RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 C8orf37Q96NL8 207 aa8.42□□□□□ -1.06
HMGB1P3-201ENST00000502802 TTC24A2A3L6 582 aaPredicted RBP8.41□□□□□ -1.06
HMGB1P3-201ENST00000502802 J3QL48 77 aa8.41□□□□□ -1.06
HMGB1P3-201ENST00000502802 GPC1P35052 558 aa8.41□□□□□ -1.06
HMGB1P3-201ENST00000502802 DUSP9Q99956 384 aaKnown RBP8.41□□□□□ -1.06
HMGB1P3-201ENST00000502802 GRIP2Q9C0E4 1043 aa8.41□□□□□ -1.06
HMGB1P3-201ENST00000502802 MRS2Q9HD23 443 aa8.41□□□□□ -1.06
HMGB1P3-201ENST00000502802 SCAMP3O14828 347 aaKnown RBP8.4□□□□□ -1.06
HMGB1P3-201ENST00000502802 PCSK2P16519 638 aa8.4□□□□□ -1.06
HMGB1P3-201ENST00000502802 TXLNAP40222 546 aa8.4□□□□□ -1.06
HMGB1P3-201ENST00000502802 ENOX2Q16206 610 aaKnown RBP8.4□□□□□ -1.06
HMGB1P3-201ENST00000502802 GNASQ5JWF2 1037 aa8.4□□□□□ -1.06
HMGB1P3-201ENST00000502802 SLC27A3Q5K4L6 730 aa8.4□□□□□ -1.06
HMGB1P3-201ENST00000502802 TMC4Q7Z404 712 aa8.4□□□□□ -1.06
HMGB1P3-201ENST00000502802 TREML1Q86YW5 311 aa8.4□□□□□ -1.06
HMGB1P3-201ENST00000502802 WWC3Q9ULE0 1092 aa8.4□□□□□ -1.06
HMGB1P3-201ENST00000502802 PNMA6FA0A0J9YX94 578 aa8.39□□□□□ -1.07
HMGB1P3-201ENST00000502802 DAB2P98082 770 aa8.39□□□□□ -1.07
HMGB1P3-201ENST00000502802 ALG1LQ6GMV1 187 aa8.39□□□□□ -1.07
HMGB1P3-201ENST00000502802 CYP4X1Q8N118 509 aa8.39□□□□□ -1.07
HMGB1P3-201ENST00000502802 FAM161BQ96MY7 647 aa8.39□□□□□ -1.07
HMGB1P3-201ENST00000502802 FAM13BQ9NYF5 915 aa8.39□□□□□ -1.07
HMGB1P3-201ENST00000502802 SORBS3O60504 671 aa8.38□□□□□ -1.07
HMGB1P3-201ENST00000502802 PLA2G4AP47712 749 aa8.38□□□□□ -1.07
HMGB1P3-201ENST00000502802 RNF144AP50876 292 aaPredicted RBP8.38□□□□□ -1.07
HMGB1P3-201ENST00000502802 ZC3H6P61129 1189 aaKnown RBP8.38□□□□□ -1.07
HMGB1P3-201ENST00000502802 HIF1AQ16665 826 aa8.38□□□□□ -1.07
HMGB1P3-201ENST00000502802 MEIOBQ8N635 442 aa8.38□□□□□ -1.07
HMGB1P3-201ENST00000502802 GPR152Q8TDT2 470 aa8.38□□□□□ -1.07
HMGB1P3-201ENST00000502802 V9GY48 417 aaPredicted RBP8.38□□□□□ -1.07
HMGB1P3-201ENST00000502802 GDF9O60383 454 aa8.37□□□□□ -1.07
HMGB1P3-201ENST00000502802 RPLP1P05386 114 aaKnown RBP8.37□□□□□ -1.07
HMGB1P3-201ENST00000502802 PSMD2Q13200 908 aa8.37□□□□□ -1.07
HMGB1P3-201ENST00000502802 C4orf17Q53FE4 359 aa8.37□□□□□ -1.07
HMGB1P3-201ENST00000502802 LDLRAD1Q5T700 205 aa8.37□□□□□ -1.07
HMGB1P3-201ENST00000502802 TMEM87AQ8NBN3 555 aa8.37□□□□□ -1.07
HMGB1P3-201ENST00000502802 TTC16Q8NEE8 873 aa8.37□□□□□ -1.07
HMGB1P3-201ENST00000502802 RHPN1Q8TCX5 695 aa8.37□□□□□ -1.07
HMGB1P3-201ENST00000502802 NUDT16Q96DE0 195 aaKnown RBP8.37□□□□□ -1.07
HMGB1P3-201ENST00000502802 CSRNP1Q96S65 589 aa8.37□□□□□ -1.07
HMGB1P3-201ENST00000502802 SETDB2Q96T68 719 aa8.37□□□□□ -1.07
HMGB1P3-201ENST00000502802 RNF19AQ9NV58 838 aa8.37□□□□□ -1.07
HMGB1P3-201ENST00000502802 BCS1LQ9Y276 419 aa8.37□□□□□ -1.07
HMGB1P3-201ENST00000502802 MICAL2O94851 1124 aa8.36□□□□□ -1.07
HMGB1P3-201ENST00000502802 NEFLP07196 543 aa8.36□□□□□ -1.07
HMGB1P3-201ENST00000502802 ERCC5P28715 1186 aaPredicted RBP8.36□□□□□ -1.07
HMGB1P3-201ENST00000502802 HDLBPQ00341 1268 aaKnown RBP8.36□□□□□ -1.07
HMGB1P3-201ENST00000502802 NBPF1Q3BBV0 1214 aa8.36□□□□□ -1.07
HMGB1P3-201ENST00000502802 AIDAQ96BJ3 306 aa8.36□□□□□ -1.07
HMGB1P3-201ENST00000502802 TSEN34Q9BSV6 310 aaKnown RBP8.36□□□□□ -1.07
HMGB1P3-201ENST00000502802 TOR4AQ9NXH8 423 aa8.36□□□□□ -1.07
HMGB1P3-201ENST00000502802 ZDHHC3Q9NYG2 299 aa8.36□□□□□ -1.07
HMGB1P3-201ENST00000502802 VTI1BQ9UEU0 232 aa8.36□□□□□ -1.07
HMGB1P3-201ENST00000502802 TGFBR3LH3BV60 316 aa8.35□□□□□ -1.07
HMGB1P3-201ENST00000502802 SMPD1P17405 629 aa8.35□□□□□ -1.07
HMGB1P3-201ENST00000502802 C8orf34Q49A92 452 aa8.35□□□□□ -1.07
HMGB1P3-201ENST00000502802 C7orf43Q8WVR3 580 aa8.35□□□□□ -1.07
HMGB1P3-201ENST00000502802 INSM2Q96T92 566 aaPredicted RBP8.35□□□□□ -1.07
HMGB1P3-201ENST00000502802 GGNBP2Q9H3C7 697 aa8.35□□□□□ -1.07
HMGB1P3-201ENST00000502802 A0A0G2JS52 829 aa8.34□□□□□ -1.07
HMGB1P3-201ENST00000502802 SPATA31C2B4DYI2 1134 aa8.34□□□□□ -1.07
HMGB1P3-201ENST00000502802 FBF1Q8TES7 1133 aa8.34□□□□□ -1.07
HMGB1P3-201ENST00000502802 PIK3R5Q8WYR1 880 aa8.34□□□□□ -1.07
HMGB1P3-201ENST00000502802 DRC1Q96MC2 740 aa8.34□□□□□ -1.07
HMGB1P3-201ENST00000502802 GPC6Q9Y625 555 aaPredicted RBP8.34□□□□□ -1.07
HMGB1P3-201ENST00000502802 TNFRSF10AO00220 468 aa8.33□□□□□ -1.08
HMGB1P3-201ENST00000502802 SPINT1O43278 529 aa8.33□□□□□ -1.08
HMGB1P3-201ENST00000502802 TATP17735 454 aaPredicted RBP8.33□□□□□ -1.08
HMGB1P3-201ENST00000502802 GNA15P30679 374 aa8.33□□□□□ -1.08
HMGB1P3-201ENST00000502802 ORC1Q13415 861 aa8.33□□□□□ -1.08
HMGB1P3-201ENST00000502802 NAALADL2Q58DX5 795 aa8.33□□□□□ -1.08
HMGB1P3-201ENST00000502802 IER5Q5VY09 327 aa8.33□□□□□ -1.08
HMGB1P3-201ENST00000502802 SREK1Q8WXA9 508 aaKnown RBP8.33□□□□□ -1.08
HMGB1P3-201ENST00000502802 SUSD3Q96L08 255 aa8.33□□□□□ -1.08
HMGB1P3-201ENST00000502802 FRMD6Q96NE9 622 aa8.33□□□□□ -1.08
HMGB1P3-201ENST00000502802 CFHR5Q9BXR6 569 aa8.33□□□□□ -1.08
HMGB1P3-201ENST00000502802 DNAJC25Q9H1X3 360 aa8.33□□□□□ -1.08
HMGB1P3-201ENST00000502802 POLMQ9NP87 494 aaPredicted RBP8.33□□□□□ -1.08
HMGB1P3-201ENST00000502802 A6NHS1 94 aa8.32□□□□□ -1.08
HMGB1P3-201ENST00000502802 EIF1AYO14602 144 aaKnown RBP8.32□□□□□ -1.08
HMGB1P3-201ENST00000502802 PHKA2P46019 1235 aa8.32□□□□□ -1.08
HMGB1P3-201ENST00000502802 C9orf131Q5VYM1 1079 aa8.32□□□□□ -1.08
HMGB1P3-201ENST00000502802 METTL5Q9NRN9 209 aaKnown RBP8.32□□□□□ -1.08
HMGB1P3-201ENST00000502802 ANKIB1Q9P2G1 1089 aa8.32□□□□□ -1.08
HMGB1P3-201ENST00000502802 DMGDHQ9UI17 866 aaKnown RBP8.32□□□□□ -1.08
HMGB1P3-201ENST00000502802 OPLAHO14841 1288 aa8.31□□□□□ -1.08
HMGB1P3-201ENST00000502802 UPP2O95045 317 aa8.31□□□□□ -1.08
HMGB1P3-201ENST00000502802 CTSOP43234 321 aaPredicted RBP8.31□□□□□ -1.08
HMGB1P3-201ENST00000502802 IDH3AP50213 366 aa8.31□□□□□ -1.08
HMGB1P3-201ENST00000502802 LINC00528Q8N1L1 170 aa8.31□□□□□ -1.08
HMGB1P3-201ENST00000502802 HPS1Q92902 700 aa8.31□□□□□ -1.08
HMGB1P3-201ENST00000502802 RNF34Q969K3 372 aa8.31□□□□□ -1.08
HMGB1P3-201ENST00000502802 AK5Q9Y6K8 562 aa8.31□□□□□ -1.08
HMGB1P3-201ENST00000502802 CPNE3O75131 537 aaKnown RBP8.3□□□□□ -1.08
HMGB1P3-201ENST00000502802 FANCCQ00597 558 aa8.3□□□□□ -1.08
HMGB1P3-201ENST00000502802 POU4F2Q12837 409 aa8.3□□□□□ -1.08
HMGB1P3-201ENST00000502802 BICDL1Q6ZP65 573 aa8.3□□□□□ -1.08
HMGB1P3-201ENST00000502802 METTL16Q86W50 562 aaKnown RBP8.3□□□□□ -1.08
HMGB1P3-201ENST00000502802 ZNF280CQ8ND82 737 aa8.3□□□□□ -1.08
HMGB1P3-201ENST00000502802 SPG7Q9UQ90 795 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms