RNA–Protein interactions for RNA: ENST00000503337.1

ABCC3-205, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 1 (best)

Gene ABCC3, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-205ENST00000503337 PRPF40AO75400 957 aaKnown RBP16.77■□□□□ 0.27
ABCC3-205ENST00000503337 BRD1O95696 1058 aa16.77■□□□□ 0.27
ABCC3-205ENST00000503337 LMOD2Q6P5Q4 547 aa16.77■□□□□ 0.27
ABCC3-205ENST00000503337 CLASRPQ8N2M8 674 aaKnown RBP16.77■□□□□ 0.27
ABCC3-205ENST00000503337 PODXL2Q9NZ53 605 aa16.77■□□□□ 0.27
ABCC3-205ENST00000503337 ADAMTS7Q9UKP4 1686 aa16.77■□□□□ 0.27
ABCC3-205ENST00000503337 HEG1Q9ULI3 1381 aa16.76■□□□□ 0.27
ABCC3-205ENST00000503337 ZSCAN23Q3MJ62 389 aa16.76■□□□□ 0.27
ABCC3-205ENST00000503337 MAP3K2Q9Y2U5 619 aa16.76■□□□□ 0.27
ABCC3-205ENST00000503337 GIGYF1O75420 1035 aaPredicted RBP16.76■□□□□ 0.27
ABCC3-205ENST00000503337 ESPNB1AK53 854 aa16.75■□□□□ 0.27
ABCC3-205ENST00000503337 PPP1R9BQ96SB3 815 aa16.75■□□□□ 0.27
ABCC3-205ENST00000503337 DIAPH3Q9NSV4 1193 aa16.74■□□□□ 0.27
ABCC3-205ENST00000503337 PLEKHG5O94827 1062 aa16.73■□□□□ 0.27
ABCC3-205ENST00000503337 MAP4K4O95819 1239 aaPredicted RBP16.73■□□□□ 0.27
ABCC3-205ENST00000503337 ANXA1P04083 346 aa16.73■□□□□ 0.27
ABCC3-205ENST00000503337 WDR33Q9C0J8 1336 aaKnown RBP16.73■□□□□ 0.27
ABCC3-205ENST00000503337 LINS1Q8NG48 757 aa16.73■□□□□ 0.27
ABCC3-205ENST00000503337 UPF3BQ9BZI7 483 aaKnown RBP16.73■□□□□ 0.27
ABCC3-205ENST00000503337 LSG1Q9H089 658 aaKnown RBP16.73■□□□□ 0.27
ABCC3-205ENST00000503337 ECHDC1Q9NTX5 307 aa16.73■□□□□ 0.27
ABCC3-205ENST00000503337 TNS3Q68CZ2 1445 aa16.73■□□□□ 0.27
ABCC3-205ENST00000503337 IFIT2P09913 472 aaKnown RBP16.72■□□□□ 0.27
ABCC3-205ENST00000503337 NOL8Q76FK4 1167 aaKnown RBP16.72■□□□□ 0.27
ABCC3-205ENST00000503337 RRP9O43818 475 aaKnown RBP16.72■□□□□ 0.27
ABCC3-205ENST00000503337 SYAP1Q96A49 352 aaPredicted RBP16.72■□□□□ 0.27
ABCC3-205ENST00000503337 DDX21Q9NR30 783 aaKnown RBP eCLIP16.72■□□□□ 0.27
ABCC3-205ENST00000503337 NHSL1Q5SYE7 1610 aa16.71■□□□□ 0.27
ABCC3-205ENST00000503337 GPT2Q8TD30 523 aa16.71■□□□□ 0.27
ABCC3-205ENST00000503337 SNX14Q9Y5W7 946 aa16.71■□□□□ 0.27
ABCC3-205ENST00000503337 ABCC6O95255 1503 aa16.71■□□□□ 0.27
ABCC3-205ENST00000503337 UTYO14607 1347 aa16.71■□□□□ 0.27
ABCC3-205ENST00000503337 HIP1O00291 1037 aa16.71■□□□□ 0.27
ABCC3-205ENST00000503337 HSP90AA2PQ14568 343 aaPredicted RBP16.71■□□□□ 0.27
ABCC3-205ENST00000503337 PLEKHG2Q9H7P9 1386 aa16.7■□□□□ 0.26
ABCC3-205ENST00000503337 GRM8O00222 908 aa16.7■□□□□ 0.26
ABCC3-205ENST00000503337 IL25Q9H293 177 aa16.7■□□□□ 0.26
ABCC3-205ENST00000503337 ROBO1Q9Y6N7 1651 aa16.7■□□□□ 0.26
ABCC3-205ENST00000503337 SPATA31A3Q5VYP0 1347 aa16.7■□□□□ 0.26
ABCC3-205ENST00000503337 FOXD4L5Q5VV16 416 aaPredicted RBP16.7■□□□□ 0.26
ABCC3-205ENST00000503337 FOXD4L4Q8WXT5 416 aaPredicted RBP16.7■□□□□ 0.26
ABCC3-205ENST00000503337 RAPGEF4Q8WZA2 1011 aa16.7■□□□□ 0.26
ABCC3-205ENST00000503337 EVI5LQ96CN4 794 aa16.7■□□□□ 0.26
ABCC3-205ENST00000503337 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.7■□□□□ 0.26
ABCC3-205ENST00000503337 SCN11AQ9UI33 1791 aa16.69■□□□□ 0.26
ABCC3-205ENST00000503337 RGPD5Q99666 1765 aa16.69■□□□□ 0.26
ABCC3-205ENST00000503337 G3BP1Q13283 466 aaKnown RBP eCLIP16.69■□□□□ 0.26
ABCC3-205ENST00000503337 PROSER3Q2NL68 480 aa16.69■□□□□ 0.26
ABCC3-205ENST00000503337 LRSAM1Q6UWE0 723 aa16.69■□□□□ 0.26
ABCC3-205ENST00000503337 CWC27Q6UX04 472 aaKnown RBP16.69■□□□□ 0.26
ABCC3-205ENST00000503337 ERBB3P21860 1342 aa16.69■□□□□ 0.26
ABCC3-205ENST00000503337 NEXNQ0ZGT2 675 aa16.68■□□□□ 0.26
ABCC3-205ENST00000503337 LARP1Q6PKG0 1096 aaKnown RBP16.68■□□□□ 0.26
ABCC3-205ENST00000503337 LIMCH1Q9UPQ0 1083 aa16.68■□□□□ 0.26
ABCC3-205ENST00000503337 SOS2Q07890 1332 aaPredicted RBP16.68■□□□□ 0.26
ABCC3-205ENST00000503337 TATP17735 454 aaPredicted RBP16.68■□□□□ 0.26
ABCC3-205ENST00000503337 TTC14Q96N46 770 aa16.68■□□□□ 0.26
ABCC3-205ENST00000503337 AACSQ86V21 672 aa16.67■□□□□ 0.26
ABCC3-205ENST00000503337 RBM27Q9P2N5 1060 aaKnown RBP16.67■□□□□ 0.26
ABCC3-205ENST00000503337 SPG7Q9UQ90 795 aa16.67■□□□□ 0.26
ABCC3-205ENST00000503337 PHF14O94880 888 aa16.67■□□□□ 0.26
ABCC3-205ENST00000503337 CWF19L2Q2TBE0 894 aaKnown RBP16.67■□□□□ 0.26
ABCC3-205ENST00000503337 SUCLG2Q96I99 432 aa16.67■□□□□ 0.26
ABCC3-205ENST00000503337 HS1BP3Q53T59 392 aa16.66■□□□□ 0.26
ABCC3-205ENST00000503337 RIC3Q7Z5B4 369 aa16.66■□□□□ 0.26
ABCC3-205ENST00000503337 ZSCAN31Q96LW9 406 aaPredicted RBP16.66■□□□□ 0.26
ABCC3-205ENST00000503337 TM6SF1Q9BZW5 370 aa16.66■□□□□ 0.26
ABCC3-205ENST00000503337 SLC52A2Q9HAB3 445 aa16.66■□□□□ 0.26
ABCC3-205ENST00000503337 TMEM63CQ9P1W3 806 aa16.66■□□□□ 0.26
ABCC3-205ENST00000503337 AXIN2Q9Y2T1 843 aa16.66■□□□□ 0.26
ABCC3-205ENST00000503337 AK2P54819 239 aa16.66■□□□□ 0.26
ABCC3-205ENST00000503337 RBSNQ9H1K0 784 aa16.66■□□□□ 0.26
ABCC3-205ENST00000503337 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.66■□□□□ 0.261e-6■■■■□ 25.6
ABCC3-205ENST00000503337 C5P01031 1676 aa16.65■□□□□ 0.26
ABCC3-205ENST00000503337 PRIM1P49642 420 aaKnown RBP16.65■□□□□ 0.26
ABCC3-205ENST00000503337 ZNF790Q6PG37 636 aa16.65■□□□□ 0.26
ABCC3-205ENST00000503337 NAP1L5Q96NT1 182 aaPredicted RBP16.65■□□□□ 0.26
ABCC3-205ENST00000503337 PA2G4Q9UQ80 394 aaKnown RBP16.65■□□□□ 0.26
ABCC3-205ENST00000503337 ATP6V1DQ9Y5K8 247 aa16.65■□□□□ 0.26
ABCC3-205ENST00000503337 AIMP1Q12904 312 aaKnown RBP16.65■□□□□ 0.26
ABCC3-205ENST00000503337 ZSCAN30Q86W11 494 aa16.65■□□□□ 0.26
ABCC3-205ENST00000503337 KCNB2Q92953 911 aa16.65■□□□□ 0.26
ABCC3-205ENST00000503337 BICC1Q9H694 974 aaKnown RBP16.65■□□□□ 0.26
ABCC3-205ENST00000503337 SH2B1Q9NRF2 756 aaPredicted RBP16.65■□□□□ 0.26
ABCC3-205ENST00000503337 SMC3Q9UQE7 1217 aa16.65■□□□□ 0.26
ABCC3-205ENST00000503337 RPAP1Q9BWH6 1393 aaPredicted RBP16.64■□□□□ 0.25
ABCC3-205ENST00000503337 ZKSCAN1P17029 563 aaPredicted RBP16.64■□□□□ 0.25
ABCC3-205ENST00000503337 CASTP20810 708 aaKnown RBP16.64■□□□□ 0.25
ABCC3-205ENST00000503337 VPS53Q5VIR6 699 aa16.64■□□□□ 0.25
ABCC3-205ENST00000503337 TMEM87AQ8NBN3 555 aa16.64■□□□□ 0.25
ABCC3-205ENST00000503337 ERBB4Q15303 1308 aa16.64■□□□□ 0.25
ABCC3-205ENST00000503337 SYCE3A1L190 88 aa16.63■□□□□ 0.25
ABCC3-205ENST00000503337 PRAMEF22A3QJZ6 481 aa16.63■□□□□ 0.25
ABCC3-205ENST00000503337 PDIA6Q15084 440 aa16.63■□□□□ 0.25
ABCC3-205ENST00000503337 RASEFQ8IZ41 740 aa16.63■□□□□ 0.25
ABCC3-205ENST00000503337 CABLES1Q8TDN4 633 aa16.63■□□□□ 0.25
ABCC3-205ENST00000503337 PDRG1Q9NUG6 133 aa16.63■□□□□ 0.25
ABCC3-205ENST00000503337 NLRP2Q9NX02 1062 aa16.63■□□□□ 0.25
ABCC3-205ENST00000503337 CYP46A1Q9Y6A2 500 aa16.63■□□□□ 0.25
ABCC3-205ENST00000503337 CCDC171Q6TFL3 1326 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms