-203ENST00000504315 NECTIN2Q92692 538 aa17.79■□□□□ 0.44
HOXC6-203ENST00000504315 CHPF2Q9P2E5 772 aa17.79■□□□□ 0.44
HOXC6-203ENST00000504315 FAM177BA6PVY3 158 aa17.78■□□□□ 0.44
HOXC6-203ENST00000504315 C21orf2O43822 256 aa17.78■□□□□ 0.44
HOXC6-203ENST00000504315 GPTP24298 496 aa17.78■□□□□ 0.44
HOXC6-203ENST00000504315 SOGA3Q5TF21 947 aa17.78■□□□□ 0.44
HOXC6-203ENST00000504315 NUTM1Q86Y26 1132 aa17.78■□□□□ 0.44
HOXC6-203ENST00000504315 XAGE3Q8WTP9 111 aa17.78■□□□□ 0.44
HOXC6-203ENST00000504315 DBF4Q9UBU7 674 aaPredicted RBP17.78■□□□□ 0.44
HOXC6-203ENST00000504315 TAF1P21675 1872 aa17.78■□□□□ 0.44
HOXC6-203ENST00000504315 RNF123Q5XPI4 1314 aa17.77■□□□□ 0.44
HOXC6-203ENST00000504315 GTF2E1P29083 439 aaPredicted RBP17.77■□□□□ 0.44
HOXC6-203ENST00000504315 ERFEQ4G0M1 354 aa17.77■□□□□ 0.44
HOXC6-203ENST00000504315 HSP90AB3PQ58FF7 597 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms